Phanerochaete carnosa: PHACADRAFT_251430
Help
Entry
PHACADRAFT_251430 CDS
T03128
Name
(RefSeq) hypothetical protein
KO
K03136
transcription initiation factor TFIIE subunit alpha
Organism
pco
Phanerochaete carnosa
Pathway
pco03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
pco00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
PHACADRAFT_251430
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pco03021
]
PHACADRAFT_251430
Transcription machinery [BR:
pco03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIE
PHACADRAFT_251430
Prokaryotic type
Archaeal type
TFE
PHACADRAFT_251430
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TFIIE_alpha
TFIIE-A_C
Glyco_hydro_1
Motif
Other DBs
NCBI-GeneID:
18915220
NCBI-ProteinID:
XP_007393012
JGI:
Phaca1_251430
UniProt:
K5WF04
LinkDB
All DBs
Position
Unknown
AA seq
491 aa
AA seq
DB search
MSSQLSKEDHETLHLLVQHVLRAFYEPKYTVVMDQLVRHPVLKDDDLAGRMGFQLKELNK
VMVVLENDKLVKVHRQNELKEGAQRSVGRQYYYIDYQQFCNVVKWRVAEMRRRIDSTLRN
ELDNKGYICSQCQKLFSPLEVDKLMDFAAGTFICDICHAELVDNENAESVRGSQDRMQRF
NRQMRFIREGLRKTEDMVLPAFDVAVWIKKNIEAERAKAAAQSGGLRIAGSAGDGRHEDT
IGVVMSVDKDEATQRAERDREAAAKRMQNILPAWHLKSTISGDLTALGIREHARAEQQAE
VDANRLPSSNDAILRGLTKVEPQPVRNIDLDVNVKPVVTQMNDAEYYDQYYASLVASNST
SAQDTPALTNLSEFGEEEEDVKPNLEYLDSLNEYRKRSRSLEDSGLDRGPSKTPKLNGHS
LSNGFAPPAPEPEPEPPVMAEEGPAPEGLMDDPIVYVNGDRMKFSGVTEEHQESMTPEEY
TAYFEIFQSRS
NT seq
1476 nt
NT seq
+upstream
nt +downstream
nt
atgtcatctcagctttcgaaagaggaccatgaaacactacatctgctggtgcaacatgtt
ctacgtgccttctacgagccgaagtacactgtcgtaatggaccagctggtccggcacccg
gttctcaaagatgatgacttggccgggaggatgggtttccaactgaaggagctcaataag
gtgatggtcgttctggagaatgacaagctggtcaaagttcaccgccaaaatgagctcaag
gagggtgctcagagatctgttggacggcagtactattatatcgactaccaacagttctgc
aatgttgtcaagtggcgtgtggcggaaatgcgccggcggatagactctaccttgagaaat
gaacttgacaacaagggatacatctgctcgcagtgtcaaaagctattttcccctttggaa
gttgacaagctgatggatttcgctgctggaaccttcatttgcgacatctgtcacgccgag
ctcgtcgacaatgagaatgcggaaagtgttcgcggcagccaggaccgtatgcaacgtttc
aacaggcagatgcgcttcattcgagagggtctccgaaaaactgaggacatggttctccct
gcgtttgatgtggctgtctggatcaagaagaacatcgaagcggagagggcgaaggccgct
gctcagtcgggcgggctcagaattgctggctcggctggagacggcaggcacgaggacacc
ataggagtcgtcatgtcggtggacaaggacgaagccactcagcgggccgagcgggacaga
gaagccgctgctaagcgcatgcagaatatactacccgcctggcacctcaagagtaccata
tctggcgacctcaccgcgcttggcattcgggagcatgcgagggcggagcagcaggcggaa
gtggatgcgaaccggctaccaagctcgaacgatgcgatcctgcgcgggctgaccaaggtg
gagcctcagccagtgcgcaacatcgacctggatgtgaacgtgaagccggtggttacccag
atgaacgatgcggaatattacgaccagtattatgcctcgttggtcgcctcgaacagtacc
tccgcgcaggatactcccgccctcaccaatctcagcgagtttggcgaggaagaagaggac
gtcaagccgaatcttgagtatcttgactcgctgaacgaataccgaaagcgctcgcgatca
ctggaagacagtggccttgaccgaggtccgagcaaaaccccgaaacttaacggtcactcg
ctgtcgaatgggttcgcgcctcctgctcctgagcccgagcccgagccaccggtcatggct
gaagaagggccagcgccagaagggcttatggatgatcccattgtatatgtgaacggtgat
cgaatgaagttctccggggttaccgaggaacaccaggagagcatgacacccgaagagtat
acggcctacttcgagatattccagtctcgttcgtag
DBGET
integrated database retrieval system