Phanerochaete carnosa: PHACADRAFT_207913
Help
Entry
PHACADRAFT_207913 CDS
T03128
Name
(RefSeq) hypothetical protein
KO
K10865
double-strand break repair protein MRE11
Organism
pco
Phanerochaete carnosa
Pathway
pco03440
Homologous recombination
pco03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
pco00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
PHACADRAFT_207913
03450 Non-homologous end-joining
PHACADRAFT_207913
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pco03032
]
PHACADRAFT_207913
03400 DNA repair and recombination proteins [BR:
pco03400
]
PHACADRAFT_207913
DNA replication proteins [BR:
pco03032
]
Eukaryotic type
DNA Replication Termination Factors
MRN complex
PHACADRAFT_207913
DNA repair and recombination proteins [BR:
pco03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
MRN(MRX) complex
PHACADRAFT_207913
BRCA1-C complex
PHACADRAFT_207913
NHEJ (non-homologous end-joining)
MRX complex
PHACADRAFT_207913
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Mre11_DNA_bind
Metallophos
Metallophos_2
Motif
Other DBs
NCBI-GeneID:
18912678
NCBI-ProteinID:
XP_007394558
JGI:
Phaca1_207913
UniProt:
K5X1R2
LinkDB
All DBs
Position
Unknown
AA seq
712 aa
AA seq
DB search
MSPHLPSSTQGVTGTMSGGNAFSEDTFRILVATDNHIGYMERDAIRGQDSIDTFREILQL
AVKNDVDFLLLAGDLFHENRPSRDTLYQVMALLREYCMNDRPIQIELLSDPEEGKAPEAS
FPAINYEDPNLNIGMPVFSIHGNHDDPQGVGPKGALAALDMLSVGGLVNYIGKFDLSSSA
TSTEDNGIIIKPVLLRKGNSRLGLYGVGNVKDARMHFELRSNRVKMYMPKDKDDWFNILL
LHQNRVPHGPQQSVPEAMFDDSIDFVIWGHEHDCRVEPEVVEGKRYRICQPGSSVATSLS
AGESLEKHVALMEIHGKEYRLTPIPLRTVRPFIMDELVLEEAAEQEGVNVNDRMETAKIL
KSAVEALIEKAYKAWDERNEQALQLGEPEIPRMLPLIRLKVDTTGVTETINPVRLSQEFQ
GRVANPRDVFIFNRAKQQRQAKVHMEEPDLSIDDPDLTTQEKLHKVRMHTLVQEYLEAQQ
VQVLAEPGMSDALEMFINKDDIHSFESHYRNTLKNMQKGVQVDVSEDNIEEDDLNALVEK
AREKLEKEYVKKNVGSSANGKGKAKAQQEKGGDSDDSMLMDMGVATHAQPDSDEEEEEEA
APKKTATRGKKAAPTKKAPAKKAPAKRGKKAASSDDEEDNFEQEEDEEEEEEKKTKKRAA
ATTKAKKAPAKKAAASSSKQATLSFAPSQRAPRAAATRGRKKTAEVVDDSDD
NT seq
2139 nt
NT seq
+upstream
nt +downstream
nt
atgtctccccatctaccatctagcacacaaggagtgacaggaactatgtccggcgggaac
gccttttctgaggataccttccggatattggtcgccacagacaaccacatagggtacatg
gaacgagatgccatacgtggccaggactctatcgacactttcagagagatattgcagttg
gcggtcaagaacgatgtcgactttcttttacttgcaggagatctcttccacgaaaaccgt
ccctctcgagatacactataccaggtgatggcgctcctccgggagtactgtatgaacgat
cgccctattcagatcgagcttttgagcgacccagaagaaggaaaggctcccgaggcttct
ttcccggctataaactacgaagatcccaacttaaatatcggaatgccggtgttctcgata
catggcaatcatgacgacccacaaggtgtaggcccaaaaggcgccctcgctgctcttgat
atgctttccgtgggcggcctcgtcaattacatcggcaaattcgatctctcgtccagtgcg
acgagcacagaggataatggaattattatcaagcctgtgctgcttcgcaagggtaactca
cgactgggcttgtacggcgtcggcaatgtcaaggacgcacgaatgcacttcgaacttcga
agcaaccgtgttaagatgtacatgcccaaggacaaggatgactggttcaacatcctactt
ctgcaccagaatcgtgtacctcacggtcctcaacagtccgtcccggaggctatgtttgat
gacagcatagacttcgttatctgggggcacgaacacgactgtcgcgttgaacctgaggta
gtcgaagggaagcggtaccggatttgtcagcctggctcttcggtcgcgacatccctttct
gccggcgagtccttggaaaagcatgtggctttgatggagatacacggtaaggagtacagg
ctgactccgatacccctacggacagtgcggcctttcattatggacgagctcgtacttgaa
gaggccgcagagcaagaaggcgtaaacgtaaacgaccggatggaaacagccaaaatcctg
aagtctgcagtagaagcgctaatcgagaaagcgtacaaggcctgggatgagcggaacgaa
caagcgctacagcttggcgagcccgaaatcccgcgcatgctccctctcatccgcctcaag
gttgacaccactggcgtcacagagacgatcaaccctgtgcggctgagccaagagttccag
ggccgcgttgcgaatccgcgggacgtcttcatcttcaatcgtgcaaagcagcagcgccag
gcgaaagttcacatggaagaaccggatctaagcatcgacgacccagacctcacaacccag
gaaaagttgcacaaggtgcggatgcacacgctcgtgcaggaatatctcgaagcgcagcag
gtacaggtccttgccgagccgggtatgtctgacgcgctcgagatgtttatcaataaggac
gacatccattcattcgagagccattacaggaacacgctcaagaacatgcagaaaggtgtt
caggtcgacgtgtctgaagacaacatcgaggaggatgatctcaatgcgctggttgagaag
gcgagggagaagctagagaaagagtacgtcaagaagaatgtaggtagctctgcgaatgga
aagggcaaggccaaggcacagcaggagaagggtggcgactccgacgactccatgttgatg
gacatgggcgttgcgactcacgcacagcccgattctgacgaggaggaagaagaagaagct
gcgcctaagaagacggcaacgaggggaaagaaagctgcgccaacgaagaaagccccagca
aaaaaggcacccgcgaagcgaggaaagaaggccgcgtcctcagacgacgaggaggacaat
tttgagcaggaggaagacgaagaagaggaggaagaaaagaagacaaagaagcgggcggct
gcgacaaccaaagcgaagaaggcaccggcgaaaaaggcggcggccagttcttcaaaacag
gctacgcttagctttgcaccttcgcagcgcgcgcctcgtgccgctgcgacccgaggtaga
aagaagacggcggaagttgttgatgacagcgatgactag
DBGET
integrated database retrieval system
