Phanerochaete carnosa: PHACADRAFT_247456
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Entry
PHACADRAFT_247456 CDS
T03128
Name
(RefSeq) hypothetical protein
KO
K13091
RNA-binding protein 23/39
Organism
pco
Phanerochaete carnosa
Brite
KEGG Orthology (KO) [BR:
pco00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pco03041
]
PHACADRAFT_247456
Spliceosome [BR:
pco03041
]
Common components
Common spliceosomal components
General mRNP proteins
PHACADRAFT_247456
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RBM39linker
RRM_3
RRM_occluded
RRM_5
RRM_7
Motif
Other DBs
NCBI-GeneID:
18914090
NCBI-ProteinID:
XP_007390520
JGI:
Phaca1_247456
UniProt:
K5VDM5
LinkDB
All DBs
Position
Unknown
AA seq
584 aa
AA seq
DB search
MSSPPNGKMDVDKAVSPDGHSKSSRNHSTETHRTRRSHRSRSRERERDRDRHERRLRDEP
DEKRSRDRRDKDRSRERSHKDKDYDRERDRERRRESERHRRERGESRHRDRDRDREDREY
RDRRRKRDDTMDDSPEDRLKRKKEDDSTESSLLPPPPASAGLPAPPPPLGDSPRRHPDGS
RDFDRDRRYGDKRRDPRDDYDGASHHRSTSARLRSPYGSDRKSTPPVRRPSPSYDQSNDD
PLAEEPREDDSEARSVFVSQLAARLTARDLGYFFEDKLGEGAVMDSRIVTDRISRRSKGI
GYVEFRTIELVEKAIGLSGTIVMGLPIQVQHTEAERNRTHAGDSLHLPPGVSSHHGGMQL
YVGSLHFNLTESDIRQVFEPFGELEFVDLHRDPMTGRSKGYAFVQYKRGEDAKMALEQME
GFELAGRTLRVNTVHEKGNVRYTPQESLDDTGGGNLNAASRQALMQKLARTDQPAARPQP
IMKPNIPQSMQSKSVLLKNMFNPEEETERDWDKELADDVKNEVEDKYGDVNFIKVERESQ
GEIYVKFDSIESAKKAIEGLHGRWFGGRQVSAAFISDAILQAHQ
NT seq
1755 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtcgccaccgaacggaaagatggatgtcgacaaggctgtgtctccagacggacat
tcaaagtcgtcacgcaaccattcaaccgagacccatagaactcgtcgttctcatcgttcc
aggtcgcgcgagagggagagagacagagacaggcatgaacgccgacttcgagatgagccg
gatgaaaagcggagccgagatcgccgtgacaaggatcgttctcgtgagcggtctcacaag
gataaagactatgaccgggaacgcgacagagaaagaagacgcgagagcgaaaggcaccgc
agggagcgaggtgagagccgtcaccgcgaccgcgatcgtgaccgcgaggatagagaatac
agggatcgccgtcgcaagcgcgacgataccatggacgattcgccggaagaccgtttaaag
cgcaagaaagaagacgacagtactgaatcttctcttcttcctcctcctcctgcctccgct
gggctacccgctcctccgccacctctaggtgatagtcctcgccgtcacccagacggttcc
cgcgactttgaccgtgaccgcaggtacggtgacaagaggcgcgatccccgtgacgactac
gatggcgcaagccatcaccgcagcaccagtgctcgcctacgatctccatacggctcggac
aggaaaagcactcccccagtcaggcgtccctcccctagttatgaccagtcaaacgacgac
cctctggctgaagaaccaagagaagatgattctgaagctcggtctgtctttgtctctcag
ctggctgcccgtcttactgctcgtgatctcggctacttcttcgaagataaactcggcgaa
ggtgctgtcatggactctcgtatcgtgactgacaggatctccaggcgttctaagggtatt
ggctatgtggagttccgtacaatcgagcttgtcgagaaggccatcggtctcagcgggacc
attgtcatgggcttgccaattcaggtccagcataccgaagctgagaggaataggacgcat
gctggagacagcctgcatctacctcccggcgtcagttctcaccacggcggcatgcaactc
tacgtgggctccttgcactttaatctcacggaatccgatatcagacaggtcttcgagcct
ttcggcgaactggaattcgttgaccttcatagggacccgatgactggccgcagcaagggc
tacgctttcgtccagtacaaacgaggtgaagacgccaagatggctctggagcaaatggaa
ggtttcgagctggctgggcgcactctccgtgtaaatactgttcacgagaagggcaacgtc
agatacactcctcaggaatctctggatgacactggcggtggtaacctgaacgcggcatcc
cgacaggcgctgatgcagaaacttgctaggactgaccagcctgctgctcgccctcagccc
attatgaagcctaatatcccgcaatcgatgcaatcaaagtcggttctgctgaagaacatg
tttaaccccgaggaggaaaccgagcgtgattgggataaagagcttgctgacgatgtcaaa
aatgaagttgaagataaatacggcgatgtcaactttatcaaagtggagagggaatcacag
ggtgaaatctatgtcaagtttgactccattgaatccgccaagaaggccatcgaaggtctt
catggtcgctggtttggcggacgccaggtttctgctgcattcatctccgacgctattctc
caggcccatcaatga
DBGET
integrated database retrieval system
