Phanerochaete carnosa: PHACADRAFT_253878
Help
Entry
PHACADRAFT_253878 CDS
T03128
Name
(RefSeq) glycoside hydrolase family 28 protein
KO
K01213
galacturan 1,4-alpha-galacturonidase [EC:
3.2.1.67
]
Organism
pco
Phanerochaete carnosa
Pathway
pco00040
Pentose and glucuronate interconversions
pco01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pco00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
PHACADRAFT_253878
Enzymes [BR:
pco01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.67 galacturonan 1,4-alpha-galacturonidase
PHACADRAFT_253878
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Glyco_hydro_28
Beta_helix
Motif
Other DBs
NCBI-GeneID:
18915904
NCBI-ProteinID:
XP_007394489
JGI:
Phaca1_253878
UniProt:
K5VYI5
LinkDB
All DBs
Position
Unknown
AA seq
423 aa
AA seq
DB search
MRPTALPWIASTALVFSTLCSAANAVKTCTLSPLGHGRDDTDQVEEAIAKCGQSGHTVFE
PGQYNITRKMTWNLVESTIDLHGYLNFVPDIQYWLNPNNTYRVVFIQDQASWFVVTGRSF
EIDAHSTGGIMGNGQTWWSYYSANNITRLDGDGRPIALTLVNVTNGTVKNFRIEQQPFWC
NAVAESQSVVYDGMLCNATNEDPRFVGQNIVPNTDGIDTYRSDDVTMINWDITCGDDCLA
IKGNSTNVVARDITCRGGNGIAIGSLGQYVNLPDIVNNLTIENVQAIRLDSNVQPNMGTG
IYFKTWTATVHGVPPTGGGGGGGHVSNVLARNFSLDRVSLPIHLYQTNDGQSGDAPSKLQ
FSNLAFEDFTGTSLSDEIVDIECSAAVPCPNISFRNINVVPPSGDAPEYVFKNVVNETGL
PSS
NT seq
1272 nt
NT seq
+upstream
nt +downstream
nt
atgcgaccgacagcattgccgtggattgcttctacagctctagtcttttcgacgctttgc
tctgccgccaatgctgtgaaaacatgtacacttagtccccttggtcatggaagagacgat
acggaccaggtcgaagaagcgattgcaaaatgcgggcaatctgggcatactgtgtttgag
cctggtcagtataacatcactaggaaaatgacctggaatctcgtcgaatctaccatcgac
ttgcacggatatctgaattttgtccctgacattcagtattggctcaatccgaacaataca
tatcgagttgtcttcattcaagaccaggcatcgtggtttgtcgtaactggccgttccttc
gagattgatgcccacagcaccggaggtatcatggggaacggccagacgtggtggtcctac
tactccgcaaacaacattactcgcttagacggcgacggtcgacccattgcgctcaccttg
gtcaacgtgacgaacggcacggtgaaaaacttccggatcgagcagcagcctttctggtgc
aatgctgtcgcagagtcgcagagcgtggtgtatgacggaatgttatgcaacgccacaaac
gaggatcctaggtttgtgggtcaaaacatcgtgccgaacactgatggtattgatacatat
cgatccgacgacgtaacgatgataaactgggacattacttgcggtgacgactgtttagct
atcaaaggaaactcgacaaacgtcgtggcacgcgacattacttgtcgcgggggaaacggt
attgccataggctccctaggacaatacgtgaatctccctgacatcgtgaataatctcact
atcgagaatgtacaggccattcgcctcgactcaaacgtgcagccgaacatggggacaggt
atatatttcaaaacatggacagcaacggtgcacggtgtgccgcctaccggagggggtggg
ggcggagggcacgtctcgaatgtgctcgccagaaacttcagcttagatcgcgttagcttg
cctatccatctctaccaaacgaatgacggacaatccggcgatgcgccctcgaagctgcag
tttagcaacctggcgttcgaagatttcaccgggacgtcgttatctgacgaaatcgtggat
atcgaatgcagtgccgcggtgccgtgcccaaacatatctttcaggaacatcaatgtcgtt
cccccttcgggagacgcgccggagtacgtcttcaagaatgtcgtgaacgaaacgggtctc
ccgagtagctaa
DBGET
integrated database retrieval system
