Phanerochaete carnosa: PHACADRAFT_203923
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Entry
PHACADRAFT_203923 CDS
T03128
Name
(RefSeq) hypothetical protein
KO
K14780
ATP-dependent RNA helicase DHX37/DHR1 [EC:
5.6.2.6
]
Organism
pco
Phanerochaete carnosa
Brite
KEGG Orthology (KO) [BR:
pco00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pco03009
]
PHACADRAFT_203923
Enzymes [BR:
pco01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
PHACADRAFT_203923
Ribosome biogenesis [BR:
pco03009
]
Eukaryotic type
90S particles
Helicases
PHACADRAFT_203923
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
Helicase_C
DEAD
HA2_N
AAA_22
ResIII
AAA_23
AAA_19
Cas3-like_C_2
nSTAND3
ATPase
Motif
Other DBs
NCBI-GeneID:
18912241
NCBI-ProteinID:
XP_007390217
JGI:
Phaca1_203923
UniProt:
K5VCV6
LinkDB
All DBs
Position
Unknown
AA seq
1239 aa
AA seq
DB search
MYTRERHNARARQSTASQRKKGKRKAISSPVEEPDYDPNAEVIVSKSEEQRQLDRKERLK
HELLAQQDSKVNSKKKKRLEKYIDKKLKQEERVALFEKLSKSQARGTSALGLKSSSTLGT
GKAVTHQERIAKEEHHEVKRALEGSTGRKKRKRPYRSYTGAATDSEDEQDAPTGEDGRSS
PSAAPEPESGKTRANPVVIVDSGFSTVKQEPILTPAVNVSYIGSALKRAPDGSAIAPRVV
KKQAKSRAAPSSWKAGLAKTVVEEESDSSFDSSDSAYDSDTDNKDNDQTDDGAASRSEPA
GESDNARNETPEEVSTSPKKRLGFKDWALKQLSAAKGYVAPPTDEASSLPPLSAPEKPVP
PPPKKRKVELSQPGEMRGPLGKDIVLPLTSFAKYLQESAKDGHRRKVIEVKRPPEVEEAR
FMLPIVVEEQPIMEAILLNGVVIVCGETGSGKTTQVPQFLYEAGFGSPGSDNPGMIGVTQ
PRRVAAMSMASRVAHELSLTSSKVSYQIRYDATVSPDTFIKFMTDGVLLRELATDFLLTK
YSVIIIDEAHERSMNTDILIGVLSRVIKLREEMWVQKKDDVKPLRLIIMSATLRVSDFAE
NTTLFSTPPPIINVPARQHSVTVHFSRRTASDYVTEAIKKASKIHARLPAGGILIFLTGR
NEIAGACKKLEARYGAMAIAERGRRRSASAVATNVSSMTTGEGKKTSVAPAQADVEAEDM
DLGIDQKDLALDVDGDNADVDVDDEALDSDDELNNQELGIDTEESEVPMHIVPLYALLPN
EKQMQVFKPPPEGHRLVVVSTNVAETSLTIPNICYVIDCGRAKERRYDHANSVQSFQVSW
ISKASAAQRAGRAGRTGPGHCYRLYSSAIFETYFEQFSLPEILRMPIEGVVLQMKSMHVD
AVVNFPFPTPPDRLNLKKAETILTCLGALSIPESGAAAGGQITDVGRAMALFPLSPRFSR
MLVSGRQHGCLPYVIVIVSALSVGDPFLREEALDQDESSDEKDEDLSHIQSEAVRAKESR
RLRRKAFFESQEIHASLGQHTSDVFRVLSAVGAYEYAGGGHKFCTDHFVRPKAMEEIHKL
RAQISSIVHTNYPDTDPGFVPNLRPPNSLQLLTAGFIDQVAVRKDRAEKESASGDQYTTS
RGVPYRAMGIDEDVYIHPSSVLANQPPSEFVVFLEVVRTSKVWIKGLTVVNPAWLSQLGR
SLCTFSKPVRTKEGVSVVVPHFGPAGWELPPVKENKIEY
NT seq
3720 nt
NT seq
+upstream
nt +downstream
nt
atgtacactcgggagagacataatgccagagcacgccagtcgactgcgagccagagaaag
aagggcaagcgcaaggcgatctcgtccccggtagaggaacccgactacgacccgaatgcc
gaggttattgtctctaaatctgaggaacaaaggcagctggacaggaaggaacgactgaag
catgaactattagctcagcaggactctaaagtcaatagcaagaagaagaagcggttagag
aaatatattgacaagaaactcaagcaagaagagcgtgtggcgctattcgagaagctctca
aagagccaagctcgcggaacctctgctttagggcttaaatcttcctcgacacttggaacg
gggaaggcagtcacccaccaggaacgtattgcgaaagaagaacatcatgaagtcaagcgc
gccctggagggttcaactggcagaaaaaagcgtaaacgtccttacagatcatatacgggc
gctgccaccgacagcgaagacgaacaagatgcccctacaggcgaagatggccgttctagt
ccttctgccgcaccagagccagagtcagggaagacaagagccaacccagttgtcattgtt
gactctgggttctccacggtcaagcaggagcctatactcaccccggccgtaaatgtctcc
tacattggctcagccttgaagagggccccggatggctccgccattgccccacgagttgtg
aagaagcaagccaagtccagggctgcaccttcttcttggaaagcgggcctcgcgaagact
gtggtcgaagaagaatctgatagctcgttcgacagctcagattcggcatacgattctgac
acggacaacaaggacaatgaccaaaccgatgatggggccgcctcccgtagcgagcctgcg
ggagaaagcgacaatgcaaggaatgagacgcctgaagaagtgtccacctcgccaaagaaa
aggctaggattcaaagactgggctttaaagcagcttagcgccgccaaaggatacgttgca
ccacccacagatgaagcgagttcgctgcctccgctgtctgctccagaaaaaccagtacct
ccaccgccgaagaaacgaaaggtggaactctcgcaacctggcgagatgcgtggccctcta
ggcaaagatatcgttcttcccttgacgtcgtttgcgaagtatttgcaggagtccgccaag
gacggtcatcgacggaaggtaatcgaagtcaagcgccctccagaagtcgaggaggcgaga
tttatgcttcccatcgttgtagaggaacagccaatcatggaagccatactcctcaacggt
gttgtcatagtttgcggcgagaccggaagtggaaagacgactcaggttccccagttcttg
tatgaagcaggcttcggctccccaggaagtgataatcctgggatgattggtgttacccaa
ccgcgtcgtgtggctgctatgtccatggcatctcgcgttgcgcacgagctttcccttacc
tcctccaaagtttcctaccagatcagatacgacgctactgtatcgcccgacaccttcatc
aagtttatgacggacggtgtcttgttacgagagctggcgacagacttcctacttacaaaa
tattccgtcatcatcattgatgaagcacacgagaggagcatgaacactgacatcctcatt
ggtgtattgagtcgtgtcatcaagctacgcgaagaaatgtgggttcagaaaaaggacgac
gtcaagcctttacgcctcattatcatgtctgccactcttcgcgtatccgacttcgccgaa
aatacgactctcttctctactccgccacccatcatcaacgtccccgcccgacaacactcc
gttactgttcacttcagccgacgtaccgcctccgactacgtcacggaagccatcaagaaa
gcgagcaaaatacatgctcgcttgcctgcagggggtatactgatattcttaacgggccgg
aacgagattgctggcgcctgcaagaagctggaggctcgctatggcgcgatggcaatagca
gagagaggacggcgaaggagcgcttccgcggtagcgacaaacgtctcaagtatgactaca
ggcgaaggcaaaaagaccagtgtagctcctgctcaagctgatgtggaggcggaagacatg
gaccttggaattgaccagaaggatctggctctcgacgtagatggcgacaacgccgatgtc
gacgtggacgacgaagccctggatagtgatgatgaactgaacaatcaagaactcggcatt
gatactgaggagtctgaagtccctatgcatatcgttccgctgtatgccctcttaccgaat
gagaagcaaatgcaggtattcaagcccccgcccgaaggacatcgccttgtcgtagtatcg
acgaatgttgcggagacgtctctgaccatcccgaatatttgttacgttatcgattgtggt
agagccaaagagaggcgttacgatcacgcaaacagtgtccaaagcttccaggttagctgg
atctctaaagcgtccgctgcacagcgggccggtcgtgcggggcgtacaggtccaggtcat
tgttatcgactctactcttctgcaatcttcgaaacgtacttcgagcaattctcgctgccg
gagatccttcgcatgccgattgagggagtcgtccttcagatgaagagcatgcacgtcgac
gcggtcgtcaacttccccttccccaccccacccgatcgcttgaatctcaagaaggcagag
acgatcctgacctgcctgggtgcactctcaattccggagtcgggcgccgctgccggtggg
cagattactgacgttggccgagcaatggctctcttccctctctcgccgcggttttcccgg
atgttggtcagcggcaggcagcatgggtgtctgccctatgtcatcgtaattgtgtccgcg
ttatctgtaggagaccccttcctgcgagaagaggcccttgatcaggacgaatcgtctgac
gaaaaggacgaagatctctcgcacatccagagtgaagctgtcagggcgaaggagtcccgt
cgtttacgtcgcaaagcgttcttcgaatctcaggagatccatgcctctctaggccagcat
acgagcgatgtcttccgcgtgctatccgccgtaggagcctacgagtatgccggaggtggt
cacaagttctgcacagaccactttgttaggcccaaggcaatggaagaaatccataagctc
cgcgcgcagattagcagcatcgtgcacacgaattatccggacacagatcctggtttcgtc
ccgaatttgcgtccgccaaacagtcttcagctgcttacggctggcttcatcgaccaggtc
gccgtccggaaggacagggccgagaaggagtctgcgtcgggtgaccaatacacaacgtca
aggggcgtgccctatcgcgcgatgggcatcgacgaagatgtatacatccacccatcgtcc
gtcctggcaaatcagccgccatccgagtttgtcgttttcttggaagtagtgcgtacgtca
aaggtctggataaagggcctgactgttgtcaatcccgcatggctgtcgcaattgggcagg
tcactctgtactttctcgaagcccgtcagaacgaaggagggtgtttccgtcgtcgttccg
cactttgggcctgcgggatgggagcttcctccagtaaaagagaacaaaatagaatattag
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integrated database retrieval system
