Phanerochaete carnosa: PHACADRAFT_252272
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Entry
PHACADRAFT_252272 CDS
T03128
Name
(RefSeq) hypothetical protein
KO
K20177
vacuolar protein sorting-associated protein 3
Organism
pco
Phanerochaete carnosa
Pathway
pco04138
Autophagy - yeast
pco04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
pco00001
]
09140 Cellular Processes
09141 Transport and catabolism
04138 Autophagy - yeast
PHACADRAFT_252272
04148 Efferocytosis
PHACADRAFT_252272
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pco04131
]
PHACADRAFT_252272
Membrane trafficking [BR:
pco04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
PHACADRAFT_252272
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Vps39_1
TPR_ELP1
Motif
Other DBs
NCBI-GeneID:
18915444
NCBI-ProteinID:
XP_007393497
JGI:
Phaca1_252272
UniProt:
K5W2R3
LinkDB
All DBs
Position
Unknown
AA seq
683 aa
AA seq
DB search
MNSKSSTLPRSNVLVLGSNSVHCLLPATLIAQADALLDRHRLEEAVDLADRHLKRLQARV
AVGQEEADELRYVYQRIGFQCLTETLFDDAGKHFFAGHLDPRVLVRYYPHLCGTLLGEEE
TVDVFAGVQEHMPREASIDDIIRNYSPHLAPNTSTAPPTIELREILNMAAADMLKVFLRK
WRAKRRDEVHDRRANEVVDTVLARLYTESGETTDLLALIGGPNDIVLHELEPVLIRSSRY
DALCRLYKTRGQEAKLLDAWSKLITGEWIDLDVHDPLSSMFMFLNEKRDKALAQEWGTWL
LKYDQDQAMRLLFTVGLGKRTAKGGAEESALLRRIQEADPRAAAQFLENLVLNRRSADPD
LHNQLASVYVDQLLSCFADESISKLWRAKAASYTSGKVDVPFLSYFASTTPDSDSKETRL
RTALFLQGSRFYDPELIRRRLEEHEQKKVLSLEVAVVLGKLGRHREALSALVLDLHDSAS
AEIYCTLGGAVISPKVAHLLGERFQLQRWAALITPLPMANKATPMEREKTVDEGLKKDLT
KILLGVYMSGGEAMAERAAQLLSAQGMNLDGEEVLATIPSEWPLRVLSSFLARSLRRTLH
ARHEGQLVKAIATSENLAVAERTWLVLREEGAVIEEAMDGDGDDDGSADEKGGESGLGLS
LDEKAELVRPAQGGGEAPVVDFT
NT seq
2052 nt
NT seq
+upstream
nt +downstream
nt
atgaactcgaagtcgtcgacactacctcgctcgaatgtgctcgttctgggatcgaactct
gtgcactgtctcctgccggcgacgctcatagcacaagcggatgcgctgctcgacagacat
cggctcgaagaagccgtggacctggcagacaggcacctgaagcggctacaggccagggtg
gctgtcggtcaagaggaggccgacgagctgcgctacgtgtatcagcgcatcggcttccag
tgcctcaccgagaccctgttcgacgacgccggcaagcacttcttcgccggccacctcgac
ccgcgcgtgctcgtccggtactacccgcacctctgtggtacactgctcggcgaggaagaa
accgtcgatgtctttgcgggcgttcaggagcacatgccgcgcgaggcgagcatcgacgac
atcatcaggaactactcgccgcacctcgcgccgaacacgagcacggcgccgccgacgatc
gagctccgcgagatcctgaacatggccgcggcggacatgctcaaggtgtttctgcgcaag
tggcgcgcgaagcgcagggacgaggtgcacgaccggcgcgccaacgaggtggttgacacg
gtccttgcgaggctgtacacggagtcgggagaaacgacagacctccttgcgctcatcggc
ggcccgaacgacattgtgttgcacgagctcgagccggtgctcatcaggagcagccggtac
gacgcgctctgcagactgtacaagacccgaggacaggaagcaaagctcctggacgcctgg
tcaaagctgatcactggcgagtggatcgatctcgacgtgcacgacccgctgtccagcatg
ttcatgttcctgaacgagaagcgagacaaggccctcgcgcaagaatggggcacctggctg
ctaaagtacgaccaggaccaagcgatgcggctactgttcactgtcggattggggaagcgc
acggcgaaaggcggggcggaagagtccgcgctgcttcgtcgcatccaagaggcagatccg
agagctgcggcacagttccttgaaaacctggttctgaacaggcgcagtgctgatccagat
ttgcataaccaactagcgagcgtatatgtggaccaattgctgtcttgtttcgcagacgag
tccatctctaagctatggcgcgcaaaagccgcttcatacacctctggcaaagttgatgtt
cccttcttatcttactttgcgtccacgacaccagactcggactcgaaagagacacggtta
cggactgctctgttcctccagggctcgaggttctatgacccggagcttatcagacgaaga
ttagaagagcatgagcagaagaaggtactcagtcttgaggtggccgtcgtgctcggaaag
cttggtcgtcatcgagaagctctaagcgcgctcgtacttgatttgcacgactccgcttcg
gccgagatttattgcacgttgggcggcgcggtcatatcaccgaaagttgcgcatttacta
ggggaacggttccagctgcagcgatgggccgcgctcatcacgccgctgcccatggcgaac
aaggccacgcccatggagcgtgaaaagacggtagacgagggtctgaagaaggacctgaca
aagatactgctgggggtgtacatgagcggaggagaggcgatggccgaacgcgctgcgcag
ctgctgagcgcacaggggatgaacctggacggggaagaggtgctggcgacgatcccgtcc
gagtggccgctgcgggtgctgtcgtcgttcctcgcacgctcgctccggcgaacgctgcac
gcgcgccacgagggccagctcgtgaaggcgatcgcgacgagcgagaacctcgccgttgct
gagcgcacgtggctcgttctccgcgaggagggcgcggtcatcgaggaggccatggacggc
gatggcgacgacgatggtagcgcggacgagaaggggggcgagtcgggcctggggctgagt
ctggacgagaaggccgagctggtgcgtccggcgcagggcggaggggaggctcctgtggtg
gattttacttga
DBGET
integrated database retrieval system