Phanerochaete carnosa: PHACADRAFT_247289
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Entry
PHACADRAFT_247289 CDS
T03128
Name
(RefSeq) hypothetical protein
KO
K12620
U6 snRNA-associated Sm-like protein LSm1
Organism
pco
Phanerochaete carnosa
Pathway
pco03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pco00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
PHACADRAFT_247289
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pco03019
]
PHACADRAFT_247289
Messenger RNA biogenesis [BR:
pco03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
PHACADRAFT_247289
mRNA degradation factors
5'-3' decay
Lsm complex
PHACADRAFT_247289
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
Hfq
Motif
Other DBs
NCBI-GeneID:
18914043
NCBI-ProteinID:
XP_007390438
JGI:
Phaca1_247289
UniProt:
K5VDE5
LinkDB
All DBs
Position
Unknown
AA seq
116 aa
AA seq
DB search
MLVVLRDGRKLHGVLRSYDQFANLVLEDTVERIYHQDVYAEMKRGLYLIRGENVVLLGEI
DLDQEDDVPLKQVDWETLEPYHQKDIADKKARDELKANVLFEKRGFCKEGGEGDGY
NT seq
351 nt
NT seq
+upstream
nt +downstream
nt
atgctcgtggtcctcagagatggtagaaagctgcatggggtgctgaggtcgtacgatcag
tttgcaaacctggttcttgaagacacagtagaacgtatataccatcaggacgtatacgca
gagatgaaacgcggactgtacctcatcagaggggagaacgtggttctgcttggcgagatt
gatcttgatcaagaggatgacgtgcctcttaaacaagtagactgggagactctcgagccg
tatcatcagaaagatatcgcagacaagaaggcgcgagacgagctgaaggcgaacgttctc
ttcgagaaacgtggcttctgtaaagagggcggcgaaggcgatggctactga
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