Phanerochaete carnosa: PHACADRAFT_247904
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Entry
PHACADRAFT_247904 CDS
T03128
Name
(RefSeq) hypothetical protein
KO
K11801
DDB1- and CUL4-associated factor 11
Organism
pco
Phanerochaete carnosa
Brite
KEGG Orthology (KO) [BR:
pco00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pco04121
]
PHACADRAFT_247904
Ubiquitin system [BR:
pco04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
PHACADRAFT_247904
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_TEP1_2nd
WD40_WDHD1_1st
WD40_MABP1-WDR62_2nd
Beta-prop_EML_2
WDR55
Beta-prop_TEP1_C
Beta-prop_WDR90_POC16_2nd
EIF3I
Beta-prop_CAF1B_HIR1
Beta-prop_EIPR1
NBCH_WD40
WDR54
Beta-prop_WDR75_2nd
Motif
Other DBs
NCBI-GeneID:
18914211
NCBI-ProteinID:
XP_007390775
JGI:
Phaca1_247904
UniProt:
K5WQ63
LinkDB
All DBs
Position
Unknown
AA seq
659 aa
AA seq
DB search
MSGIFFSGFGADDEQPVALSYNAILTAMLEIRQRAAARTSQGTSARDEQEGQGAGQEAMN
LDGDHDINRILAELIRDGTMTVEEDDGDQDYVDVDEGEEGEEDDEIEIEEDEEEDEEGDG
PPGYRIVQSHPPPLPRSHWKKEVTEPKQAGLNLLYSGEFGRIHHQIRSRNKAGNAAKFLL
SRSSTIRPPPREDFATDIIPNTDGTAVASYYANAYVGQYSSDSSFYYTCVRDFRLHVYDT
TAPIVPRSPTARASQRLRGGLFAHDHDSCMKVIKTIQAQPGGWTITDSHLSPDNQRMIYA
SVSNVVYMASTLDASAVQVPINFADPPRPDGRYGYEDHYGVWSCKFSADGNEVIAGGTEM
VFVYDLLAEKRTVKIKAHEDDINSCCWADTASGNVLVSASDDTFLKVWDRRSLGSSPKPS
GVLIGHTEGITYVSAKGDGRYVISNGKDQALRLWDLRKMRTNLEFEQVKGGHYGIPNFDY
RRATYPKARYKAHPMDCSVMQYTGHEVLRTLIRCHFSPAETTGQQYIYSGGADGRIHIWS
LDGQVVQVLDRAGTLPMSFHPSEPQTVSQRQAHRRVCVRDVSWHSQQPILMSAGWLGGGW
GTNESSVIARHEWKGLSKMHYSLEDYVEKQKSERTERTQRRSAARAMPGSFRIETDDEE
NT seq
1980 nt
NT seq
+upstream
nt +downstream
nt
atgtctggcatatttttctccggcttcggcgccgacgacgagcagcctgtggcgctctcg
tacaatgccatcctcactgctatgctcgaaatccggcagcgagctgcggcccgtaccagc
caaggaacttccgcacgagacgagcaggaaggccagggggccggtcaagaggctatgaat
ctagacggggaccatgacatcaaccgcattctcgctgagcttattcgagatgggaccatg
actgtggaggaagatgacggtgatcaagactacgtggacgtggatgaaggtgaggaaggt
gaagaggacgacgagatagagatagaagaggacgaggaagaggacgaagaaggcgacggc
cccccaggttatcgtattgtccaaagtcatccaccgccgttacctcgatcccactggaag
aaggaagtgacagagccgaaacaagcggggcttaacctgctctacagcggagagtttggt
aggattcatcatcagatacgctcgcgaaacaaagcaggaaacgctgcaaagttcctgctt
agccggagctcgacaattcgaccacctccgcgggaggactttgcgacggatatcataccg
aatacagatggtactgctgtggctagctattatgcgaacgcctatgttggtcaatactcc
tcagactcttcattttactacacgtgtgtcagagatttccgattgcatgtgtatgataca
actgctcccatcgtgccgaggagccccaccgctcgcgcctcgcaacgattgcgaggcggg
ctattcgcacacgatcatgattcatgcatgaaggtgattaagaccattcaagcgcagcct
ggagggtggacaatcacggattctcatctgagtccggacaaccaaagaatgatatatgcg
tctgtgtccaatgtggtctacatggcgtcaaccctggacgcatccgctgtgcaggtaccc
atcaacttcgcagaccctccgcgcccagacggtcgttatggatatgaggatcattatggt
gtctggagttgcaagttttctgccgatggcaatgaagtcatagccgggggcactgaaatg
gtctttgtatatgacctattggcggaaaagcgaacggtgaagatcaaagctcatgaggac
gacatcaatagctgttgctgggcagatactgcgtccggtaacgttcttgtgagcgcctcc
gacgacactttcctcaaagtctgggaccgtcggtctctgggctcgtcaccaaagccttct
ggcgttcttattggacacacggaaggcataacgtacgtttctgccaagggcgatggccgt
tatgttatctcgaacggcaaggatcaagcgctgcggctctgggatctccgcaagatgcgt
accaacctggagtttgagcaagtgaaggggggccactatggcatacccaactttgactat
cgtcgcgccacgtatcctaaagcgagatacaaagcgcacccgatggactgcagcgtcatg
caatacacgggccacgaagtcctccggaccctcattcgttgtcacttcagccctgcggag
acgaccggccagcagtacatctactctggcggcgcagacgggcgcattcacatttggtca
cttgacgggcaagtcgtacaagtcttggatcgcgccgggacactgcccatgtcgttccat
ccgtcagaaccgcaaacggtctcacagcggcaagctcatcgcagagtctgtgtgcgagac
gtcagctggcactctcagcaacccatcctgatgagtgcaggatggctaggcggaggctgg
ggtaccaatgaatccagtgttatcgcccgacacgaatggaagggcctttcgaagatgcac
tattcgctcgaagactacgttgaaaaacagaagtcggagcggacggagcgtacccagcga
cgtagtgcagcacgggccatgcccggctcattccgtatcgagacagatgacgaagaataa
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