Phanerochaete carnosa: PHACADRAFT_247866 Help Entry PHACADRAFT_247866 CDS       T03128                                  Name (RefSeq) hypothetical protein   KO K03010   DNA-directed RNA polymerase II subunit RPB2 [EC:2.7.7.6] Organism pco  Phanerochaete carnosa Pathway pco03020   RNA polymerase pco03420   Nucleotide excision repair Brite KEGG Orthology (KO) [BR:pco00001]  09120 Genetic Information Processing   09121 Transcription    03020 RNA polymerase     PHACADRAFT_247866   09124 Replication and repair    03420 Nucleotide excision repair     PHACADRAFT_247866  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03021 Transcription machinery [BR:pco03021]     PHACADRAFT_247866    03400 DNA repair and recombination proteins [BR:pco03400]     PHACADRAFT_247866 Enzymes [BR:pco01000]  2. Transferases   2.7  Transferring phosphorus-containing groups    2.7.7  Nucleotidyltransferases     2.7.7.6  DNA-directed RNA polymerase      PHACADRAFT_247866 Transcription machinery [BR:pco03021]  Eukaryotic type   RNA polymerase II system    RNA polymerase II     Core subunits      PHACADRAFT_247866 DNA repair and recombination proteins [BR:pco03400]  Eukaryotic type   SSBR (single strand breaks repair)    NER (nucleotide excision repair)     TCR (transcription coupled repair) factors      DNA-directed RNA polymerase II complex       PHACADRAFT_247866 BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  RNA_pol_Rpb2_6 RNA_pol_Rpb2_1 RNA_pol_Rpb2_2 RNA_pol_Rpb2_7 RNA_pol_Rpb2_4 RNA_pol_Rpb2_3 RNA_pol_Rpb2_5 Motif Other DBs NCBI-GeneID:  18914201 NCBI-ProteinID:  XP_007390754 JGI:  Phaca1_247866 UniProt:  K5XE76 LinkDB All DBs Position Unknown AA seq 1237 aa AA seqDB search MAAVSAVDFDPMQSSYNYEDTGYDMEAEEEEYEEITQEDCWHIISSFFDQKGLVRQQLDS FDEFVQNTMQELVDENADLILDQADQHTGHEADVTRRYEIKFGQIYLSRPTVTEADGSVV PIFPQEARLRNLTYSAPLYVEMKKRTLVGREDPDSTTGDLVWEQEHDESPEDTRKVWIGK VPIMLRSTFCILNKLTQEELFDLNECPYDSGGYFIINGSEKVLIAQERMATNHVYVFAKA QPSPISFLAEIRSAVEKGGKTISQFQVKLYHRNQERSLGNVMKATIPYIKVDIPIWVVFR ALGVISDRDILEHICYDMQDAQMLEMLKPCIDDGFVIQDREIALDFIGNRGTTTGLNRER RLRYAQEILQKEMLPHIHKAYFFGYMIHRLLLAALERRDLDDRDHFGKKRLDLAGPLLAN LFRMLFRKLTRDVYRYLQKCVETHKEFNLSLAVKHNTITNGLKYSLATGNWGDQKKSMSA KAGVSQVLNRYTYASTLSHLRRCNTPLGREGKIAKPRQLHNTHWGMVCPAETPEGQACGL VKNLSLMACISVGSLSAPVIEFLEEWGLESLEENAHSTTPCTKVFVNGVWMGVHRDPANL VKTIKKLRRKDDISPEVSVVRDIRERELRLYTDAGRVCRPLFIVENNQLTLRKKHIEWIA SGVPQYDDAGSRLLKEDGTYDNQPYEWSNLVKDGVIELLDAEEEETVMICMTPEDLENAR LQQAGIDSHRDESEFDPSARLKNFSMAHLWTHCEIHPSMILGVCASIIPFPDHNQSPRNT YQSAMGKQAMGIYLTNFLVRMDTMANILYYPQKPLATTRSMEYLKFRELPAGQNAIVAIL CYSGYNQEDSVIMNQSSIDRGLFRSMYYRSYMDLEKKSGVQQLEEFEKPTRDTTLRMKHG TYDKLEDDGLIAPGTGVNGEDIIIGKTAPIPPDSEELGQRTRTHTKRDVSTPLKSTESGI IDQVLITTNAEGQKFVKIRVRSTRIPQIGDKFASRHGQKGTIGITYRQEDMPFTAEGITP DIVINPHAIPSRMTIGHLVECLLSKVATIVGNEGDATPFTDLTVESVSQILREQGYQSRG LEIMYHGHTGRKLQAQVYFGPTYYQRLKHMVDDKIHSRARGPVQILTRQPVEGRSRDGGL RFGEMERDCMISHGVAAFLKERLFEASDAYRLHVCDICGLTAIANLKKQTFECRSCKNKT ACSQLYIPYAAKLLFQELQSMNIAARLYTVSTGRIRD NT seq 3714 nt NT seq  +upstreamnt  +downstreamnt atggctgcggtttcggctgtggactttgaccctatgcagtcctcgtataattatgaagac accggctatgatatggaagcggaagaagaagagtatgaagagattacgcaggaggactgt tggcacattatttccagcttcttcgaccaaaagggtcttgtacggcagcaactcgactcc tttgacgagttcgtgcaaaacaccatgcaagagctcgtagacgaaaacgcggatctcatc ttggaccaggccgaccagcacacgggtcacgaagcagacgtgacgcgacgatatgagatc aagttcggccagatctacctttcgcgaccgacggttacagaagcggacggctctgttgtg ccaatattcccgcaggaggccaggttgcggaacttgacgtactcggcgccgttgtatgtt gaaatgaagaagaggacactagtagggagagaggaccctgatagcaccaccggagacttg gtttgggagcaagaacatgatgagtcacctgaggacacgaggaaggtgtggataggaaag gtccccattatgctgaggtcaacattttgtatcctcaacaagttgacgcaagaggagctc tttgacttgaatgaatgtccctatgactctggaggatattttatcatcaacggttccgag aaggttctcatcgctcaggagcgcatggctacgaatcatgtctacgtcttcgctaaggct cagccgtcgccgatcagttttctcgctgagattcgcagtgctgtcgagaagggtggcaag accatcagtcagttccaagtgaagctgtaccacagaaaccaagaacgctcgttgggcaat gtcatgaaagcaactatcccttatatcaaggtcgacatccccatctgggtcgttttccgc gcgcttggcgtcatctctgaccgtgatattcttgagcatatttgctacgacatgcaggat gcgcaaatgctcgaaatgctcaagccttgcatcgacgatggttttgtcattcaggaccgc gagattgccctcgacttcattgggaatcgaggaacgaccactggtctgaatcgtgagcgt cgtcttcgatatgcgcaagaaattttgcaaaaggagatgttgccgcatatccataaggca tacttcttcggttacatgattcaccgtctgctactggcagccctggaacgacgggatctc gacgatcgtgatcacttcggaaagaaacgtctggatctggcaggacctctgcttgcaaac cttttccgtatgctcttccgcaagctcacccgcgacgtctatcggtacttgcagaagtgc gtcgagactcacaaggagttcaatctttcactcgccgtcaaacataacacgattaccaac ggtctcaagtactcgttggctactggtaactggggagaccagaaaaagtccatgtccgcc aaagctggtgtctcgcaagtgcttaacagatacacttacgcttccactctttcccacctt cgtcgttgtaacactcccctcggacgagaaggaaagatcgcgaagccccgccagctgcac aacactcattggggcatggtctgtcccgctgagacgccagaaggtcaggcttgcggtctg gtcaagaacctgtctctcatggcttgcatctctgttggctcgctttctgctcctgtcatc gagttcttggaagagtggggtttggagtcactggaggagaacgcgcactcaaccacgccg tgtacgaaggtcttcgtcaacggtgtctggatgggcgtccatcgagacccagcgaactta gtcaaaactatcaagaagctccgtcgaaaggatgatatcagccccgaagtctcggtcgtt cgagatatccgcgagcgagaactgcgtctctatacagatgctggacgcgtctgccggccg ctcttcatcgtcgaaaacaaccagcttactctgcgcaagaagcacattgaatggatcgct agcggagtgccgcaatacgatgacgcagggagtcggcttctgaaggaagatggcacgtac gacaatcaaccctatgagtggagcaacctcgttaaggacggtgttattgagctgctggac gcggaggaagaggagactgttatgatctgcatgacgccagaggacctcgagaatgcccgg ttgcagcaggccggaatcgactctcatcgtgacgagagcgaatttgatccttccgcgcgg ctgaagaacttttcgatggcgcatctgtggacacactgcgagattcatcccagcatgatc ttaggggtttgcgcgagtatcattcctttccctgaccacaatcagtctcctcgtaacacc taccagtcggctatgggtaagcaggctatgggcatctacctcacaaacttcctcgtccgc atggacactatggcgaacatcctctactaccctcagaagccgctggcgacgactcgttcg atggagtatctgaagttccgagaactccctgctggacagaatgcgatcgtcgccattctt tgctatagcggctataaccaggaagactccgtcattatgaaccagagctccattgatcgt ggcctcttccggagtatgtactaccgcagctatatggatctcgagaagaagagcggcgta cagcagctcgaagagttcgagaagccgacccgggatactactctccgtatgaagcacggc acgtacgacaagctcgaagacgacggccttatcgcgcctggcaccggcgtcaacggcgag gatatcattattggcaagaccgcccccatcccaccggacagcgaagagcttggccagcga acacggacacataccaagcgtgacgtatcgacgccgctcaagagtactgagagcggcatc atcgaccaggtgctcatcacgacgaacgcggaaggtcaaaagtttgtcaaaattcgtgtt cggtctactcgtattccccaaatcggagacaagttcgcttctcgtcacggacagaaggga accattggcatcacttatcgccaagaggacatgccgttcacagcggagggtatcactcct gacatcgtcattaaccctcacgccattccctcacgcatgactatcggtcacttggtcgag tgtctgctctcgaaggtcgccaccatcgttggaaatgagggtgatgctacaccgttcact gatctcaccgtcgagtccgtctcgcagatccttcgcgagcagggctaccagtcccgtggc cttgaaattatgtaccacggtcacaccggccgtaagctgcaggctcaggtctactttggc ccgacatactaccagcgtctcaagcacatggttgatgacaagatccactcgcgtgcgcgt ggcccggtacaaatcctcacccgccagccggtcgagggtcgcagtcgagacggtggtctt cgtttcggagagatggagcgtgattgtatgatctcgcacggtgtagctgcgttcttgaag gagcgtctgttcgaggctagcgacgcctatcggttacacgtctgcgacatctgcggtctt accgcgattgctaatcttaaaaagcagacgttcgaatgtcgatcgtgcaaaaacaagacg gcatgctcgcagctttacattccgtacgcggcgaagttgctgttccaggagctgcaaagt atgaacatcgcagcccgtttgtacaccgtatcaacagggcggatacgagattag

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