Phanerochaete carnosa: PHACADRAFT_248237
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Entry
PHACADRAFT_248237 CDS
T03128
Name
(RefSeq) hypothetical protein
KO
K11654
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 [EC:5.6.2.-]
Organism
pco
Phanerochaete carnosa
Pathway
pco03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
pco00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
PHACADRAFT_248237
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pco03021
]
PHACADRAFT_248237
03036 Chromosome and associated proteins [BR:
pco03036
]
PHACADRAFT_248237
Transcription machinery [BR:
pco03021
]
Eukaryotic type
RNA polymerase I system
Other transcription-related factors
NoRC (nucleolar remodeling complex)
PHACADRAFT_248237
Chromosome and associated proteins [BR:
pco03036
]
Eukaryotic type
Chromatin remodeling factors
CHRAC complex
PHACADRAFT_248237
RSF complex
PHACADRAFT_248237
WICH complex
PHACADRAFT_248237
B-WICH complex
PHACADRAFT_248237
NORC complex
PHACADRAFT_248237
BRF complex
PHACADRAFT_248237
NuRF complex (fruit fly)
PHACADRAFT_248237
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
SLIDE
HAND
Helicase_C
ResIII
HDA2-3
DEAD
AAA_14
Myb_DNA-binding
HTH_CHD6-9
Ribosomal_L50
DUF7660
Motif
Other DBs
NCBI-GeneID:
18914296
NCBI-ProteinID:
XP_007390965
JGI:
Phaca1_248237
UniProt:
K5XEP7
LinkDB
All DBs
Position
Unknown
AA seq
934 aa
AA seq
DB search
MLKDGELQAGGDDQPFVFEESPSFINGAMRSYQLQGLNWMVSLHHNGLNGILADEMGLGK
TLQTIAFLSYLKHYKDIQGPHLVVVPKSTLQNWSREFERWTPDINTVLLTGTKEERAEII
ANRIIPQDFSVLITSYEICLIEKSALKKLSFEYIAIDEAHRIKNVDSILSQIVRSFMSRG
RLLITGTPLQNNMKELFALLNFICPEIFSDYADLESFLHKDEADGESDDEKSKKVVEALH
KILRPFLLRRVKSDVEKGLLPKKEINIYVGLTEMQRKWYRSVLEKDIDAVNGLTGKKEGK
TRLMNMVMQLRKVTCHPYLFDGAEPGPPYTTDEHLIENSGKMVILDKLLNSMKAKGSRAL
IFSQMSRMLDILEDYCLFRGYKYCRIDGSTAHDDRITAIDEYNKPGSEKFIFLLTTRAGG
LGINLTTADIVVLYDSDWNPQADLQAMDRAHRIGQTKQVYVFRYVTEGSVEERMLERAAQ
KLRLDQLVIQQGRTQTSKAANKEELLEMITHGAEHIVNSSDDMMINDDIDEIIQRGEERT
AELSSKYEGLSFDALANFKSEASVQQWEGEDFRAGRKTLQFNPLSLSKRERKLNYSVDAY
FKESMRGGPSKPDKAPKMPRAPKQLQLQDFQFFPPRLAVLQEKEIAYYKKTNEIPATVEE
PQGSEDTPEKLEEDRKVAQEIIDNAEPLTEEEVAEKNELLKQGFEDWSRRDFQQFVRALE
TYGWTEDFELFAKEVDSKTPEAIGEYYNVFKKKWKELSEYPRIKTRIEEGEAKRNKRSNL
EALLAKKITSVRYPMQELELNYPTTKGKVYSEEEDRYLLCRLYHYGMQVEDVYERIKKDI
SEFPVFRFDWFFKSRSPQELQRRCNTLLGMIEKEAEQQQAQEVKTKSTKGKKRGIEEVKA
EETTAKSSRASTPGSGTPASTAATNKRPNKRKKT
NT seq
2805 nt
NT seq
+upstream
nt +downstream
nt
atgttgaaggacggcgagttgcaggcaggcggggatgatcaaccattcgttttcgaagag
tcaccgagcttcatcaatggtgctatgagatcgtaccagctgcaaggtctcaattggatg
gtctctctccaccataacggtctgaacggtatcctggccgatgaaatgggcctcggaaag
actctgcaaaccattgccttcctttcgtacctcaaacactacaaagatattcaaggacct
catctcgtcgttgtgcctaagtccactcttcagaactggtcacgcgaattcgagagatgg
actcctgatatcaataccgtccttctcactggcaccaaggaggaacgtgctgagatcatt
gccaaccgcatcattccacaagatttctccgtcctcattacctcctacgaaatctgtctt
atcgaaaagtctgcacttaagaagctttcgttcgagtacattgccatcgacgaggcgcac
cgcatcaagaacgtcgactccatactctcccagatcgtccgatcattcatgtctcgtgga
cgtctcttgattaccggtactcctctgcagaacaacatgaaagagcttttcgctctcctg
aacttcatctgccccgagatcttctctgattacgctgacctggagagcttcttgcacaag
gacgaggccgatggcgaatctgacgatgagaagagcaagaaggttgtcgaggcattgcac
aagattctccgacctttcctcctccgccgcgtcaagagcgatgtagagaagggccttcta
cccaagaaggagatcaacatctacgttggtctaacggagatgcagcggaagtggtaccgt
tctgtcctcgagaaggatattgatgccgtcaatggcttgactggcaagaaagagggcaag
acgcgcctgatgaacatggttatgcagcttcgtaaagtcacttgtcacccctaccttttc
gacggcgcagagcctggcccaccctacacgacagacgagcacctgatagagaactcgggc
aagatggtcattctcgacaagctgctcaactcgatgaaggcgaagggctctcgcgcactc
atctttagtcagatgagccgtatgctcgacatcctcgaggactactgcctgttccgtggc
tacaagtactgtcgtatcgatggcagcactgctcacgatgaccgcattaccgctatcgac
gagtataacaagccgggcagcgagaagtttatcttccttctgacgactcgtgctgggggt
ctaggcatcaacttgacgaccgccgacatcgtggtactgtacgacagcgactggaaccct
caggccgacttgcaggccatggatcgtgcacaccgcattggtcaaacgaagcaagtctat
gtcttccgctatgtcacggaaggcagtgtcgaagagcgcatgctcgagcgcgcagcacag
aagctcagactcgaccagctcgttatccagcaaggacggacgcagacgtcgaaggcggcg
aacaaggaggaactgcttgagatgatcacgcacggcgcggaacacatcgtaaactcgtcg
gacgatatgatgatcaacgatgacatcgatgaaattatccagcgtggcgaggaacgcacg
gcagagctgagcagcaagtatgaaggcttatccttcgacgcgcttgcgaacttcaaatcc
gaggcgtccgttcaacagtgggaaggcgaggatttccgtgcgggtcgcaagacgctgcag
ttcaaccctctttcactatccaaacgcgaacgcaaactcaattactctgtcgatgcgtat
ttcaaggagtcgatgcgtggaggcccgtcgaagcccgacaaggcgccgaaaatgccacgc
gccccgaagcagctccagctccaagacttccaattcttcccacccaggctcgcagtactt
caggagaaggagatcgcgtactacaagaagaccaacgagatccctgccacggtcgaggag
ccccaaggctctgaagacacgccggagaagctcgaggaggaccgcaaggttgcgcaggag
atcatcgacaatgcggaaccactcaccgaggaggaagtcgcggagaagaatgagctgctc
aagcagggctttgaggactggagtcgacgggacttccagcagttcgtgcgtgcgcttgag
acttatggatggactgaagacttcgagctcttcgcgaaagaggttgactccaagacccca
gaggcaattggagagtactacaatgtcttcaagaagaagtggaaggagctgtccgaatac
cctcgcatcaagactcgcattgaagagggcgaggccaagcggaataaaaggtcgaacttg
gaggcgttgcttgcgaagaaaatcacatccgtacggtacccgatgcaagagctcgagctc
aactacccgaccaccaaaggtaaggtctactccgaggaagaggaccggtacctgctttgc
cgcctgtatcactacggcatgcaggtggaggacgtctacgagcgcatcaagaaggatatc
agcgagttccctgtcttccgattcgattggttcttcaagagcagaagtccgcaggagctc
cagcggcggtgcaacactcttctcggcatgatcgagaaagaggctgagcagcagcaggcg
caggaagtgaagacaaaaagcacgaagggtaaaaaacgcggcatcgaagaggtcaaggca
gaggaaacgactgccaagtcgtcgcgggcgtcgacacctgggagtggcacgccagcttca
acggcagcgacgaacaagaggccgaacaagagaaagaagacgtag
DBGET
integrated database retrieval system
