Phanerochaete carnosa: PHACADRAFT_213841
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Entry
PHACADRAFT_213841 CDS
T03128
Name
(RefSeq) hypothetical protein
KO
K02320
DNA polymerase alpha subunit A [EC:
2.7.7.7
]
Organism
pco
Phanerochaete carnosa
Pathway
pco03030
DNA replication
Brite
KEGG Orthology (KO) [BR:
pco00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
PHACADRAFT_213841
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pco03032
]
PHACADRAFT_213841
Enzymes [BR:
pco01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
PHACADRAFT_213841
DNA replication proteins [BR:
pco03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase alpha / primase complex
PHACADRAFT_213841
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol_B
zf-DNA_Pol
DNA_pol_B_exo1
DNA_pol_alpha_N
Phage_zn_bind_8
DNA_pol_B_2
Motif
Other DBs
NCBI-GeneID:
18913429
NCBI-ProteinID:
XP_007401272
JGI:
Phaca1_213841
UniProt:
K5VFX2
LinkDB
All DBs
Position
Unknown
AA seq
1452 aa
AA seq
DB search
MSDRLRRERKSKLDSLAELRRARAGGGRAYKVDGDDAIYDVVTEEQYETVVRGRLAKDDF
VVDDGIGGYMDNGMDDFDETGKYAESDEEERKPAKKKDTKPKAKGKAKPQPPPPAAPSIS
AYRRNYTEDQEQDFLGSIIGQMDSIVPKAPVTARKRKPDGGKPKARTGGYERSANYADAD
TSSDGLVDDGFPSGPPSEDDLDVFSPKKKMKTEDSGVAPAIERMGKIHMASSNGDEGDAN
MHDSFDNIDMDAFMEIDEDLLDPPSKPAPKAVKKEEVQEIKLAPSQKLKSDEKKSLDETP
AWLSVYDSLTVTKDDTLGPAAGSSAKANGSKDASVLEEDGSLRFFWLDYLEYEGKLYFIG
KTQDKKTRLWLSCCVTVENLERNLFILPRERRVEEDPETGELYETDVTPTLQDVYGDFDR
VRKKAGINGFKAKFVKRRYAFGEKDVPRTETQWLKVVYGFDQPQISANISSPNFSRVFGT
TTSAFELLVLKRKIMGPCWLQIKKPVMEHKGVSWCKVEATVTDPKDINPFPETDSNAPKE
VPPLTVMSLSMRTIVNHQANIREVVCASARIWSNLQLEDPTPPESLPCSVHTFVRPLDRF
APNFENRARMNGKGVIHPMQTERVLLNNLLASVHKADPDVIVGHDFVGDSLDVLLRRMRD
LKADHFSRIGRFRRSKWPNIGRQGTNLKFLNGRLMCDLASDSAKGMISSTTWSLMEMCKT
HLKSDRQDIDPDDTASYFDGSLSSPDRLLTFVRHCELDAHYQMALAAKVQILPLTRQLTN
LAGNSWNKTLNGGRAERNEYILLHEFHRLKYICPDKQWGKKAEAVAKAENGDGEGEGGKK
GKSKRDKYKGGLVFEPKRGLWDKFILVMDFNSLYPSIIQEYNIDFTTVEPVEDEDGEDKI
PEVPNQGTEQGVLPRLIATLVNRRRQVKSLMKDRKATQAQLLQWDIKQMALKLTANSMYG
CLGFEYSRFYARPLAALTTFKGREILTHTRELAESLQLDVVYGDTDSVFVNSNVTELAEA
LKISAEFKKAVNDRYKLLEIDLDGVFQRLLLLQKKKYAAVKVEDGTRTSVEVKGLDMKRR
EYCALSKNVSQYVLEQILSGEATETVVENVHEYLSTMSGDVRAGKVKLDEFIIFKRLGKN
PEDYPDAKSQPHVQVALRMKAKGSAARSGDVIPYIFCLGEGGESSKSAQAERAKHPDEIK
RAGSDLRIDYEYYLSQQILPPIERLCEPIEGTDRARLAECLGLDPSRYRNATGTESEGRH
FGSLDSLMSDAERFKDSEPLLMRCRACKAETAFSPIDDRSASMLTPAGVRCPACEAAIGA
ASVQVQLEVQIRAHVARYYEGWTICKDQTCGGRTRMMGVYGRRCLRPACKGIVAFEYSDA
QMYNQLRYYAHVFDVEKALKGAVSRRAVEELEGIRVTQAELLDAVQGTVDKYLAQCGRRW
VDLGALFSVIRI
NT seq
4359 nt
NT seq
+upstream
nt +downstream
nt
atgtccgacagactgcgacgagagcggaaaagcaagctcgactcgttggccgagctcaga
cgcgcgagggcaggcgggggaagagcctacaaggtggatggcgatgatgccatttacgac
gtagttacggaggaacagtacgagactgtcgtcaggggccgtcttgcaaaagatgatttt
gtagtcgacgatggtatcggcggttacatggacaatggtatggacgactttgacgagaca
ggcaagtacgcagaaagtgacgaagaggagagaaagcctgctaagaagaaagacacgaag
ccgaaagcaaagggcaaggcgaagcctcagcctccgccacctgctgcaccgtcgatctcc
gcgtatcggcgtaattatacagaggatcaggaacaagacttcctcggttctattataggc
cagatggacagcatagtacccaaggccccggtgacggcccggaaacgcaaaccagatggt
ggcaagccgaaggcacggactggaggctacgaacgaagcgcaaactatgctgacgcagac
acatcttctgatggtctcgtcgacgacggttttccgagcggccctccgagcgaagacgac
ctcgatgtcttcagtccaaagaagaagatgaagaccgaggacagcggcgtcgcaccagca
attgagcgcatgggcaagatccatatggcaagcagtaacggagacgagggcgacgcaaac
atgcacgactccttcgacaatatagacatggatgcattcatggagattgacgaagacctc
ttggacccgccctccaagcctgcgcccaaggcggttaagaaagaagaggtccaggagatc
aaactcgcaccatcacagaaactcaagtccgacgaaaaaaagtcgcttgacgagacgcct
gcttggttgtcggtgtacgactcgctaactgtcacgaaagatgatacgcttggcccggct
gcaggctcgtccgcgaaggcaaacggctccaaagacgcctcagtgctggaggaggacggc
tcgctgcgcttcttctggctggactacctggaatatgagggcaagctatacttcatcggc
aagacacaggataagaagacgaggctgtggctttcttgctgtgtcacggtcgaaaatctg
gagcggaacctgtttattttgccccgcgagcgtcgcgtagaggaggacccggagacgggc
gaattgtacgagacagatgtaacgccaactctgcaggacgtctacggcgatttcgatcgc
gttcgtaagaaagcgggtatcaatggcttcaaggccaagttcgtcaaaagacggtacgct
tttggcgagaaggacgtcccgcggactgagacgcaatggctcaaggtcgtgtatggtttc
gaccagccacaaatatcagcgaacatctctagccctaatttttcgcgagtctttggcacg
actaccagcgcgttcgagctcctggtgctcaagcgcaagatcatgggcccctgctggctc
cagatcaagaagccggtgatggagcacaaaggagtttcttggtgcaaagtggaggccacg
gtcacggatccgaaggacatcaaccccttccctgagactgactctaacgcgccaaaggaa
gtgccgccgctgaccgtcatgagcctcagcatgcgtactattgtcaaccaccaagcgaat
atccgtgaagttgtttgtgcatctgcccgaatatggtccaacctccagctcgaggacccg
acgcccccggaatcgctgccctgcagcgtccacacttttgttcgtcctctggatcggttc
gcgcccaacttcgagaacagggcgagaatgaacggcaaaggtgtcattcaccctatgcag
acggagcgcgttctgctgaacaacttgctcgcgagtgtccataaggctgacccggacgtt
atcgtcggtcacgatttcgtcggtgattccctggacgtgctcttgcgacgcatgcgtgac
ctgaaggccgaccacttctcgcgcatcggacgcttcaggcggtcgaaatggccgaacatc
ggcaggcagggcacgaacctgaagttcctgaacggcaggctgatgtgtgatctggcaagc
gatagcgccaagggcatgatctcgtcgacaacctggtcgctgatggaaatgtgcaagacg
catctcaagagcgacaggcaggacattgacccggacgacaccgccagctactttgacggg
agcctgagctcgccagaccgcctgctcacgttcgtccgacattgtgaactcgacgcgcat
taccagatggcgcttgctgcaaaggtccagatcttgcctctgacacggcagttgacgaac
ctcgccggaaactcatggaacaagaccctcaacggtggtcgtgccgagcgaaatgagtat
attctcctacacgagttccaccgtctgaaatacatctgccccgacaagcagtggggtaag
aaggctgaggcggttgctaaagccgaaaatggagacggcgaaggcgagggcggcaagaag
ggcaagagcaagagagacaaatacaagggtggtctcgtcttcgagccaaagcgcggcctg
tgggacaagttcatcctcgtcatggactttaactcgttgtatccgagtatcattcaggaa
tacaacattgactttacgacagtggagccggtagaagacgaggatggggaagacaagatc
cccgaggttccgaaccaggggaccgagcagggcgtgctcccacgacttattgccacgctc
gtcaaccgacgtcgccaggtcaagagtctcatgaaggaccgcaaggcgacgcaggcgcaa
ctgctacagtgggacatcaaacagatggcactgaagctcacggcgaacagtatgtacggt
tgtctcggcttcgagtactcgcgattctatgcccgaccgctcgccgccctcacgacgttc
aagggtcgtgagatattaacgcacacacgtgagcttgcggagagccttcaacttgatgtc
gtctatggtgacacagactccgtctttgtaaattcgaacgtaaccgagctggccgaggcc
ctcaagatctcggctgagttcaaaaaggcggttaatgaccggtacaaactgctcgagatc
gatctcgatggcgtcttccagcggctgctgctcctgcagaagaagaagtacgcggccgtt
aaggtcgaggacggcacacggacgagcgtcgaggttaagggtctcgacatgaagcgccgc
gagtactgtgcgctgtcgaagaacgtgtcgcagtacgtgctcgagcagatcctttcgggt
gaggcgacagagactgtcgtggagaacgtacacgagtacctctcgacgatgagcggtgac
gtccgggcggggaaggttaagttagatgagttcatcatcttcaagcgactaggcaagaac
ccggaagactaccccgatgcgaaaagccaaccgcacgtccaggtagcgctaaggatgaag
gctaagggaagtgctgcgcgctctggcgacgtcattccctacatattctgcctgggcgag
ggtggcgagagctctaagagcgcgcaggccgagcgcgcgaagcacccagacgaaatcaag
agggcgggcagcgacctgcggatcgactacgagtactatctctcgcaacagatccttccg
ccgatcgagcggttgtgcgagcccatcgagggaacggatcgggcgcggcttgcagagtgt
ctcggcctcgatccgagcaggtatcgcaacgcgacgggcacggagtccgaaggacgacac
ttcggctcgctcgactcactcatgtctgatgcggaacggttcaaggactcggagcccctg
cttatgcgctgccgcgcgtgcaaggccgagacggcattttcgcccatcgacgaccgcagc
gcatcgatgctgacgccggcgggcgtgcgctgccccgcgtgcgaggccgcgatcggcgcg
gcgagtgtgcaggtgcagctcgaagtgcagatccgcgcgcacgttgcgcggtactacgaa
ggctggacgatctgcaaagaccagacgtgtgggggacgcacgcgcatgatgggcgtgtac
ggacgtcggtgcctgcggcccgcgtgcaagggcatagtcgcgttcgagtattcggacgcg
cagatgtacaaccagctgcggtactatgcgcatgtgttcgacgtcgagaaggcgctcaag
ggtgccgtaagccgcagggcggtcgaagagcttgagggcatacgcgtgacccaggcggag
ctcctcgacgctgtgcagggcaccgtcgacaaatacctcgcgcagtgcgggcggcgatgg
gtcgatctcggggcgctgttctcggtcattcggatatga
DBGET
integrated database retrieval system
