KEGG   Phanerochaete carnosa: PHACADRAFT_251605
Entry
PHACADRAFT_251605 CDS       T03128                                 
Name
(RefSeq) hypothetical protein
  KO
K14962  COMPASS component SWD2
Organism
pco  Phanerochaete carnosa
Pathway
pco03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:pco00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    PHACADRAFT_251605
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pco03019]
    PHACADRAFT_251605
   03036 Chromosome and associated proteins [BR:pco03036]
    PHACADRAFT_251605
Messenger RNA biogenesis [BR:pco03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Cleavage and polyadenylation specificity factor (CPSF) complex
     PHACADRAFT_251605
Chromosome and associated proteins [BR:pco03036]
 Eukaryotic type
  Histone modification proteins
   HMT complexes
    COMPASS/SET1 complex
     PHACADRAFT_251605
    COMPASS/SET1 complex (yeast)
     PHACADRAFT_251605
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_WDHD1_1st WD40_CDC20-Fz Beta-prop_EML_2 EIF3I Beta-prop_CAF1B_HIR1 WDR55 Beta-prop_TEP1_2nd ANAPC4_WD40 NBCH_WD40 Beta-prop_WDR90_POC16_2nd Beta-prop_SPT8 Beta-prop_DCAF4 Beta-prop_TEP1_C Beta-prop_RIG_2nd WD40_MABP1-WDR62_2nd Beta-prop_WDR75_1st Beta-prop_IFT122_1st Beta-prop_WDR35_TULP_N Beta-prop_EIPR1
Other DBs
NCBI-GeneID: 18915267
NCBI-ProteinID: XP_007393112
JGI: Phaca1_251605
UniProt: K5W1N7
LinkDB
Position
Unknown
AA seq 311 aa
MWLKRLDRTLKTLYSKKYGVDLPRFTHKQTTIVHASTKEDDTIRYHSLHDNKYLQYFKGH
KGKVVSLEVSPVDDGFMSGSMDKTVRLWDLRSPHCRGLLNLPAPPVVAYDASGLVFAVGV
NTYARILLYDQANFDKAPFLVITLDDPTLALISYPPRPIYMTSLAFSSNGKYLLVGCSGN
AHYILDAFEGHLLAKLEGPVGLERRKINAKETIEPQRGISGEEVSWTPDSKFVVGGSLDG
KIMVWDVRELPVKEGPVDHKNHPLRLQPVAKLDGHPGPARCVQFNPRLAMMCSAGAELVS
ITVFVRSSVLC
NT seq 936 nt   +upstreamnt  +downstreamnt
atgtggctaaagcgtctggacaggactctgaagaccctctattccaaaaaatacggagta
gacctgccacgattcacccacaagcagaccaccattgtccatgcatctacaaaggaagat
gacaccatccgataccattcgttgcacgacaacaagtacctgcaatacttcaaaggccat
aaggggaaggtagtttctctcgaggtctctcctgtggacgacggcttcatgtccggctca
atggacaagacagtacgtctatgggacctgcgttctccccactgtcgtgggctgctgaac
ctgccagcgccgccggtggttgcctacgatgcatctgggcttgtcttcgccgtgggcgtg
aatacatacgcgcggatcctcctctatgaccaagccaactttgacaaggcgccgttcctt
gtcattactcttgatgatcctacacttgctctcataagctatccgcctcgaccgatctac
atgacgtcgctcgccttctcgtccaacgggaagtacctcctagttggttgctccggcaat
gcccactacatattggacgcgttcgaaggtcatctacttgccaagctggaaggtcccgtt
gggctagaacgtcggaagatcaatgccaaagagaccatcgagcctcagcgtgggatcagc
ggagaggaggtttcctggacaccagacagcaagttcgtcgttggagggagcctggatggc
aagatcatggtctgggatgtccgagagttgccggtgaaagaagggcccgtagaccacaaa
aaccacccgcttcgtttacagcctgttgcgaagctggatgggcacccgggccccgcacgt
tgcgtccaattcaacccacgccttgctatgatgtgttcagccggtgctgaattggtaagt
attaccgtctttgttcggagttctgttctatgctaa

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