Phanerochaete carnosa: PHACADRAFT_252403
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Entry
PHACADRAFT_252403 CDS
T03128
Name
(RefSeq) hypothetical protein
KO
K01147
exoribonuclease II [EC:
3.1.13.1
]
Organism
pco
Phanerochaete carnosa
Brite
KEGG Orthology (KO) [BR:
pco00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pco03016
]
PHACADRAFT_252403
Enzymes [BR:
pco01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
PHACADRAFT_252403
Transfer RNA biogenesis [BR:
pco03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
PHACADRAFT_252403
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNB
WH_CYT4
Motif
Other DBs
NCBI-GeneID:
18915469
NCBI-ProteinID:
XP_007393555
JGI:
Phaca1_252403
UniProt:
K5X5V4
LinkDB
All DBs
Position
Unknown
AA seq
808 aa
AA seq
DB search
MLSQQVGNDRTILSLLSTGEAWVHLPEDVMFAVPGLVDRPTIMRAYDPQKEEEEQLPPKT
IAARVAVLKKIRALEKEVETNYQSVSMKIHRILEDAPWANSEDWQEITTAEILRTIGDKD
VLVQLCVHKFLMANHDRFIAQTSSFLETQKFWVRPRQPLGDLEAVSRMLAVSDPALDGFY
KKAKTLVATSRMDQTSSSSPAGRANISITFTSEEQAIIRVLHDFVRSTRSTQKDPYVVPV
ATVMKRMGLSEGKVDQAVVHKLLIEMGVVAPWDDPVTRERALLCVPSRTSIPAPSTSTSS
GASLSPEEFYPRDIVEHVRHDFKDLPAFVIDDEGAQELDDALSIESIPSEPGSYWLHVHV
ADPTLKIHPNHTLARQARIQYTTSYDIHSTTPMIPSAFMYDGLSLGTNSRNGLSENVLTF
SCKVNELGDITDYKVRAGLLRNVHVLQYNQVDKLLGLPARSQFLPFARKANLESRLVTPS
LAPAQVEELRTLYNISLKFVANRFLSNRFWFSAPTVKVTMDSKPSPPNSTDLTHPNIFEG
FPQLTYEVGEQAYDEIGARRMVAEAMKAACRVASRFCRDHNIPAVRRTSTAPDATDEALA
DVLSLRDPDTYIPYEDIMKKKVGFPQGDNQVSTKGHWVMGVPDGEGYLRVTSPLRRYADL
VSHWQIKHALAADGTPVQPLFSHDWMTEFAKEMTTKEVALRALERRHHLFWALKYIDRWR
ADPRNLAEGPNPFDNLEGIAIRESSADATLRRNTVRVIIPQLGVRAMLELRGADEYARRP
MLGFRVPVKFLGLTLGTKPELGVTLRDV
NT seq
2427 nt
NT seq
+upstream
nt +downstream
nt
atgctttcccaacaagtaggcaatgaccgcactatcctaagtctcttgagtacaggcgag
gcttgggtgcacctgccagaagatgtcatgttcgccgtcccaggtctggttgatcggcct
accatcatgcgggcttacgaccctcaaaaagaagaagaagaacagcttccccccaaaaca
atcgcggctcgagttgccgtcctgaaaaagatacgcgcgctggagaaggaggttgaaacc
aactatcagagcgtttcaatgaagatccaccgcatcctcgaagacgcgccgtgggcaaat
tccgaggattggcaggaaatcacgacggcggagatattgaggactattggcgataaagac
gttcttgtgcagctctgcgtgcacaagttcctcatggcgaaccacgaccgcttcatcgcg
cagaccagcagcttcttggaaacacaaaagttttgggttcgtcctcggcagccccttggg
gacctggaggcggtttcgagaatgcttgcagtcagcgacccagcgctggacggcttctac
aaaaaggcgaaaacacttgtcgcaacatctcgcatggatcagacctcttcttcaagtcct
gcgggccgtgcgaatatctccattaccttcacttcggaagagcaagcaattattcgcgtg
ctccacgatttcgtccgatcgacgcgttcgacacagaaagatccttacgttgttccagtc
gctaccgtcatgaagcggatgggtttgtccgaggggaaggtcgatcaggctgttgttcac
aagctcctcatcgagatgggcgtggtcgcgccgtgggacgatcccgtcaccagggagagg
gccctgttatgcgttccgtcgagaacgagcatcccagcgccttctacctcaacatcatct
ggtgcgagtctcagtcccgaagagttctaccctcgcgatatcgtcgagcacgtgcggcat
gacttcaaggacctacctgccttcgtcattgacgatgaaggcgcgcaagagctcgacgac
gcgctgtctatcgaatcaattccttccgagccgggctcgtactggcttcatgtccacgtc
gctgatcccactcttaaaatccacccaaatcatacactggcacgccaggctcgtatacag
tacactacatcttacgacatccacagcacgacgccgatgatcccatctgccttcatgtac
gacgggcttagtcttggtacaaattctaggaacggcctctcggagaatgttctcacattc
agctgcaaggtcaacgagctcggcgacatcacggactacaaagtccgggcagggcttcta
cgtaacgtgcatgttctgcagtataatcaggttgataagcttttgggtctacctgctaga
tcacagttcttgcctttcgcacgaaaagcgaacctggaatcccgacttgtcactccttct
cttgcacctgcacaagttgaagagctgcggactctctataacatctccctcaagttcgtg
gccaatcggttcttgtccaatagattttggttctcggcacccacggtgaaggtcactatg
gattctaagccatcaccaccgaattccacggatctgacacatccaaatatcttcgagggc
ttccctcagctcacctatgaagttggagagcaagcgtacgacgaaatcggtgcgcggcga
atggttgcggaagcaatgaaagctgcctgtcgcgtcgcgtcgcgattttgccgtgatcat
aacatccccgctgttcgacgtacatcgaccgctccagacgccactgacgaagccttggcg
gatgtgctctcgctgcgcgaccctgatacctatattccctatgaggacatcatgaagaag
aaggtcggcttcccacagggtgacaatcaggtgtcaacgaaggggcactgggtcatgggc
gtgcccgacggcgagggctacctgcgtgtgacctcgccattgcgacggtacgccgacctc
gtctcgcactggcagatcaagcacgccctcgcggcggatgggactccggtgcagccgctt
ttcagtcacgactggatgacggagttcgcgaaagagatgacaacgaaggaagttgcgctc
cgtgctctcgagcggcgtcatcacctcttttgggccctcaaatacatagaccgctggcgc
gcggacccacgcaacctcgctgagggcccaaatccgttcgacaacctcgagggtattgcc
atccgagagagctccgccgatgctacgctgcgccggaacaccgtgcgtgtgatcatcccg
cagctcggcgtgcgtgcgatgcttgagcttcgcggcgcggacgagtacgcaaggcgcccc
atgctgggattccgggtgcctgtcaagtttcttgggctcacgcttggtaccaagcccgag
ttaggtgttacgctgcgcgacgtatga
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integrated database retrieval system
