Phanerochaete carnosa: PHACADRAFT_249163
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Entry
PHACADRAFT_249163 CDS
T03128
Name
(RefSeq) hypothetical protein
KO
K14568
rRNA small subunit pseudouridine methyltransferase Nep1 [EC:
2.1.1.260
]
Organism
pco
Phanerochaete carnosa
Pathway
pco03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
pco00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
PHACADRAFT_249163
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pco03009
]
PHACADRAFT_249163
Enzymes [BR:
pco01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.260 rRNA small subunit pseudouridine methyltransferase Nep1
PHACADRAFT_249163
Ribosome biogenesis [BR:
pco03009
]
Eukaryotic type
90S particles
Other 90S particles
PHACADRAFT_249163
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EMG1
Motif
Other DBs
NCBI-GeneID:
18914584
NCBI-ProteinID:
XP_007391590
JGI:
Phaca1_249163
UniProt:
K5WIS2
LinkDB
All DBs
Position
Unknown
AA seq
366 aa
AA seq
DB search
MQVDTSARRRRQSLSGDIASPVALPSEKARTMSLHAPPRPKSTPAHERTHQRRRLAEDEQ
AELEKEGMQIDENSSSSSRSSSPTSPVTVLSQNKTNADRPTKPLPQNRARKTAAIMPSKS
PMPAPANPHMLPVQAHVPKGGVASNQRRLFVILEQACLEAYRVSSGGRSKNGREGDVKYA
LLNCDDHQGILAKTGRDIADARPDITHQCLLTLLDSPLNKAGLLQIYIHTAKGVLIEVNP
HVRIPRTFKRFSGLMVQLLHKLSIRGQNGPEKLLKVIKNPVTDHLPVNTIKLTLSGDAPT
IRLSKFLPTLPETHSVAVFVGAMARGKDDFADGVVDQKISISDYPLSASVACGKFCCALE
ELWDIV
NT seq
1101 nt
NT seq
+upstream
nt +downstream
nt
atgcaagtcgatacttctgctcgccggcgtcgccagtccctctctggggatatcgccagc
ccagtcgccctaccgtccgagaaagctcgcaccatgtcgttgcacgctccgccacgcccc
aagtcgacgccagcacacgaacggacgcaccagcggaggagattggccgaagacgagcag
gcagagctcgaaaaggaaggcatgcagatcgacgaaaactcttcgagctcatctcgttcc
tcctctcccacgtcccctgtgactgttctctcgcaaaacaagactaacgctgaccgaccg
accaagccgctgcctcagaacagagcacgcaaaactgccgcaatcatgccatccaaaagc
cccatgcccgctcccgccaacccacatatgctgccagtacaggcgcacgtaccaaagggc
ggcgttgcatccaaccagcggaggctttttgtcatccttgagcaggcgtgcctggaggca
taccgtgtgagcagtggcggacgcagcaagaatggcagggagggagacgtgaagtatgcc
ctgctcaactgtgacgaccaccagggcattctggcgaaaaccgggagggacattgcggac
gctagacccgacattacacaccagtgccttttgacgctccttgattccccacttaacaaa
gctggcctactccagatctacatccacaccgccaagggcgtgctcatcgaagtaaaccct
catgttagaataccacgtacgttcaagcgattcagtggcctcatggtgcaactccttcac
aagctttccattcgcggccagaacggccctgagaagctgctcaaggtgatcaagaatccc
gtcactgatcacctgcccgtgaacacgatcaagctcactctttctggtgatgctcccact
atccggctgtccaaatttctgcctacgctgcctgagacgcattccgtcgctgtctttgtc
ggtgccatggcacgaggcaaggatgacttcgctgacggcgtcgtcgatcaaaagatcagt
atcagcgactacccattaagtgcctcggtcgcctgtggcaagttctgttgtgcgctcgaa
gagctctgggacattgtatga
DBGET
integrated database retrieval system
