KEGG   Phanerochaete carnosa: PHACADRAFT_247289
Entry
PHACADRAFT_247289 CDS       T03128                                 
Name
(RefSeq) hypothetical protein
  KO
K12620  U6 snRNA-associated Sm-like protein LSm1
Organism
pco  Phanerochaete carnosa
Pathway
pco03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:pco00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    PHACADRAFT_247289
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pco03019]
    PHACADRAFT_247289
Messenger RNA biogenesis [BR:pco03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     PHACADRAFT_247289
  mRNA degradation factors
   5'-3' decay
    Lsm complex
     PHACADRAFT_247289
SSDB
Motif
Pfam: LSM Hfq
Other DBs
NCBI-GeneID: 18914043
NCBI-ProteinID: XP_007390438
JGI: Phaca1_247289
UniProt: K5VDE5
LinkDB
Position
Unknown
AA seq 116 aa
MLVVLRDGRKLHGVLRSYDQFANLVLEDTVERIYHQDVYAEMKRGLYLIRGENVVLLGEI
DLDQEDDVPLKQVDWETLEPYHQKDIADKKARDELKANVLFEKRGFCKEGGEGDGY
NT seq 351 nt   +upstreamnt  +downstreamnt
atgctcgtggtcctcagagatggtagaaagctgcatggggtgctgaggtcgtacgatcag
tttgcaaacctggttcttgaagacacagtagaacgtatataccatcaggacgtatacgca
gagatgaaacgcggactgtacctcatcagaggggagaacgtggttctgcttggcgagatt
gatcttgatcaagaggatgacgtgcctcttaaacaagtagactgggagactctcgagccg
tatcatcagaaagatatcgcagacaagaaggcgcgagacgagctgaaggcgaacgttctc
ttcgagaaacgtggcttctgtaaagagggcggcgaaggcgatggctactga

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