Phanerochaete carnosa: PHACADRAFT_251231
Help
Entry
PHACADRAFT_251231 CDS
T03128
Name
(RefSeq) hypothetical protein
KO
K03008
DNA-directed RNA polymerase II subunit RPB11
Organism
pco
Phanerochaete carnosa
Pathway
pco03020
RNA polymerase
pco03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
pco00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
PHACADRAFT_251231
09124 Replication and repair
03420 Nucleotide excision repair
PHACADRAFT_251231
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pco03021
]
PHACADRAFT_251231
03400 DNA repair and recombination proteins [BR:
pco03400
]
PHACADRAFT_251231
Transcription machinery [BR:
pco03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
PHACADRAFT_251231
DNA repair and recombination proteins [BR:
pco03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
PHACADRAFT_251231
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_L_2
RNA_pol_L
Motif
Other DBs
NCBI-GeneID:
18915165
NCBI-ProteinID:
XP_007392891
JGI:
Phaca1_251231
UniProt:
K5X3Y7
LinkDB
All DBs
Position
Unknown
AA seq
141 aa
AA seq
DB search
MNAPNRYELFVLDEGEKLVEITEDTKIPNATTFKIVKEDHTLGNLLRAELLKDSRCLFAG
YKVPHPLHPYFLLKVQSDGSVTASKLVTDACQSLLEKLASVEAKFKREFTFMDVDGPAKD
VGPYGTVDPAQWEGGKDYLDL
NT seq
426 nt
NT seq
+upstream
nt +downstream
nt
atgaacgcgcccaatcgttatgagctctttgtcctggatgaaggcgagaagctcgtcgag
attaccgaggacacgaagatcccaaacgcaacgacctttaagattgtgaaggaggaccac
acgctagggaacctgcttcgggccgaactcctcaaggactctcgctgtctcttcgccggc
tacaaggtcccgcaccctctgcatccatatttcctgctcaaggtccagagcgacgggtca
gtaacggcctcgaagctcgtcaccgacgcctgccagtcgctactcgagaagctcgcgtcc
gtcgaggcgaagtttaaacgtgagttcactttcatggacgtcgacggtccggccaaggac
gtggggccctacggtacggtcgacccggcccaatgggaaggcggaaaagattatctggac
ctttag
DBGET
integrated database retrieval system
