Phanerochaete carnosa: PHACADRAFT_207767
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Entry
PHACADRAFT_207767 CDS
T03128
Name
(RefSeq) hypothetical protein
KO
K08735
DNA mismatch repair protein MSH2
Organism
pco
Phanerochaete carnosa
Pathway
pco03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pco00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
PHACADRAFT_207767
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pco03400
]
PHACADRAFT_207767
DNA repair and recombination proteins [BR:
pco03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
PHACADRAFT_207767
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_IV
MutS_II
MutS_I
AAA_27
Motif
Other DBs
NCBI-GeneID:
18912659
NCBI-ProteinID:
XP_007394393
JGI:
Phaca1_207767
UniProt:
K5VY92
LinkDB
All DBs
Position
Unknown
AA seq
988 aa
AA seq
DB search
MALMYGKEKDADFEIGKLKTYNVSHPGFCSFFKKLPAKSPETGTIRLFNRGDYYSVHGPD
ALYIATHVYHTNTVVKYLGPGGRNGLPSVTLSENSAKMFLREALTARQLKVEIWVPEAGQ
GKRATKFTLDKEASPGNLQDVEEMLFGNVDITTAPIVMAIRVASTPAAPGAPANAKTKQV
GVAFADTSTRELGVADFVDNDLFSNTETLIIQLAVKEAILPTGTQSGATERDVDLKKLRA
VLERCNVVITERKPSEFNSRNIQDDLMRLLSPSSIPSSSTGVDAASIVPQLSLPAAPASL
AALTTYLSLLSDPTNHGAYTIRTHDLTQFMRLDASALRALNLIDAPGNVGANKNATLLGL
LNKCKTAQGSRLLASWLKQPLVNLHEIRNRQNLVDVFVQDPNSRRLLQEEQLKMLPDMHR
ICKKFQKSVATLEDVVRVYQAVLKLEGLVKNIESIDTTDEYKVLIDETYLTKLKEFEVSL
SKYSDMVQDTLDLDELENHNFVVKPEYDPYLEELAQKLKGVRDELDAEHRRIAAELELDL
DKKLHLENSVNWGYCFRISKLDSKKIEKNRRAYHELGTQKSGMFFTTSPLRELAEEYRET
VAKYKAKQSKLVGEIVAIAATYTPILEQWNGVIAHLDVIISFAHVAVNAPEPYTKPEVLE
RGTGGMVLKDARHPCLEVQDDVSFIPNDVEMIKDESEFQIITGPNMGGKSTYIRQVGVIA
LLAQTGSWVPCSEARLPVFDSVLCRVGAGDSQLRGVSTFMAEMLETANILRSATQDSLII
IDELGRGTSTYDGFGLAWAISEHIASTIHAFCLFATHFHELTTLAQQLPHVKNLHVVAHV
SSADGAEDEGVAQKKDMTLLYKVAPGVCDQSFGIHVAELANFPERVVRLAKRKADELEDF
NAEDRMQTELDPSVVEDGTALVEELLKAWSDSVSTHSDAYDVFMADAEGEDGEGDPEAQL
AELKRCIEQFRPRLESNAWVQQVLTSLT
NT seq
2967 nt
NT seq
+upstream
nt +downstream
nt
atggcgctgatgtacgggaaagaaaaggatgcagattttgagattggcaagttgaaaaca
tacaacgtttcacatcctggattctgcagtttcttcaaaaaattgccagcaaagtctcct
gaaacaggcaccatccgtctcttcaaccgcggcgactactactccgtacacggtccagat
gcactctatattgcaacccatgtttatcataccaacaccgtcgtgaaatatcttggtcct
ggcggtcgtaatggtctgcccagtgttacgcttagcgagaactcggccaaaatgtttctt
agggaagctctaaccgctcgccagctcaaggttgagatttgggtaccagaagcagggcag
ggcaagcgggcgaccaagtttacactagacaaagaggcttctccagggaacttgcaagat
gtggaagaaatgctcttcggaaatgtggatataacgactgctcccatcgtcatggctatt
cgggtcgcgtctacgccagctgcaccgggtgcaccggcgaatgcgaagactaagcaagtt
ggtgtcgcttttgctgacacaagcactcgggaactaggagttgcagacttcgtcgataac
gatctcttctcaaatactgaaactttgattattcaactggctgtcaaggaagcaattcta
cccaccggcacccagtctggagctactgagcgagatgttgacctcaagaagctcagagct
gtgctcgagcgctgcaatgttgttattacagaacgcaaaccaagcgagttcaattcgagg
aacattcaggacgatctcatgcgcctcctgagtccaagctcgataccgtcctcatctact
ggcgttgacgcagcttcaatcgttccgcaactcagccttccagcagcaccggcctcgctg
gcagcactcacaacctacctctccctgctttccgacccaaccaaccacggcgcatacacc
atccgcacgcacgacctaacacagtttatgcgactcgatgcgagtgcgcttcgcgcgttg
aatctcatcgacgctccaggcaacgtaggcgcaaacaaaaacgcgacactactcggcctt
ctgaacaagtgcaagacggcgcaaggttcgagactgctcgctagctggcttaagcaaccc
ctcgtcaacctgcacgagattcgtaaccggcagaatttggtagatgtcttcgtccaggac
ccgaactcacgaaggctgctgcaggaggaacagctgaaaatgttgccagacatgcataga
atctgcaagaagttccagaagtctgtcgcgacgctggaggacgttgttcgtgtatatcag
gctgtgctcaagcttgaaggcttggtgaagaacattgaaagcattgataccaccgacgag
tacaaggtccttattgacgaaacatatcttaccaagcttaaggaattcgaagtttccctg
tccaagtactccgacatggtgcaggacacgctcgacctcgacgagctcgagaaccacaac
tttgtagtcaagcccgagtacgacccgtacctcgaggaactcgcacaaaagctgaaggga
gtgcgcgacgagctcgatgcggagcaccggcgcatcgcggccgagctggagctcgacctc
gacaagaagctccacctcgagaactcagtcaactgggggtattgcttccgcatatcgaag
ctcgactcaaagaaaatcgaaaagaaccggcgggcgtaccacgagctcggcacgcaaaag
agtggcatgttcttcacgacgagccccctcagagagctggcagaggagtaccgcgagaca
gttgcgaagtacaaggcgaagcagagcaagcttgttggcgagattgtggctatcgcggcg
acgtacacgcctatccttgagcagtggaatggggttattgcgcatctggacgttattatt
agctttgcacacgttgcggtgaatgcaccggagccctacactaaacctgaagtactagag
agaggcaccggcggtatggtcctgaaagatgctcggcacccatgcctggaggttcaagac
gacgttagcttcatcccgaacgacgttgaaatgatcaaagatgagagcgaattccaaatt
atcactggtccgaacatgggaggaaagagcacgtacattcggcaggtcggcgttatcgcg
ttgcttgcgcagacaggcagctgggtgccttgtagcgaggcacgtttgccggtcttcgac
tccgtactttgccgcgtcggcgctggcgacagccagctccgcggcgtgtcgacgttcatg
gcagagatgcttgagacggcaaacatcctccgaagtgcaacgcaagattcgctgattatc
atcgatgagcttggacgaggcacgtctacctacgacggcttcggcctcgcctgggccatc
tccgaacacatcgcctcgacgatccacgccttctgcctcttcgcgacgcacttccacgag
ctcacgacgctcgcccagcagctgccgcacgtcaagaacctgcacgtcgtcgcgcacgtc
tcctctgccgacggcgcagaggatgagggcgtggcgcagaaaaaggacatgacgctcctc
tacaaggtcgcgccgggcgtatgtgaccagagcttcggcatccacgtcgccgagctcgcc
aacttccccgagcgcgtcgtccgcctcgcgaaacgcaaggccgacgagctcgaggacttc
aacgcagaggaccgaatgcaaaccgagctcgatccgtccgtggtcgaagacggcacggcg
ctcgtcgaggagctcctcaaagcctggtccgactccgtgtcgacgcacagcgacgcctac
gacgtcttcatggctgacgccgaaggcgaggacggcgagggcgaccccgaggcgcagctc
gccgagctcaagcgctgcatagaacagtttcggcctaggctcgagagcaacgcgtgggta
caacaggtgctaacatccctaacctga
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