Phanerochaete carnosa: PHACADRAFT_246551 Help Entry PHACADRAFT_246551 CDS       T03128                                  Name (RefSeq) hypothetical protein   KO K03006   DNA-directed RNA polymerase II subunit RPB1 [EC:2.7.7.6] Organism pco  Phanerochaete carnosa Pathway pco03020   RNA polymerase pco03420   Nucleotide excision repair Brite KEGG Orthology (KO) [BR:pco00001]  09120 Genetic Information Processing   09121 Transcription    03020 RNA polymerase     PHACADRAFT_246551   09124 Replication and repair    03420 Nucleotide excision repair     PHACADRAFT_246551  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03021 Transcription machinery [BR:pco03021]     PHACADRAFT_246551    03400 DNA repair and recombination proteins [BR:pco03400]     PHACADRAFT_246551 Enzymes [BR:pco01000]  2. Transferases   2.7  Transferring phosphorus-containing groups    2.7.7  Nucleotidyltransferases     2.7.7.6  DNA-directed RNA polymerase      PHACADRAFT_246551 Transcription machinery [BR:pco03021]  Eukaryotic type   RNA polymerase II system    RNA polymerase II     Core subunits      PHACADRAFT_246551 DNA repair and recombination proteins [BR:pco03400]  Eukaryotic type   SSBR (single strand breaks repair)    NER (nucleotide excision repair)     TCR (transcription coupled repair) factors      DNA-directed RNA polymerase II complex       PHACADRAFT_246551 BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  RNA_pol_Rpb1_1 RNA_pol_Rpb1_5 RNA_pol_Rpb1_6 RNA_pol_Rpb1_2 RNA_pol_Rpb1_7 RNA_pol_Rpb1_3 RNA_pol_Rpb1_4 RNA_pol_Rpb1_R Motif Other DBs NCBI-GeneID:  18913839 NCBI-ProteinID:  XP_007389997 JGI:  Phaca1_246551 UniProt:  K5W9B5 LinkDB All DBs Position Unknown AA seq 1753 aa AA seqDB search MLGHQFAYSAAPIRKVKEVQFGILSPEEIKAYSVAKIEHPEVMDETTHKPKIGGLMDPRL GTIDRNFKCQTCGEGMSECPGHFGHIELARPVFHPGFVVKVKKILECICVNCGRLKADIS DPTFADRIRHVRDPKARMQVVWNYCKGKMICEPDEPRDENDNMENDEPKRGHGGCGAAQP QIRKEGLKLFVQYKRSKDEDEEVKTLQPDKRLFPPHEVYNALKKIPDSDLHLLGLSDEYA RPEWMILTVLPVPPPPVRPSIAVDGGTMRSEDDLTYKLGDIIKASANVRRCEQEGAPAHV INEFEQLLQFHVATYMDNDIAGIPQALQKSGRPVKAIRARLKGKEGRLRGNLMGKRVDFS ARTVITGDPNLELDEVGVPRSIAMNLTFPERVTPYNIHWLQDLVRNGPTTYPGARYVVKD TGERIDLRYNKRADAFLQFGWIVERHLKDGDFVLFNRQPSLHKMSMMSHRVRLMPYSTFR LNLSVTPPYNADFDGDEMNMHVPQSEETRAELSQIAWVPRQIISPQANKPVMGIVQDTLC GIRKFTLRDTFLDWTQVQNILLWVPDWDGTVPTPVVIKPKPLWTGKQLLSMCIPRGINIH RNPDPKSSNPVFDDGVLIENGELIFGIVDKKTVGASQGGLVHVVFREKGPEMTRQLFTGL QQVVNYWLFHNGFSIGIGDTIADRKTMAHITEQIAIRKQTVAQIIDDAAHDRLKPQPGMT IRESFESKVERELNLARDQNGQYAQKHLKEDNNVKQMVVAGSKGSFINISQMSVCVGQQI VEGRRIPFGFRHRTLPHFTKDDFSPEARGFVENSYLRGLTPQEFFFHAMAGREGLIDTAV KTAETGYIQRRLVKALEDVMVHYDGTVRNSLGDLIQFVYGEDGMDGAFIERQNIETFALS NREFEHDYRVDVTDPSGGFLPGVLQLGLDDSSLELQAKLDEEFSQLSEDRQLLREFIFPR SDPATARYLPVNLHRIVQNAVQIFHIDRRKPSDLEPAYIIDAIRALCERLVVVRGDDPLS KEAQANATLLFRMHLRATFATRRVLERYHLNKEALEWVLGEIESKFNQSLAHPGEMCGTL AAQSIGEPATQMTLNTFHYAGVSSKNVTLGVPRLKEIINVATNIKTPSLSVYLESKLAKD AALAKNVQQELAYTSLRTVTAAVEIWYDPDPTSTIIEEDSVFVESFFAIPDEEVESKLHL QSPWLLRLELDRAKMIDRKLTMAYVAGRIAESFKTDLFVIWSEDNSEKLIVRCRVLGGAD KEDDGMGTVEEDIFLRQLENTMLNSVSLRGVPSIERVFLLEHDKIIITPDGGIDARGGEK EWVLETDGVNLKAVMTVDGVDFRRTYSNSCVEVFGVLGIEAARAAIMKELRGVIEFDGSY VNYRHLALLCDLMTHRGSLMAITRHGINRADTGALMRCSFEETVEILMEAAAVGEKDDCH GIAENVMFGQMAPMGTGAFDVALDIDMLKDVIVDHRIPAHTSLVAPQMDGGMTPGQVAMT PYDSSSPVWNPDGSFKGETAAFSPLAMNGGEDAASFSYMPFGQSPMGAGSMSPAAPGYSP SSPNVYSPTSPYVPQSPFAGATSPFGTSPYATSPFYDRSRGPTSPTYSPTSPALNLTSPG YSPTSPRYSPTSPSFSPTSPRYSPQSPSFSPTSPRYSPTSPSFSPASPRYSPTSPAQMSP ASPKYSPTSPVSPASPKYSPTSPTYSPASPAYSPASPAYSPTSPQWSPSSPSQQQNGSNT IRSNAYSMSPSWD NT seq 5262 nt NT seq  +upstreamnt  +downstreamnt atgctgggccaccaattcgcctattctgcggctccgatccgcaaagtaaaggaggttcag tttggaatcctctctccggaggaaattaaagcgtactccgtcgcaaagattgaacatcct gaagttatggatgagacaactcataagcccaagattggcggactgatggatcctcggttg ggcactatcgataggaatttcaagtgccaaacatgcggggagggtatgtctgagtgccct ggtcactttggtcatatcgagctggcgaggccggtgtttcacccgggcttcgtcgtgaaa gtcaagaagatcttggagtgtatatgtgtaaactgtgggagactgaaagccgacatttcg gatccaacattcgcggaccggatacggcatgtccgcgatccgaaggcacgtatgcaagtg gtgtggaattactgcaagggcaagatgatctgcgagccggacgagcctagggacgagaat gacaacatggagaatgacgagcccaagcgtggtcatggtggctgcggtgctgcccagccg cagattcggaaggagggtttgaagctcttcgtccagtacaaacgctcgaaggatgaggac gaggaggtgaagacgttgcagcctgacaagaggctgttccctccacatgaggtctacaat gcgctgaagaagatccccgattctgatctgcatctactcggtctttcggacgagtacgcg cgacccgaatggatgattctcaccgttcttcctgttcctcctcccccagtgcgaccaagc attgctgttgatggtggcactatgcgtagcgaggacgatctgacctacaagctaggcgac atcattaaagcttctgcaaacgtgcggcgatgcgagcaagagggtgctcctgcccatgtt atcaacgagttcgagcagctgcttcagtttcatgtcgccacctacatggacaatgatatc gctggtatcccccaggcactgcagaagtccggccgtccggtcaaggctattcgtgctcgt ttgaagggtaaggagggacgtctgcgtggtaacctcatggggaaacgcgtggacttctcc gctcgaacggtaatcaccggtgaccccaaccttgaactggatgaggtcggcgtaccacgg agcattgcgatgaacctaaccttccctgagcgggtgacaccttataacattcactggctg caagatcttgtccgcaatgggcctacgacatacccgggtgcgcgctacgtcgtgaaggac actggcgagcgtatcgatcttcgctacaataagcgagcggatgcctttttgcagtttgga tggatcgtcgagcgccacctgaaggacggagattttgtcttgttcaaccgacagccgtca ctgcacaagatgagtatgatgagtcatcgcgtcagacttatgccctattccacgttccgc ttgaacttgtccgtcacgcctccgtacaacgctgatttcgacggggacgagatgaacatg catgtgcctcagagcgaggagacccgagccgaactctcccaaatcgcatgggtaccacga cagatcatttcgcctcaggctaacaagccagtcatgggtatcgtgcaggacacactttgt ggtattcgcaagttcaccttgcgcgacacattcctggactggactcaagtacagaacatc ctgctttgggtcccagactgggatggcactgtcccaacgccggtcgttatcaagcccaaa ccgctctggacagggaagcagctcttgtcgatgtgcatcccgcgtggtatcaacatccat cggaatcctgatcctaaatcgtcgaaccccgtgtttgacgatggcgtgttgatcgaaaac ggcgagctcatctttggtatcgtcgataaaaagactgttggtgcatcgcaaggaggcctc gttcacgttgtcttccgtgagaagggcccggagatgacgcgacagctcttcaccggtctc cagcaagttgtcaactactggctcttccacaacggcttcagtattggcatcggcgacacc attgctgaccggaagactatggcgcatatcacggagcaaattgcgatccgcaagcagacc gtcgctcagatcatcgacgacgccgcgcatgatcgtctcaagccccaacccggcatgacc atccgagagtctttcgagagcaaggtcgagcgtgagctcaatctggctcgtgatcagaat ggtcagtacgcgcagaagcacttgaaggaagacaacaacgtcaagcagatggttgttgcc ggctcaaaaggttccttcatcaacatctcgcagatgtccgtctgtgtcggccagcagatt gtcgagggtcgccgtattcccttcggcttccgccatcgtacgcttccccacttcaccaaa gacgacttcagtcccgaagcccgtggctttgtcgagaattcgtatctccgtggcttgact ccgcaagagttcttcttccacgcaatggctggtcgcgagggtctcatcgataccgccgtc aagactgccgagaccggttacatccagcgtcgcctcgtcaaggcgcttgaggacgtcatg gttcactacgacggtacggtgcggaactcgctcggcgatctaatccagttcgtctatggc gaggacggcatggacggagccttcattgagaggcagaacattgagacattcgctctcagc aaccgggaattcgagcacgactatcgggtcgatgttactgatccatctggaggcttcttg cctggtgttctgcagcttggtctcgatgatagctctcttgagctccaggccaagcttgac gaggagttctctcagctgtcggaagaccgtcagctcctccgcgagttcattttcccacgc agcgacccagcgacggcgcgctatctacctgtcaatctccatcgtatcgttcagaatgcg gtacagatcttccacatcgaccgtcgcaagccttctgacctggagcccgcgtatatcatc gacgcgatcagggctctctgcgagcgtctcgttgtcgttcgtggcgatgacccgctgtca aaggaggcccaggcgaatgcaacgcttctgtttcgcatgcatctgcgtgcgacatttgcg acgcgtcgtgtcctcgagaggtatcacctcaacaaggaggctcttgaatgggtgctgggc gaaatcgagtccaagttcaaccaatcgctcgctcatcccggtgagatgtgcggtactctg gccgcgcagtccattggcgagcctgccacgcaaatgacgctgaacacgttccattatgcc ggtgtctcgagtaagaacgtcactctcggtgtgccacgtcttaaggagatcatcaacgtt gcgacgaatatcaaaacaccatcgttgtccgtctacctggagtcgaagttagcgaaggac gctgcgctggcgaagaacgtccagcaggagctggcctacacttcgctccgcacggtcact gctgccgttgagatttggtacgatcccgatcccacctcgactatcatcgaggaggatagc gtcttcgtcgagtccttcttcgctattccagacgaggaagtggagtcgaagctccatctg caatcaccgtggctccttcgtctcgagctggaccgtgctaagatgattgaccgaaagctc accatggcttacgttgctggccgtatcgcggagagcttcaagacggacctattcgtcatc tggtcggaagacaactccgagaagctaattgtccgatgcagagtcttgggcggcgcggac aaggaggacgatggtatgggcaccgtcgaggaggatatcttcctccggcaactcgagaac accatgcttaactctgtaagtcttcgcggagtgcccagtatcgagcgcgtcttcttgctg gaacacgacaagattatcatcactccggatggtggtatcgacgctcgtggtggtgagaag gagtgggtattggagacggatggtgtcaacctcaaggcagtcatgaccgtcgatggcgtg gacttccggcgcacgtactccaacagctgcgtcgaagtattcggtgtccttggtattgag gccgcccgcgctgcgatcatgaaggaattgcgtggtgtcatcgagttcgacggctcatat gtcaactaccgccaccttgcgctcctttgcgacctaatgacccaccgtggttccctcatg gctatcactcgtcatggtatcaaccgtgcggataccggcgccctcatgcgttgttctttc gaggagacggtggaaatcctcatggaggccgcagctgttggcgagaaggacgattgccac ggaatagcggagaacgtaatgttcggccagatggctcctatgggcaccggagcatttgac gtcgccctggacatcgatatgctcaaagatgtcattgtcgaccaccgcatccccgcacac acaagcctcgtcgctccacagatggatggaggaatgacgcccgggcaggtcgcgatgacg ccgtacgacagcagctctcccgtgtggaatccggacggttcgttcaagggtgagacggct gctttctcaccgctggcgatgaatggaggagaggacgcagcgagtttctcatatatgccg ttcggccagagccccatgggtgccggaagcatgtccccagccgcaccgggttacagccca agctcaccgaacgtgtattcaccaacatctccttatgtaccgcaatcgccgttcgcgggc gcgacgtcaccattcggcacatccccctatgcgacctcgcccttctacgaccgcagccgc ggaccgacgtcgccaacgtattcgccgacatccccagctctcaatctcacctcgccaggt tattcgcctaccagcccgagatactccccaacgtccccatcgttctcacctacgtcgccg cgctacagtcctcagtcaccgtcgttcagcccaacatcgcccagatactcaccgaccagt ccttcctttagcccggcgtctccacgctattcgccaacttcgcctgcacagatgtcaccg gcttctccgaagtactcacctacctcacctgtatcgcctgcttcacccaaatattcacct acgtcgccgacctattcccctgcgtcaccagcatattcccctgcgtcgccggcgtatagc cctacgtctccgcaatggtcgccatcgagtccttcgcagcagcagaatggctcaaacacg atccgctcgaacgcgtactcgatgtcgccgtcgtgggattaa

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