Phanerochaete carnosa: PHACADRAFT_212985
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Entry
PHACADRAFT_212985 CDS
T03128
Name
(RefSeq) hypothetical protein
KO
K11593
eukaryotic translation initiation factor 2C
Organism
pco
Phanerochaete carnosa
Brite
KEGG Orthology (KO) [BR:
pco00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pco03019
]
PHACADRAFT_212985
03036 Chromosome and associated proteins [BR:
pco03036
]
PHACADRAFT_212985
Messenger RNA biogenesis [BR:
pco03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
PHACADRAFT_212985
Chromosome and associated proteins [BR:
pco03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
PHACADRAFT_212985
RNA interference (RNAi) pathway
RITS (RNA-induced transcriptional silencing) complex
PHACADRAFT_212985
microRNA pathway
RISC loading complex
PHACADRAFT_212985
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Piwi
PAZ
ArgoN
ArgoL1
ArgoL2
ArgoMid
Motif
Other DBs
NCBI-GeneID:
18913309
NCBI-ProteinID:
XP_007400242
JGI:
Phaca1_212985
UniProt:
K5VW80
LinkDB
All DBs
Position
Unknown
AA seq
999 aa
AA seq
DB search
MSGNPPRGRGRGGPQRGRGGAGGGSPAPSVSTGTGRGSNFQGDRGRGGGRGGRGGGSDFR
GGRGGGGGSGGGSSFGGGRGGGGGGGGPRGGPAEVFAAGTPARLDQRVSEMDSLIKSFGN
LKVGPEMPLRPGFGTTGRLQNLRANFFALRLPADLAIHDYEVSISPNKDLRRARKARIFD
LLESSPECAPFRDHIAHDNSARLVSAKELPQPLQATIRFYEEGESGPRDNAPVYTVEIKH
VRTLNKRDIDPKKRDFDTLPHISALNLIVQKHAAKSGIRVGGDDEQDEKKRQGKSKYFFP
AEERFPLILGLEACRGFYVSIRPNFKQLMVNINACMTAFYVPGNLAEAMLVFQQQTRTIP
SEFFEKVKVVTTHLGYPKKKAIFRIMSTTPRTTKFNHNKHGEISVEQYFKQEYKITLQHA
NSLPVIDIGSKDKANFMPPELCEIPPGQPYRGLLPDKATAEMIKVACNTPAFNASLIVNQ
GFDLLGLRGNNSTLVSFGINVDPQMAVIPGRVLPPPKVTYKSGQPNVRDGGWNILGVKFH
QGGDMTNWAVLVVTDGRYAKFQSPQDPQLVSFLQAFMGKCRASGMTVGQNLPPIMQTPQL
PPPHQDAGRTRALGIIRDTIRNGLQPQRKPSFVLVLLSLVDKFIYPGIKRLCDMQLGLQT
VCMQLDKAMKERGQDQYFSNVALKVNIKLGGVNHMLAPESMQFLTAKKTMLVGIDVTHPS
PTSLKGTPSITAVVASVDDKFVHFPAGLALQRNKNISRDSEEMVEDLTKLLVERLQLYEQ
KTRTLPERVLVYRDGVSEGQYKLSLEKELPQILDAFKKFNTAARKTPYRPTLSIIVCGKR
HHARVYATAADQTTKNGNTLPGTVVDKGITDIYNHDFYLQAHYGLQGSAKSTHYIVIYDE
NKITADQIQVGTNNASYMYARATKAVSLVPPAYYADLACERAREWLSMLMNVDSQTRSRV
SSRGDPEAERRAREQVYTEAVKQWGNGIHKDLQNTMFYI
NT seq
3000 nt
NT seq
+upstream
nt +downstream
nt
atgagcggaaacccaccgaggggacgggggcgtggaggcccacaacgaggtcgtggcggc
gccggagggggctccccggcacccagcgttagcactgggacaggacgaggaagcaacttc
caaggcgaccgaggtcgtggaggaggccgcggaggtcgtggcgggggcagcgacttccgc
ggaggtcggggcggcggaggcgggagcggtggcgggagcagctttggtggtggccgcggt
ggaggtggaggtggcggaggcccccgcggcggacctgcggaggtcttcgctgccggtacg
cctgcgaggctggatcagcgagtttccgagatggattcgctgatcaagagctttggcaac
ctcaaggtcggtccggagatgcccctgcgacctggcttcggcaccacaggcagactccag
aacctaagggccaacttcttcgcgctacgcctccccgcagacctggccatccacgactac
gaagtgtccatttccccgaacaaagatctacgcagggctcgcaaggcgcgtattttcgac
ctactcgagagtagtccggaatgcgcgcctttccgagaccatattgcgcacgacaacagc
gcgcggcttgtgtcggccaaggagttgccccagccactccaagcgactatccgcttctac
gaggaaggcgagtcgggaccacgtgacaatgcccccgtatatactgtcgagatcaagcat
gttcgcactcttaacaagcgggacatcgatccgaaaaaacgcgactttgacaccctgcca
catatatccgccctcaacctcatcgtccaaaagcatgccgccaagagcggtatccgcgtc
ggcggcgacgacgagcaggacgagaagaagcgccaaggcaagagcaagtacttcttccca
gccgaggagcgcttcccgcttatactcggtctcgaggcttgtcgtggcttctatgtttcc
attcgtcccaacttcaagcagctgatggtgaacatcaacgcctgcatgaccgccttctac
gtgcctgggaacctcgcagaggccatgctcgtctttcagcagcagaccaggaccataccc
tcggagttcttcgagaaggtgaaggttgtgacgacgcacttggggtatccgaagaagaaa
gctatcttccgcattatgagtaccacgccgcgcactacaaagttcaaccacaataagcac
ggggagatctcagtggagcagtatttcaagcaagagtacaagattacacttcagcatgcg
aactccttgccagtcatcgatatcgggagcaaggacaaggcgaatttcatgcctcctgag
ctgtgcgagatccctcccgggcagccataccgaggcctgctccccgacaaggcaacggcg
gaaatgatcaaggtcgcctgcaacacaccggcattcaacgcgagccttatcgtcaaccag
ggctttgacttgctcggcttgcggggcaataacagcaccctcgtcagctttggcatcaac
gtcgatccccagatggccgtcatcccaggtcgtgtcctccctccgccgaaagtgacgtac
aagtcaggccagcctaatgtccgcgatggtggatggaatatccttggtgtaaagttccac
cagggcggagacatgaccaactgggctgtcttagttgttaccgacggccgttatgccaag
ttccaatcgcctcaagacccgcaacttgtctcgttcctgcaggcgttcatgggcaagtgt
cgcgcgagcggtatgaccgtgggtcagaacctaccgccaatcatgcaaaccccacagctg
ccgccgcctcaccaggacgcgggtcgtacgcgtgcacttggcattattcgggatacgatc
aggaacggcttacaaccgcagcgcaagccaagtttcgtgctcgtgctgttgtccctagtc
gacaagttcatctacccaggtatcaagcgcttgtgcgacatgcagctcggcctgcagacg
gtgtgcatgcagctcgacaaggccatgaaggagcgagggcaggatcagtacttctcgaac
gtggcgttgaaggtcaatatcaagctcggcggagttaaccacatgctggcgcctgaatca
atgcagtttctcacggcgaaaaagaccatgctcgtcggcatcgacgtcacgcatccgtca
ccgaccagtcttaagggcacgccgtctatcaccgccgttgtcgcgagcgtggacgacaag
ttcgtgcacttccctgccgggcttgctctgcagcggaacaagaacatcagtagagactcc
gaagagatggtagaagatctcacgaagctcctggttgagcgtcttcagctgtacgagcag
aagacgaggacgctgcccgaacgcgttctcgtttatcgtgatggcgtgtcggagggccag
tacaagctttcgctcgaaaaagagctgccccagattctggacgctttcaagaagttcaat
accgctgcgcggaagacgccatatcgtcctacgctctctatcattgtctgcggcaagaga
catcacgctcgcgtctacgctacggctgccgaccagacaacgaagaacgggaacaccctt
ccgggcactgttgtcgataaaggcataacggacatctacaatcacgacttctaccttcag
gcacactacggccttcagggcagcgccaagtctacgcactacatcgtcatctacgacgaa
aacaagattaccgcagaccagattcaggtcggaacgaacaatgcgtcgtacatgtacgcg
cgtgcgaccaaggccgtgagcctcgtcccgccagcttactacgcggaccttgcatgcgag
cgcgcccgcgagtggttgagcatgctcatgaatgtcgatagccagacgcgctcgcgagtt
agttcgcgcggagacccagaggcagagcgccgtgcgcgcgagcaagtgtacacagaggct
gtgaaacagtggggcaatggcatccacaaagacctacagaacactatgttctacatctag
DBGET
integrated database retrieval system
