Phanerochaete carnosa: PHACADRAFT_249858
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Entry
PHACADRAFT_249858 CDS
T03128
Name
(RefSeq) hypothetical protein
KO
K12811
ATP-dependent RNA helicase DDX46/PRP5 [EC:
5.6.2.7
]
Organism
pco
Phanerochaete carnosa
Pathway
pco03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pco00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
PHACADRAFT_249858
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pco03041
]
PHACADRAFT_249858
Enzymes [BR:
pco01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
PHACADRAFT_249858
Spliceosome [BR:
pco03041
]
Complex A
U2 snRNP components
U2 related factors
PHACADRAFT_249858
Complex B
PHACADRAFT_249858
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
KH_12
ResIII
Leu_zip
KH-I_KHDC4-BBP
CP12
Motif
Other DBs
NCBI-GeneID:
18914768
NCBI-ProteinID:
XP_007391957
JGI:
Phaca1_249858
UniProt:
K5V9A6
LinkDB
All DBs
Position
Unknown
AA seq
851 aa
AA seq
DB search
MDDSEETKRKLQTLDLPEVDMTIYDGQAGIGNLEADDDDDDDNKMAVDEPKNAMDEDEDD
VDPLDAFMSGVKEEVKKVNLEDMKKMDVNVASRVRLDERMADEPGEEVEGPEPDELDTTE
LNPEDILALAAKKARKKDLATIDHSRINYEPFRKEFYIAPPDVAAMTDEEADLLRLELDG
IKIRGVDCPRPVTKWSHFGLPASCLDVIKKLGYAGPTPIQAQAIPAIMSGRDVIGVAKTG
SGKTIAFLLPMFRHIKDQRPLEQMEGPVAVVMTPTRELAVQIHRECKPFLRVLNLRAVCA
YGGSPIKDQIAEMKKGAEIIVCTPGRMIDLLTANSGRVTNLKRVTYLVLDEADRMFDMGF
EPQVMKIVNNIRPDRQTVLFSATFPKQMDSLARKILRKPLEITVGGRSVVAAEIEQIVEV
RDEDTKFNRLLEILGQTYNEDPESRTLIFVDRQEAADNLLRELMRKGYLCMSLHGGKDQI
DRDQTIADFKSGVVPIVIATSVAARGLDVKQLKLVINYDAPNHMEDYVHRAGRTGRAGNK
GTCVTFITPEQDRYSVDIYRALKASNAAVPKELEDLANGFLEKVKSGKAKVAGSGFGGKG
LDRLDQERDAKEKAERKAYGEPEEEKVAAEEPAKAAVDKDEMTFGTFKVEVKRGPAPDSS
KGQLGVAGAALVARRLAAAKEEEKIQNSLRHAEEAVARAGKDTAAYKQATSVVQKLNAQL
RAHKLVAQSQSQHEDLLGKKGVTDATEFHAVIPINDYPQKARWRVTNKETMVQLVDITGA
SVTNKGIYYEPGKEPPPEGPPKLHLLVEANEEWRVEQAVREIKRLLIEASAAALQAEMRN
PTATAGRYSVV
NT seq
2556 nt
NT seq
+upstream
nt +downstream
nt
atggatgattcagaagagacaaagaggaagctccagactctcgacttacctgaggtcgat
atgacaatttatgacggccaggcgggtatcggcaacctagaagccgatgatgacgacgac
gatgacaacaagatggcagtcgacgagcccaagaacgcgatggacgaagacgaagacgat
gttgacccgctcgatgcatttatgagtggcgtcaaggaggaggtgaagaaggtcaacctc
gaggacatgaaaaagatggacgtgaatgtcgcgtcgagggtccgactcgacgaacggatg
gctgacgaacccggcgaagaggttgagggtccggagccagacgagctcgataccaccgaa
ctcaatcccgaggatattctcgcgcttgcggccaaaaaggctaggaaaaaggacctggcc
accattgatcactctcgcatcaactacgaacccttcaggaaggagttctacattgctcct
ccagatgtcgctgcgatgactgacgaggaggcagacctcctccgcttggagctggatggc
ataaagatccgtggcgtggattgcccaaggccagtcaccaagtggagtcacttcggtctc
cctgcgagttgtttggacgtcatcaaaaagcttggttatgctggcccgactcccattcaa
gcgcaggcgatccccgccatcatgtccggcagggacgttattggtgttgcgaagactggc
tcagggaagactattgcctttctactccctatgtttcgtcatatcaaggaccaaaggcct
ctcgagcagatggaaggccccgttgcagtcgtcatgaccccaactcgtgagctcgctgtg
caaatacatcgggaatgtaagccctttttgcgggtcctaaatttacgagctgtatgcgcg
tatgggggatcgcctatcaaagaccaaatcgctgagatgaagaaaggcgcagagatcatt
gtctgtacgccgggacgcatgattgacttgctgactgcaaattctggtcgcgtcacgaat
ttgaagcgtgtgacgtacctcgtccttgacgaggctgaccgtatgttcgatatgggcttc
gaacctcaggttatgaagatcgtcaacaatatccgtcccgaccgccagacggtcctcttc
tccgctaccttcccgaagcaaatggactcgctcgcgcggaaaatcttacgcaaacctctt
gaaatcactgtcggaggtcggtccgtcgttgctgccgagatcgaacagattgtggaagtt
cgcgacgaggatacaaagttcaatcgtctattggagatcctcggtcagacgtacaacgag
gaccccgagagccgcacactcatctttgtcgacaggcaggaggccgcggacaatctactc
cgtgagctcatgcgcaagggctacttgtgcatgtcgctacacggtggcaaggatcagatc
gatcgtgaccagaccatcgcggacttcaagtccggcgtcgttccaatcgtcatcgccacc
tccgtcgcggcgcgcggtctcgacgtcaagcagctgaaactagtcatcaattatgatgcg
ccgaatcacatggaggactatgtccaccgtgctggacgtactgggcgtgctggcaacaag
ggtacatgcgtcaccttcatcactcctgagcaagatcgctactcggtcgacatctatcgc
gctctcaaagcgagtaatgcagctgtccctaaagaactggaggatcttgctaatggcttc
cttgagaaagtcaagtctggcaaggcgaaggtcgccggctccggtttcggaggtaaaggg
ctcgataggctggaccaagaacgtgacgctaaggagaaggctgaacgcaaggcctacggc
gagccagaagaggagaaggtcgcggccgaggagccagcgaaggcggctgtagacaaagac
gagatgacctttgggactttcaaggtcgaggtgaagcgtggaccggctccagactcatcc
aagggccagcttggtgtcgctggcgcggcgcttgtcgcaagacgacttgctgcggccaaa
gaggaagagaagatccagaactcgctgcgccacgcggaagaggccgtcgcgcgggcaggc
aaggacactgctgcatataagcaggcgacgagtgttgtccagaagctgaacgcgcagctc
cgtgcgcacaaacttgtcgctcagtcgcagtcgcagcacgaggatctccttgggaagaag
ggtgttaccgacgccaccgagttccatgctgtcatccctatcaacgactacccccagaag
gcaaggtggcgcgtcacgaataaggagacgatggtgcagctggtcgatattactggtgcc
tcagtcacaaacaaaggtatttactatgagcctgggaaagagccgccaccggagggtcca
ccaaagctgcaccttctcgtggaagcgaacgaggaatggagggtcgagcaggcagtgcgc
gaaatcaaacggctgctcatcgaagcctccgcggcggcgttgcaggcagagatgcgcaac
cctaccgcgactgcgggcaggtacagcgtggtgtag
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