Phanerochaete carnosa: PHACADRAFT_252171
Help
Entry
PHACADRAFT_252171 CDS
T03128
Name
(RefSeq) hypothetical protein
KO
K11649
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
pco
Phanerochaete carnosa
Pathway
pco03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
pco00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
PHACADRAFT_252171
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pco03021
]
PHACADRAFT_252171
03036 Chromosome and associated proteins [BR:
pco03036
]
PHACADRAFT_252171
Transcription machinery [BR:
pco03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
PHACADRAFT_252171
Chromosome and associated proteins [BR:
pco03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
PHACADRAFT_252171
PBAF complex
PHACADRAFT_252171
GBAF(ncBAF) complex
PHACADRAFT_252171
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SWIRM
SWIRM-assoc_1
Myb_DNA-binding
Myb_DNA-bind_6
ZZ
COG6_C
Motif
Other DBs
NCBI-GeneID:
18915419
NCBI-ProteinID:
XP_007393448
JGI:
Phaca1_252171
UniProt:
K5V5Z4
LinkDB
All DBs
Position
Unknown
AA seq
729 aa
AA seq
DB search
MSSPKRSGSPSPSSSDPKRIRLTVPQHNQGATPVDPENASGKRSELEPVQGGDIANLPPI
DTPTAPSDSAPGSAVPPTIRQLKADDGEDGGDVSMAEGGDAAEEDAESGDENDEEDPAQL
EATRVKLEEQARKYLAAQTHEVIIPSYAAWFDMSKIHPVERRALPEFFNSRNRSKTPAIY
KDYRDFMINTYRLRPTEYLTVTACRRNLAGDVCAIMRVHAFLEQWGLINYQIDPEQRPAA
LAPPFTGHFRVILDTPRGLQSLHPGTRPANHPNQPGVNGESKPQPPSTPASLELRSSIYQ
TTAKASRQVSPEEAKALTNGAASGSTLHADKHQCDTCGVDCTPLRYHSLKVKNFELCPPC
YLDGRFPSSMFSGDFVKLTQAQGANGIHHGSSTDADDDWSDQEVLRLLEGVEMYDDDWSE
IERHVGSRSAQQCIRKFLQLPIEDAYIAAEGNMGPLRYSKVPFEQADNPVMSVVAFLAGV
VGPGVAAEAAKSALQELTDGDKKENTEEAAVGEGKAEETKEGEGAAEPEEEAEKSDDKMQ
EDAPKEGDAATASATSPHAATGEEMTVDGEVSSEATKPTRSIPHSKVVRAANLALKSSAK
AARELAEAEDQHIRSTLAAVIKLTLTKLELKMSQFEELEELLEEERKGLESARMSLVNER
LGLRKMLETVKGELAKNQAGISTPGVLAEAASQAQEALATSGIRVSEVHGVIIEGENGPT
ETPNIANLG
NT seq
2191 nt
NT seq
+upstream
nt +downstream
nt
catgtcctcgccgaagcgaagcggttcaccttccccgtcgtcgtcagacccaaaacgtat
tcgactgaccgtcccacaacataaccagggcgcgaccccggttgatcctgaaaacgcatc
agggaaacggagcgaactcgaaccggtccaaggcggagacattgccaacttgccgccgat
agacactccaacagcaccctccgactctgcgccaggctcggcagtgccgccaactattcg
ccaattaaaggccgatgatggtgaggacggcggggacgtgtcgatggcagaaggaggaga
tgccgccgaagaggacgctgaatctggtgacgagaatgacgaggaggaccccgcacaact
ggaggcgacaagagttaagctggaagaacaagcacgaaagtatctcgcagctcagactca
tgaagtcattataccctcttacgctgcatggttcgatatgtcaaagatccatcccgtcga
gcgacgcgctctccctgagttcttcaactcgcgaaatcggtctaaaactcctgccatata
taaagattaccgcgacttcatgatcaacacgtataggttacggccgaccgagtacctaac
cgttacggcctgccgcaggaatttggcaggagacgtctgcgctatcatgcgcgttcacgc
cttccttgagcagtggggactcataaattatcagattgatcctgagcaacgaccggctgc
tttggccccaccattcacaggtcacttccgagtgatccttgatactcctcgcggtctgca
atctcttcaccctggtacaagacctgccaaccacccgaaccagcctggagttaacggaga
atctaaacctcagccgcccagtactcctgcttcgctcgaattgcgctcctctatctacca
aaccactgcgaaagcctctcgacaagtcagccctgaggaggccaaggctctcacgaatgg
cgcagctagcggatccacccttcatgccgataagcatcagtgcgacacttgtggggtcga
ttgcactcctctgcgctaccactcgttgaaggtcaagaacttcgagctgtgtccaccctg
ctacctcgatggccgctttccttcttcgatgtttagtggcgacttcgtcaagttgacgca
ggcccagggtgccaacggtatacaccatgggtctagtaccgatgcggacgacgactggtc
ggatcaagaagttttgcgcttgttggaaggtgtcgagatgtacgacgacgactggtcgga
gatcgagcgccacgttggatcccgctccgcgcaacagtgtatccggaagttcctccagct
tcctatcgaggatgcgtatatcgcagcggagggcaacatgggtcctctgaggtattccaa
ggtaccgttcgagcaggcagataaccctgtcatgagcgtggtggcgttcctcgctggtgt
agtggggcctggcgttgctgctgaggccgcaaagtcggcgctgcaggagcttaccgacgg
cgacaagaaggagaacacggaggaggccgcggttggtgaggggaaggcagaagaaaccaa
agaaggtgagggcgcggcggagccggaggaagaggcggagaaatcagatgacaagatgca
agaggatgctccgaaagagggtgatgccgcaactgcctcagctacttcgcctcatgcagc
taccggtgaagagatgaccgtcgacggcgaggtctcttctgaggccaccaaaccaactcg
aagtatccctcactccaaggtcgtccgcgccgcgaaccttgccctcaagtcctcggcgaa
ggcggctcgtgagctcgccgaagccgaggatcaacatatccgttcgacacttgcagccgt
catcaagctcacgctcacaaagctcgagctgaagatgtcccagttcgaagagctggagga
actactggaggaggaacgcaaaggtctcgagagcgcgcggatgtcactcgtcaacgaacg
actaggtttgcggaagatgttggaaacggtaaaaggcgagctggcgaagaaccaggctgg
tatcagcacgccaggtgtactggcagaggccgctagccaagctcaagaagccctcgccac
tagtggcattcgggtgtcagaggtccatggtgtgataattgagggagagaacggtcccac
tgagacaccgaacattgcaaacctcggttga
DBGET
integrated database retrieval system
