Phanerochaete carnosa: PHACADRAFT_250243
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Entry
PHACADRAFT_250243 CDS
T03128
Name
(RefSeq) hypothetical protein
KO
K12580
CCR4-NOT transcription complex subunit 3
Organism
pco
Phanerochaete carnosa
Pathway
pco03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pco00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
PHACADRAFT_250243
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pco03019
]
PHACADRAFT_250243
Messenger RNA biogenesis [BR:
pco03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
PHACADRAFT_250243
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
PHACADRAFT_250243
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Not3
NOT2_3_5_C
Motif
Other DBs
NCBI-GeneID:
18914874
NCBI-ProteinID:
XP_007392183
JGI:
Phaca1_250243
UniProt:
K5WJN2
LinkDB
All DBs
Position
Unknown
AA seq
703 aa
AA seq
DB search
MQASTNQTQKEKLETDLKTQIKKLQRLRDQIKTWVASNDIKDKTVLLENRRLIETQMEKF
KACEKEMKTKAFSKEGLIQSAKLDPRQQEKMETTHWLQQQVEELLLQVETAEAEIETLQG
GAKKKNRGGATAERLEQLERLNERRKWHISRLELILRLLDNGTMPTDKVNALKEDVSYFV
ESNTEEDFDEDEGIYDELNLDEEEEKFGLVNDDHNNDSDESEDASEDLPPRTPSKKQQHD
EESVTSSKRDGSPVLKKATTTLQMRKPSIASETAKPPPPPNFEQKPMASILKAGLNESKA
QTRPLPVKYSAAAAAGVGSSASTQQSHPPPQTPVASSTASTTQPATPTALSISTAISTTT
DVTATTASPSLTHPSLTSPVISSAASISAIPVDDSPYDSPALSEAVPVTTSSPQHTRPDD
SLPIADLSPNTMQPADLQQSSTNGTSQQAAVSQTPGPSPLPTQPPQYPPSQPSGGIPNGS
SPTAAGPTQTQQAMPQYPPGVDQPPPGMIGAPQQQGTRPSSAAAQQILPQQQMRSNAFPG
SLSDLVTSFENVKQKAPHRMSDLNHVHKLLEGSYSSMPQPQDTEKPKYYVPRNPFQTPSY
YPQQPNPILSTPGIFSQLDVETLFYVFYFHPGTYPQYLAAKELKRQSWRFHVKYLTWFQR
HSEPQAITEEYEQGVYVYFDWEGSWCQRKKSDFRFEYRYLSED
NT seq
2112 nt
NT seq
+upstream
nt +downstream
nt
atgcaagcgtccactaaccagacgcagaaggagaagctcgagacagacctcaaaacgcaa
attaagaagctgcagaggttgcgggaccagatcaagacctgggttgcgagtaatgacatc
aaagacaagaccgtcctgctcgagaaccgcaggctaatcgagacgcaaatggagaagttc
aaggcctgcgagaaggagatgaagaccaaggcgttctctaaagagggcctcatccaatct
gccaaactggatccgagacagcaggagaagatggagacaacgcactggcttcagcaacaa
gttgaagagcttctgctgcaggtggaaacagcggaagcggagattgagactctccagggc
ggtgcgaaaaagaagaaccgtggtggggctactgcagaacggcttgagcagctggagaga
ctcaacgagcgaagaaaatggcatatcagccgtctcgagcttattctccggttactcgac
aatggaactatgccgacggacaaggtcaacgcactgaaagaggacgtgtcatatttcgtc
gagagcaataccgaagaagacttcgacgaggatgagggcatatacgatgagctcaacctt
gacgaagaggaggagaagtttgggcttgtcaatgatgaccacaataacgacagtgacgag
tcggaagatgccagcgaagacttacctccgcgaacaccgtcgaagaagcagcaacatgat
gaggagagtgtcacaagtagtaaacgagacggcagcccagtcctcaagaaagcgacaaca
acactgcaaatgaggaagccctcaatagcatcagaaacagcgaaacctccaccgccacca
aatttcgagcagaaaccgatggcgagcatattgaaggcgggcctgaacgagagcaaggca
caaacacggccacttccagtgaaatactccgcggcagccgcagcgggtgtcggctcgtca
gcctcaacgcaacaatcacatcctccaccacagacaccggtagctagctcaacggcatca
acgacacagccggctacgcccacggcattgtcaatatctaccgccatatcgacgacaacg
gatgtaacggcaacgacagcttcgccaagcttaacacatccatcgttaacgagcccggtc
atatcttcggcagcctcaatatctgcgattcctgtagatgattcgccgtatgactcacct
gcgctttcggaggcggtcccagtgacaacatcatcgccacagcatacgcgaccggatgat
tctttgccaatagcagatctttcgccaaacacgatgcaacctgcagacttgcagcagtca
tcaacaaatggcacgagccaacaagcagcagtgtcccaaacacccggtccgtcaccccta
ccgacacaaccgccacagtaccctccttctcagccatcaggtggcatacccaacggctcg
tcaccaacagcagcgggcccgacgcagacgcaacaagctatgcctcagtatccgcctggc
gtggaccagcccccaccgggcatgattggcgcccctcagcagcaaggcacgcggccgtcg
agtgctgcagcacagcagatactccctcaacaacagatgcggtcgaacgcattccctggc
tctttatccgacctagttacatcattcgagaacgtcaagcagaaggcgccgcaccggatg
tctgacctcaaccatgtgcacaaactgttggagggtagttactcaagtatgccacagccg
caagataccgagaagcccaagtactacgtgcctcggaacccattccagacgccgtcgtac
taccctcagcagccaaaccccatccttagcacgcccggtatcttctctcagctcgacgtt
gagacgctattctacgtattttacttccatccgggcacgtacccacagtatcttgcggct
aaggagctgaagaggcaatcatggcgcttccacgtcaagtatctgacatggttccagcgt
cactccgaacctcaggcgatcacagaagagtacgagcaaggagtgtacgtctacttcgac
tgggaaggttcgtggtgccagaggaagaagagcgacttccgtttcgagtaccgatatctt
tctgaggactaa
DBGET
integrated database retrieval system
