Phanerochaete carnosa: PHACADRAFT_249908
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Entry
PHACADRAFT_249908 CDS
T03128
Name
(RefSeq) hypothetical protein
KO
K12844
U4/U6 small nuclear ribonucleoprotein PRP31
Organism
pco
Phanerochaete carnosa
Pathway
pco03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pco00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
PHACADRAFT_249908
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pco03041
]
PHACADRAFT_249908
Spliceosome [BR:
pco03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
PHACADRAFT_249908
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nop
Prp31_C
Motif
Other DBs
NCBI-GeneID:
18914783
NCBI-ProteinID:
XP_007391988
JGI:
Phaca1_249908
UniProt:
K5X976
LinkDB
All DBs
Position
Unknown
AA seq
544 aa
AA seq
DB search
MSALADELLADLEGLSEGEEEYREDEQEQEQQPQAGSSSGLKRKAPAEVGDEDEVMSEGE
GEDGGQDAQKAVGSLVLEGGMKPAEELDAEEVQRMELGAVEDVRKIAKVYGSKRMNDILK
EIDKYQANPSTPEQMALPTHSNPEYNVIVQANNLSVDVDNEIMVVHKFIRDHYASKFPEL
EQLVQEPPMYIRTVRALGNSEDPTKVNLNTILPAAIVMSVMITATTTTGQPLSEAEWEAV
QRACDLADNLEEVRKKIFMYVSSRMNILAPNLSAIVGTTTAAKLLGVAGGLNGLAKMPAC
NVHLLGAQKKITAGFSTATQRRHTGFIFQSEILQTTPSEYQLKVQRTVGAKCALAARMDL
ERQRRDGSYGQDLREKIEKHVDRLAAPPPSKIVKALAIPNDGPKKRRGGKRARKAKEAYA
QTELRKLQNRMAFGEAEEEVGAFDQTKGLGMIGSGKVRAGVGEAKSRAKLSKANKLRTAA
LTRAAQAGGTQTSGTATSLTVTPVQGFELTNKSAAAARVKEANDRWFAGGTFSFVGQKGD
QKST
NT seq
1635 nt
NT seq
+upstream
nt +downstream
nt
atgagcgcgctcgcagacgagctcttggcagaccttgaagggctctcagagggcgaggaa
gagtatagggaagacgaacaagaacaagagcagcagcctcaggccgggtcaagcagtggt
ctcaagcggaaggcacctgcggaggtcggggacgaggatgaggtcatgtcggagggcgag
ggggaagatggcgggcaagatgcgcaaaaggccgttggaagcttggtgctggagggcggt
atgaagcctgctgaggaactggatgctgaggaagtacaacgcatggaactcggagcagtg
gaagacgtgcgaaagattgccaaggtgtatggtagcaagcgcatgaatgacatcttgaag
gaaatcgacaagtaccaggcaaaccctagcacgccggagcagatggcacttccgacccac
tcgaatccggagtataatgttatcgtgcaggcgaacaacctatcagtagatgttgacaat
gagatcatggttgtacacaagttcattagagaccattacgcatcaaagttccccgaactg
gagcaattggtccaagagccgccaatgtacattcgtactgtgcgcgcacttggtaattcg
gaggatcccaccaaagtcaacctcaataccattcttcccgcagcaattgtcatgtctgtc
atgatcactgctaccactaccaccggtcagcccctctcagaagctgagtgggaggctgtt
caacgcgcctgcgatcttgccgacaacttggaggaggttcggaaaaagattttcatgtac
gtgagctcgcgaatgaatattcttgcacccaacctgtcagctattgtcggtacaactaca
gctgcgaagttacttggtgtcgccggtggtctgaatggtctcgctaagatgccggcctgc
aacgtccacctgttaggtgctcagaagaagatcacagccggtttctccactgccactcag
cgccgtcacaccggattcatcttccaatcggaaatcctgcagaccacaccctcagagtac
cagctcaaggttcagcgtacagtcggcgcgaagtgtgcactcgcggcacgcatggatctg
gaacgccaacggcgggacggcagctacgggcaggatctgcgggagaaaattgagaagcat
gtcgaccgcctggctgctcctcctccgagtaagatcgtaaaggcgctggcgattccgaac
gacggtcccaagaagcgtcgtggaggaaagcgggctcgcaaagcgaaagaggcgtacgcg
cagaccgagcttcgcaagctgcagaaccgcatggcgttcggcgaggcggaagaagaggtc
ggcgcgttcgaccagacaaagggcctgggcatgatcggctcaggcaaggtgagggcaggc
gtcggtgaggcgaagagccgcgcgaaactctccaaggcgaacaagctgcggacggccgca
ctcacgagggccgcgcaggccggcggcacgcagacatcaggcactgcgacatcgctgacc
gtcacaccggtgcaaggcttcgagcttacgaacaaatctgctgccgccgcacgcgtgaag
gaggcgaacgacaggtggttcgcaggaggcacgttctcatttgttggtcagaagggcgac
cagaagagcacctga
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integrated database retrieval system
