Phanerochaete carnosa: PHACADRAFT_249234
Help
Entry
PHACADRAFT_249234 CDS
T03128
Name
(RefSeq) hypothetical protein
KO
K03138
transcription initiation factor TFIIF subunit alpha
Organism
pco
Phanerochaete carnosa
Pathway
pco03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
pco00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
PHACADRAFT_249234
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pco03021
]
PHACADRAFT_249234
Transcription machinery [BR:
pco03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIF
PHACADRAFT_249234
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TFIIF_alpha
Motif
Other DBs
NCBI-GeneID:
18914610
NCBI-ProteinID:
XP_007391632
JGI:
Phaca1_249234
UniProt:
K5WI61
LinkDB
All DBs
Position
Unknown
AA seq
707 aa
AA seq
DB search
MAPATSVLFHPKKKQLYTQLRAQGGGERPTQSSSQNTSGTSTPSPSPPSPQKPKPKVPRP
PRAKEEEDGPPKLEGPFAEFRLMSSALNGWKYDVMKFDSRKPVDILAWAQPVKLNRKEVR
RNTGADDTSGPAAPVAVGPMLGPDNKPVIGMDGRVVMVDAEGKPIRPGEQQTNGAGDTKG
KEKEKPSAAKKKFQKKTRQVFLVPEHIRQLRREERYPWIIEDSSEQELWVASMEEVSKAE
TQAMFMPAANDIFKFVPAHRWYKFQKRPHYHVPNLEEAEDLMKQLAKNKDPERWLLRRRN
GQGPSDATAAIFKAERDGSMPPSSSSLVYSTSQSVGPGGRKLRSVDSGVDRLFGDDDEED
GEGKRRKREYGQEGDLDELDFEDDVQDDDDKMEPDADDEEAKELEERLKREYKTANKTRE
GYIDESDEEEEINELSTAGKDMRKLMKKLEKNGAYDESDDEKNPYASSEEEEPEEEPLQA
PQGPAIIPPEPQAQSRQSSQAPGTPVPSGAKSPTQPPATIKTESGSRATSPIPGHGGHAV
VAQRATSPKAPKLKTNGTSRATSPLAGGSQPTSPIGSPITGRADSPPTQGKPGHKRKAEE
GAGGVPSKLKKRKATAGPTADGELEDWMLVEWLKKAPNATTRDCIHHFTPWLTTEDKKQN
FTKLVKEVAQLKGGVLVLRPAYRGSNAPNSPAPASPAPTSPTPNGTA
NT seq
2124 nt
NT seq
+upstream
nt +downstream
nt
atggccccagctacatcagtcctctttcatcccaagaagaaacagctgtacacccagctg
cgggcccaaggtggcggcgagcggcccacgcaatcgagctctcagaacacgtctgggacc
tcgaccccttcgccatcgccgccgtcgccgcagaagccgaagccgaaggtgccccgcccg
ccgcgggcgaaggaggaggaggacggcccgccgaagctcgagggccccttcgccgagttc
cggctgatgtcgagtgcgctgaacggctggaagtacgacgtgatgaagttcgactcgcgc
aagccggtcgacatcctcgcctgggcgcagcccgtgaagctgaaccgcaaggaggtgcgg
cggaacacgggcgcggacgacacaagcggccccgcggcgccggtggctgtgggccccatg
cttggccccgacaacaagcctgtgatcggcatggacgggcgggtggtcatggtcgacgcg
gagggcaagcccatacgacctggcgaacagcagacgaatggcgcgggggacacgaagggc
aaggagaaggagaagccgagcgcggcgaagaagaagttccagaagaagacgaggcaagtc
ttcctcgtccctgagcacatcaggcagctcaggcgggaagagcgctacccgtggatcatc
gaggacagctccgagcaggaactctgggtcgcaagtatggaagaggtctccaaggcggaa
acacaggcgatgtttatgcccgccgcgaacgacatcttcaagttcgtacccgcccatcga
tggtacaagttccagaagcggccgcactatcatgtacccaacctcgaggaggcagaagat
ctgatgaagcagctggcaaagaataaagacccagaacggtggctactccgcagacgcaac
ggtcaaggcccctcagatgccactgccgcgatatttaaagccgagcgagacggcagcatg
ccgccttcttcttcgtcgctcgtatattccaccagtcaaagtgttggtcctgggggacga
aagctcagatcggtggacagcggtgtcgaccgtcttttcggagatgacgacgaagaggac
ggagaaggcaaacggcgaaaacgagaatacggccaggagggcgatcttgacgagttagac
tttgaggacgatgtgcaggacgacgatgataagatggagccagacgctgacgatgaggag
gcgaaggagctcgaagaacgtctcaagcgggaatacaagactgcaaacaagacaagagaa
ggttacatcgacgagtccgatgaagaggaagaaatcaatgagctatcgactgcaggcaag
gacatgcggaagctcatgaagaagctcgaaaagaacggcgcgtacgacgagagcgacgac
gaaaagaacccttacgctagctcggaagaagaggagccggaggaagagccgctccaggcg
ccacaaggccctgccatcattcctccagagcctcaagctcagtcccggcagtcttcacag
gcacctggtacgcccgtaccctctggggcaaagtcccccacgcagcctccagcgactatc
aaaaccgagtcaggctcgcgcgcgacgtcgcccattcccggtcacggtggccatgccgtt
gttgcacagcgtgccacaagccccaaggcgcccaagcttaagaccaacggcaccagcagg
gcaacaagccccctcgcgggcggcagccagcccacgagtcccatcggtagcccgattacc
gggcgagcagacagcccgccaacgcagggcaaaccaggccacaagcgcaaagcggaggag
ggcgcgggcggagtgccgtcgaagctgaagaagcgcaaggcgacggcgggtcctacggcg
gacggggagctcgaggattggatgctggtggagtggctgaagaaggcaccgaacgcgacg
acgcgggactgcatccaccacttcacgccgtggctcacgacggaggacaagaagcagaac
ttcacgaagctcgtcaaggaggtcgctcagctcaagggtggtgtgctcgtcctccgcccc
gcgtaccgtggctcgaacgctccgaactcgcctgccccggcctcgcccgccccgacgtcc
cctacgcccaacggcaccgcgtga
DBGET
integrated database retrieval system
