Phanerochaete carnosa: PHACADRAFT_252066
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Entry
PHACADRAFT_252066 CDS
T03128
Name
(RefSeq) hypothetical protein
KO
K10843
DNA excision repair protein ERCC-3 [EC:
5.6.2.4
]
Organism
pco
Phanerochaete carnosa
Pathway
pco03022
Basal transcription factors
pco03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
pco00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
PHACADRAFT_252066
09124 Replication and repair
03420 Nucleotide excision repair
PHACADRAFT_252066
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pco03021
]
PHACADRAFT_252066
03400 DNA repair and recombination proteins [BR:
pco03400
]
PHACADRAFT_252066
Enzymes [BR:
pco01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
PHACADRAFT_252066
Transcription machinery [BR:
pco03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
PHACADRAFT_252066
DNA repair and recombination proteins [BR:
pco03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
PHACADRAFT_252066
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ERCC3_RAD25_C
Helicase_C_3
ResIII
Helicase_C
SNF2-rel_dom
DEAD
AAA_34
SBP_bac_6
Motif
Other DBs
NCBI-GeneID:
18915398
NCBI-ProteinID:
XP_007393398
JGI:
Phaca1_252066
UniProt:
K5WFI8
LinkDB
All DBs
Position
Unknown
AA seq
835 aa
AA seq
DB search
MENEDYVDVDDNDFAESDTDTSLVPRSATINFSALTRKLEASRKDGDNGDDSSGLPTHRR
QQDSLVSHIFQDHDFSWLHLKSDHASRPLWISPEDGHIILEAFSPIAEQAQDFLVAISEP
VSRPAFIHEYKLTSYSLYAAVSVGLQTEDIIEVLNRLSKVPVPESITTFIRERTLSYGKV
KLVLKHNKYYVESSHPETLQILLKDRVIREARVHSAPVDNSIKASTFTTAKAPVKGNLVI
SGTKEAEKKKDESASGKGTNGAPTSDKELFTSVVGVESDEIEEDDDTVHSFEIDDTKIDD
VKRRCNELEYPMLEEYDFRNDTVNANLDIDLKPSTVIRPYQETSLSKMFGNGRARSGIIV
LPCGAGKTLVGITAACTIKKSCLVLCTSSVSVMQWRQQFMQWSNITDRQIAVFTADQKEK
FAGESGIVVSTYSMVANTHNRSHESKKMMDFLTSREWGFILLDEVHVVPAAMFRRVVTTI
KAHSKLGLTATLVREDDKIADLNYMIGPKLYEANWMDLAAKGHIANVQCAEVWCPMTPEF
YREYLREQSRKRMLLYCMNPKKFQACQFLIKYHEDRGDKIIVFSDNVYALEAYAKKLGKL
YIHGGTGQVERMRILQHFQHSPEVNTIFLSKVGDTSIDLPEATCLIQISSHFGSRRQEAQ
RLGRILRAKRRNDEGFNAFFYSLVSKDTQEMFYSTKRQQFLIDQGYAFKVITHLDGMEDM
SDLVYKTRDEQIELLSSVLMANESEADLGTDVRANEGDLAGTITSKDFGMPGKFPAVQRT
TGSLAALSGGQHMSYVEQNKSANKKLAREAAPRHKLFAKRDKDKAAARKEARAQV
NT seq
2508 nt
NT seq
+upstream
nt +downstream
nt
atggaaaatgaggattatgtcgatgtggacgataacgatttcgctgagagcgacacggac
acatctcttgtgcctcgcagtgcgaccatcaacttctctgcgctgactcgaaagcttgag
gcatcgaggaaggacggagataatggcgacgatagctctggtctacccacacaccggcgg
caacaagacagtctcgtctcgcatatatttcaggaccacgacttctcttggctacacctg
aaatccgatcatgcttctcgccctctatggatcagtcctgaagatggacatatcatcctg
gaggcgttttcgcccattgctgagcaagcgcaggacttcttggtcgcgattagcgagcct
gtcagtagacccgcattcatccacgaatacaaacttacgtcgtactcgctatacgccgcg
gtgtcagttggcctccagacggaagatattatagaagttttgaatcgtctttcaaaggtc
cctgtacccgagagtatcaccacgttcattcgtgaacgcacgttatcgtatggcaaggtc
aagctcgttctgaaacataacaagtattatgtggaatccagccacccagagaccctgcaa
attcttctcaaggacagggtcatacgggaagcccgggtacactctgcgcctgtcgacaac
agcatcaaggcctcaacctttaccacggccaaagcaccagtcaaaggtaatctcgtcata
tctggcactaaagaggccgagaagaagaaggacgaatcggcctctggcaagggtacgaat
ggcgcgcctacgagcgacaaggagctatttacttctgttgtcggggtggagtcagacgaa
attgaggaagacgacgacaccgttcattcctttgagatagatgacacgaagattgatgat
gtcaaaaggcgctgcaacgaactcgagtatccgatgctcgaggagtacgacttccggaac
gataccgtgaacgccaatctggacatcgacttgaaaccatctacggttattcgaccatac
caggagaccagtttgagcaagatgttcggcaatggccgcgcgcgttccggaatcattgtt
ctaccttgtggtgcgggcaagacccttgtgggcataacggcggcatgtacaatcaaaaaa
tcttgccttgtgctctgcacctcttcggtctctgtgatgcaatggcgacagcagttcatg
cagtggtccaacattacagatcgtcaaatcgccgtcttcactgcagatcagaaagagaag
tttgcaggcgagagtggcatagtcgtgtcgacatattcaatggtcgccaatacgcacaat
cgttcccacgagtccaagaagatgatggacttcctaacatcgcgcgagtggggcttcatc
ttgcttgacgaggtgcacgttgtcccggcggccatgtttcgtcgagtcgtgaccaccatc
aaggcacattcgaagctcggtctcacagccacccttgttcgcgaggatgataagatcgcg
gatttgaactatatgatcggtccaaagctttatgaagccaactggatggatctcgccgca
aagggccacatcgcaaacgtgcagtgtgccgaggtgtggtgtcccatgacgccggagttc
taccgcgagtatctgcgcgagcagtcgaggaagcgcatgctgttgtactgcatgaacccc
aagaagttccaggcctgtcagttcctaatcaagtaccacgaagaccgcggggacaagatt
atcgtgttctcagacaatgtctacgccttggaggcttacgcaaaaaagcttgggaaactc
tatatccacggggggacaggtcaagttgagcggatgagaattttgcagcatttccagcac
agcccggaggtcaacaccatcttcctgtcaaaggtgggcgacacttcgattgacctcccc
gaagcgacctgccttattcagatctcgtcccacttcggttcgcggcggcaagaggcacag
cggctcgggcgtatcctccgagccaagcggaggaatgatgaaggttttaacgccttcttc
tactcgctggtgtcgaaggacacgcaagagatgttctacagtacgaagcggcagcagttc
ctgatcgaccaggggtatgcgttcaaggtcatcacgcatttggacggcatggaagacatg
tcagacctggtgtacaagacacgggatgagcagatcgagctgctgtcgtcggtgctcatg
gccaacgagagtgaagcggacctgggcaccgacgttcgcgcgaatgagggcgacctggcg
ggcacgatcacgtccaaggactttggcatgccgggcaagttcccggcggtccagcgcacg
acagggtcccttgcggcgctgagcggcggacagcacatgtcatacgtggagcagaacaag
tcggcgaataagaagcttgctcgagaagctgctccgcggcataaactgttcgcgaaacgg
gataaggacaaggctgctgcgcggaaggaggctcgtgcgcaggtgtaa
DBGET
integrated database retrieval system
