Phanerochaete carnosa: PHACADRAFT_214459
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Entry
PHACADRAFT_214459 CDS
T03128
Name
(RefSeq) hypothetical protein
KO
K10609
cullin 4
Organism
pco
Phanerochaete carnosa
Pathway
pco03420
Nucleotide excision repair
pco04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
pco00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
PHACADRAFT_214459
09124 Replication and repair
03420 Nucleotide excision repair
PHACADRAFT_214459
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pco04121
]
PHACADRAFT_214459
03400 DNA repair and recombination proteins [BR:
pco03400
]
PHACADRAFT_214459
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pco04147
]
PHACADRAFT_214459
Ubiquitin system [BR:
pco04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Cullin
PHACADRAFT_214459
DNA repair and recombination proteins [BR:
pco03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Cul4-DDB2 complex
PHACADRAFT_214459
TCR (transcription coupled repair) factors
Cul4-CSA complex
PHACADRAFT_214459
Exosome [BR:
pco04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
PHACADRAFT_214459
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cullin
Cullin_Nedd8
Motif
Other DBs
NCBI-GeneID:
18913518
NCBI-ProteinID:
XP_007402226
JGI:
Phaca1_214459
UniProt:
K5VR57
LinkDB
All DBs
Position
Unknown
AA seq
482 aa
AA seq
DB search
MPALKKLMPGPDIVYLQHMYRLYVKIGCLSVLAAALRLYVKDFVYGIFTDGRPDDQRVAA
LFTQRKAYFAVLDNAFYDEVPILPSIFVASSGPSPETRVIECVPNRELASAILDGIGEGL
KASPDKFAELLANYLHKTLLRGPKGRDVADYHTDLEVVLSLYCFTNSKDVFRIYYHRTLA
KRLLLESSASLEYERFVLAKLKEDYDPMLGVGNGMLADIAHSKELSLEFKEKRLGHPTLS
IFVLKHTNWPFALHKTKVVLPVWMSIELTKYKRFHKDKYENQVIEWDHALGYATLIGNFD
LGSKELSVDLLQAVVLLLFNDTEEIPFQGIATRTKIEQPELRRILQSLACGKKRILRKRP
AGNEVNGYDIFSFNAKFSDPESRIHINPVPVTVKTEEADQAEEGVHTEHKYALRAAIIRV
MKAKRKLSREQLGAAVAEAGISKFFPPPSVALMDECIEGLVRDDYLGRAADAESNMLHYN
PY
NT seq
1449 nt
NT seq
+upstream
nt +downstream
nt
atgccagcgttgaagaaactcatgcctggtccagatatagtgtatctacaacacatgtac
cgactatacgtcaagataggctgcttgtcagttctggcggctgctctcaggctatacgtc
aaggattttgtctacggcatcttcacagatggccggcctgatgatcaaagagttgccgca
ctgttcactcaaaggaaagcatactttgcagtgcttgacaatgccttctatgatgaagtc
cctattttgccttcaatatttgtggcttcctcaggtccctctcccgaaacacgcgtcata
gagtgtgttcccaaccgtgagcttgcctctgcaatcctagatgggattggagaaggtctg
aaggcaagtcccgataagttcgcggagttgctcgcaaattatctgcacaagactctcctg
cgtggaccaaaggggagagatgtggcagattatcacacagatctggaagttgtgctttca
ttatactgtttcaccaacagcaaggacgtcttccggatctactaccaccggactcttgca
aagcgtttgctgcttgagtcatctgcctcgttggaatatgagaggtttgtattagcgaag
ctcaaagaagactacgaccccatgttaggtgtaggcaatggaatgcttgcggacattgcc
cattccaaagagctcagtctcgaattcaaggagaagcgactggggcacccgacgctgtca
atttttgtgctgaagcacactaactggccatttgctctgcataaaaccaaggtggtccta
ccagtctggatgtctatcgagctaacaaaatacaagcgattccataaggataagtacgag
aaccaggttattgaatgggaccatgcactcggttatgccacgctcattgggaattttgac
ttggggtcgaaggagctgagcgttgaccttcttcaagcggtcgtcctcctgttattcaac
gacacggaggagatacccttccagggtattgcaacacggaccaagatcgaacagcccgag
cttcgccgaattctccagagtctcgcttgcggaaagaagcgcatcctgaggaagcggccc
gcaggaaacgaggttaacggctatgatatcttctcgttcaacgccaaattctcggaccct
gagtcccggatacacatcaaccctgtgccggtcacggtaaagacagaagaagcggaccag
gcggaggaaggcgtccacactgagcacaagtacgcgctccgtgccgctattatacgagtc
atgaaagccaagagaaagctttcccgcgagcagctcggagccgctgtggccgaggctgga
atttcgaagttcttccccccgccgagtgttgcgctcatggacgagtgcatcgaaggcctt
gtgcgggatgactacttgggaagagctgctgatgctgagtcgaatatgctgcactacaac
ccgtactga
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integrated database retrieval system
