Phanerochaete carnosa: PHACADRAFT_253961
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Entry
PHACADRAFT_253961 CDS
T03128
Name
(RefSeq) hypothetical protein
KO
K11648
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1
Organism
pco
Phanerochaete carnosa
Pathway
pco03082
ATP-dependent chromatin remodeling
pco03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
pco00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
PHACADRAFT_253961
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
PHACADRAFT_253961
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
pco01009
]
PHACADRAFT_253961
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pco03021
]
PHACADRAFT_253961
03036 Chromosome and associated proteins [BR:
pco03036
]
PHACADRAFT_253961
Protein phosphatases and associated proteins [BR:
pco01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
PHACADRAFT_253961
Transcription machinery [BR:
pco03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
PHACADRAFT_253961
SWI/SNF complex
PHACADRAFT_253961
Chromosome and associated proteins [BR:
pco03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
PHACADRAFT_253961
PBAF complex
PHACADRAFT_253961
SWI/SNF complex
PHACADRAFT_253961
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF5
Motif
Other DBs
NCBI-GeneID:
18915930
NCBI-ProteinID:
XP_007394530
JGI:
Phaca1_253961
UniProt:
K5VYM6
LinkDB
All DBs
Position
Unknown
AA seq
1918 aa
AA seq
DB search
MNTQAGQHHNPAMLAALQQQQQQQQHGHGQMNPNMMNAMSGMNGMAGMNPTQQQQFQQML
AAKYQGAGMGMGGGSGGAGGFNPQMMQQYQQQHQGGGGGTAGSMGVNPQALMNMGSMNMS
AMGMGGMNGQGSIASNPGFNPQMLAQQQRQFNQASGRPGTGGGVNPQMLMQQHNPSGTGN
MGGPSGMSNMSNGGGMNNMSGMNNGIMGMGGMVMGGMGGINPQALSMTAQSGPSPQNANS
VSSPQPPHTQSTSINPAALNAGSGTPSNMGMGGGMGTMGGGGSQASMGNLQLTPAQIQQL
SHMSPQERHKAMQRLMMLNFQHQQREMQMRRSSGELNMAGMGGMGMQGQGQRTQTGMQGQ
SMDGMMGGMANSFNSGMGGGMGGMDGNGMMGMDNLNMTAMGMQGMGGGMGGMQSMGGMQG
MSAAQLQQMQLLQMQHAQGQDRPTSSMAQAQSQHASPTQPNAFPNQGQAQVSSPVRVQTP
HQQQNMHMQQHQQMQQQQHHPNAGIMGPPPSIPPRQPTATPAASPAPRSGTGMGPPGQYG
QHPQHSQQHHYQLGHTQSPRPGTAGTAATPGPAAISRTSSSMGMQQHHQGSQHGQQQSNA
QQPGQQGLPAPAPIPIQPRPVPPNARASGSPAPIPRPGTGQSMHGPSGLRAITPALVGSR
PNTATGFRPQQAPSTPQTSQGSAQYQNQQQLQQGQLAQQQQSTHTPISTPTSATYPPIAP
APTAGSAPGSPRVSMKRRPSGTPVPPSIAGTSSQGSHLEQSFTPQGQIQTQTPGQAQGPQ
GMPGTNMTPAQLMHMRMSGGTPGSNMMNIQGANGLMAGAGGMMGPPVLPRPQQSNQAQLS
AGGVGADMGMPGMNGMSGPMGVNGMQVPGMARQPSVGDIRTSNAGTPGVPGASLSINTNI
NTNLNPNLNAPMPLVGTPNMSGPLASAMAIPTPNVPGSPNLAMLADPLIPGAPATPNRQA
SHTPAAGSPFPGGIPGMPGSAERKMAGPGVLAGAPPLSRVSTGDVFGGLSAPTSSTTATT
NGAAAPAAQAQTQIVPQLPPLPANVSLNPKVTRVSVVPLKDSETTIRALKQEEIERVKEW
MKTDEEYDARYKQMRERMTEEVREAIVKPRAWYEKDPLEDPRAARRRKEKFDLIGLKGRE
EMKRKKAGRREGFKLPRTVNPEDASRPEQLVPLRLEFDVDHHKMRDTFVWNLNDPIITPE
IFAQSIVDDYSLAPSYHAVITKTIQDQLSDFKAHTATFGEDGFDDVVMHGQFADDEEMWW
DAWRNHVRSDTLLRHWETQVERRTRKRRKIVKDEEVETKGVPVASSLDAYMSVDEFEEDE
NKMLEEMRILIKLDIIVGPVKLEDQFEWDLDSPDPSPEHFADIYTKELGLSGEFKTAIAH
SIREQVQTYQKSLFLVGHPSDGSAVQDDDLRLSLLPSLSTGARSMDQVVAFTPRLDYLSD
GEIERNEKEREKELNRRRRKTNRGRRGIVLPDRDPPKTFRTPAIGFPEVDPATLALANAN
LAPTSRRAAAAAASHNIANMIASENGTSLSPQVMPAPVPTAVAAPQLMKEKKPKGLMKPP
SYPSSVLRPRAHVKAPTDGTAADPSTVRPPLDIDPPVSSNVENRGARVPLSAKRTKELER
EAKEREYVDGQHPNYIDGVWHCSNCGCPESIAIGRRKGPLGDKSQCGACGKFWHRHRRPR
PVEYNSSLEYHSNIKKEEEMARLAASRRKRPHAHVAEASSKAPTVEPETPRKPSPEPDSK
PVSRSTVLETPKLPKIEKTEAASPMSTTSSISETPLATRGKTNGVHSTPSAPAIAPSQSE
SSEGIQDTPQDSHAVLPSVAPHSGAGPRAGGNRPARDPPAWLKEAMKELNDKYPDDRFEA
VLRRGPNPAQPEWRIKCTDCPGKLYTPGPGETLTNYEVHLKNRQHRQKVNARIGNGQS
NT seq
5757 nt
NT seq
+upstream
nt +downstream
nt
atgaatactcaagcagggcagcaccacaaccctgccatgctcgccgctcttcagcagcag
caacaacaacaacagcatggacatggccagatgaacccgaacatgatgaacgccatgtct
ggcatgaacggcatggccggcatgaacccaacacagcagcagcagttccagcagatgctc
gcggccaagtaccagggtgccggcatgggcatgggaggcggaagtggaggcgcgggtggc
tttaatccacagatgatgcagcagtatcaacagcaacatcaaggcggaggcggaggcacg
gcaggctcgatgggcgtaaatccacaagcgttgatgaacatgggcagcatgaacatgagc
gccatgggcatgggtggtatgaacggacaaggatctatagcttccaaccccggcttcaac
ccacagatgctcgctcaacagcagcggcagtttaaccaagcctccggccgaccagggacg
ggcggtggcgtcaacccccaaatgcttatgcagcaacacaacccaagcggaaccggcaat
atgggtggcccgtcgggaatgagcaatatgtcgaacggcggaggcatgaacaacatgagc
ggaatgaacaacggaataatgggtatgggtggcatggttatgggtggcatgggcggaatt
aatcctcaagctttgagcatgacggcacagagcggccctagtccacagaatgcaaactct
gtctcatccccgcaacccccgcatacgcaatcgacatctatcaaccctgctgccttgaac
gctggttccggtacgccctccaatatgggtatgggcggtggtatgggtaccatgggcgga
ggtggcagtcaggcgagtatgggcaacctccaactcacccctgcgcagattcagcagctc
agtcacatgagccctcaagagcgacacaaagcgatgcagcggctcatgatgctcaacttt
cagcaccagcagcgcgagatgcagatgcgtcgaagtagcggagagctgaacatggccggt
atgggcgggatgggaatgcaggggcagggtcagcgcacccagacgggcatgcagggccag
agtatggatggcatgatgggcgggatggcgaacagcttcaacagcggcatgggtggagga
atgggtgggatggacggcaacgggatgatgggcatggacaacttgaacatgactgcgatg
ggtatgcaaggcatgggcggtgggatgggcgggatgcaaagcatgggtgggatgcagggc
atgagcgccgcacaactccagcagatgcagcttctccagatgcaacatgcccaaggccag
gatcgtccgacgtcgtcgatggcgcaagcccagagccagcacgcgagcccgactcaaccg
aacgccttccccaaccaaggtcaagcccaggtctcatctcctgtccgcgttcaaactcct
catcaacaacaaaacatgcacatgcaacaacaccagcagatgcagcagcagcagcatcac
ccaaacgcgggcataatgggcccgccgccgtcgatccctccgagacagcctacggctacg
cctgctgcttcccctgctcctcgttctggtactggcatgggtcctcccggtcagtacgga
caacatcctcagcactcgcaacagcaccactatcagcttgggcacactcagagtcctcgt
cctgggactgccggcacggctgccacacctggtcctgccgcgatttcgaggaccagtagc
tccatgggcatgcaacaacaccaccaggggagccagcacggccagcaacagtcgaatgct
cagcagcccggccaacaaggtcttccagcgccagcgccaatacctattcagcctcgtccc
gtccctccaaacgctcgcgcctccggaagccctgcgccgataccacgtcccgggactggc
cagagcatgcacggtccaagtggactgcgtgcgattactcctgcactcgttggcagccga
cccaacactgctactggcttccgtccacagcaagcgccatcaacgcctcagacctcacag
ggctcagctcagtatcagaatcagcagcagttgcaacaaggtcagctagcgcagcaacag
cagtctacgcatacacccatctcaacaccgacatcagcgacgtatccaccgattgcacct
gcgcccacggcaggctcggcgcccggctcgccaagggtgtctatgaagaggaggccatct
ggaaccccagtaccgccttccattgcgggtacctcttctcaaggatcgcatttggagcag
tcgtttacgccacaaggacaaattcagacgcagactcctgggcaggctcaaggtcctcaa
gggatgcctggtacgaacatgacacccgctcagttgatgcatatgcgcatgtcgggcggt
acgccggggagcaatatgatgaacatccaaggagctaacggccttatggctggtgctggc
ggcatgatgggccctcctgtcctcccgcggccgcaacaatcgaatcaggcgcagctctct
gctggtggcgtaggtgccgacatgggcatgccaggtatgaacggcatgtcgggtcctatg
ggcgtcaacggtatgcaggtgcctggtatggcgcggcagccaagtgtaggggacatccga
acgagcaacgcgggcacccctggtgtacctggagcaagtctcagcatcaatacgaacatt
aacacgaacctcaacccgaacctcaacgctccgatgcccttggtgggtacacctaacatg
tctggtccgcttgcctctgcgatggcgatacctactccaaatgtgccgggctcgccgaat
ctggcgatgcttgctgaccctttgatccctggtgcgcctgctacgccaaacaggcaggca
tcgcacacgccggctgcgggctcaccgtttcctggcgggataccgggtatgcctggcagc
gcagagcgcaagatggcgggccccggagtactcgctggtgcgccgccgctctctcgggtg
tccactggcgatgtcttcggtggactctcagctccaacgtcatccaccacggcgacaacg
aacggtgcggctgctcccgctgcgcaagcccagacgcagatcgtcccgcagctcccgccg
ctgccggccaacgtgagtctgaacccaaaggtgacgcgtgtgtcagtcgtgccactcaag
gactcggagacgacgatccgggcgctgaaacaagaagagatcgagcgggtgaaggagtgg
atgaagacggacgaagagtacgacgcgaggtataagcagatgcgcgaacgtatgacggaa
gaggtgcgcgaggcgatcgtcaagcctcgtgcgtggtacgagaaagacccgttggaagat
ccccgggcggcaagacgccgaaaggagaagtttgacctcatcggactcaaggggagggag
gagatgaagcggaagaaggcgggaaggagagaggggttcaagttgcccagaactgtcaac
cctgaggacgccagccgtcccgaacagctggtgccgcttcgcctcgagttcgatgtcgac
catcataagatgcgagacaccttcgtgtggaacttaaatgatcctatcattactcccgaa
atctttgcgcagtccattgtggacgattacagtcttgccccgagctaccacgcagtgatc
acgaagacgatccaagaccagctgagcgacttcaaggcacacacggcgacatttggcgag
gacggattcgacgatgtcgtcatgcacggacagttcgccgacgatgaggaaatgtggtgg
gacgcgtggcggaaccatgtccgcagcgatacgcttctccgtcattgggagacacaagtc
gagcgccgcacgcgcaaacgtcgcaaaattgtcaaagacgaagaagttgagacgaagggg
gtgcctgttgcgtctagtctcgacgcgtacatgtcagtggacgagtttgaagaggacgag
aacaagatgcttgaggagatgcgcatcttgatcaagctcgatatcattgttggcccggtc
aaacttgaggaccagtttgaatgggacctcgatagccccgacccttccccggagcacttc
gctgacatctatacgaaggagctcggcctcagtggcgaattcaaaactgcaatcgcgcat
tcgatccgcgaacaagtgcaaacctatcaaaaatccctcttcctcgttggtcacccatct
gacggctcggcagttcaagacgacgaccttcgtttgtcgttgttaccgtccctcagtaca
ggcgcgcgctccatggatcaagtcgttgcctttacgcctcgtctcgactacctcagcgat
ggtgaaatcgagcgcaacgagaaagagcgtgagaaagaactcaatcgtcgccgtcgcaag
acaaatcgcggacgcagaggcatcgtacttcccgaccgggacccgcccaagacattccgt
actcccgcgattggcttccccgaggtcgaccctgccacgctggcactcgcgaacgcgaac
ttggcgcctacctcccgccgcgcggctgcggctgcggcttcgcacaatatcgccaatatg
attgcatcggagaacggcacctcgctctcgccacaggtcatgcctgctcctgttcctact
gcggtggctgcgcctcagctgatgaaagagaagaagccgaagggcctcatgaaaccacca
tcatacccttcgtctgtccttcgcccgcgtgctcatgtcaaggcgccgacggacgggact
gctgccgatccgtcgacagtgcgcccgccattagatatcgacccgcctgtgtcgagcaac
gtggagaaccggggtgcacgcgtgccactttctgcaaagcgtacgaaagagctcgagcgg
gaagccaaggagcgggagtacgtggacggccagcatccgaactacatcgatggcgtttgg
cactgttcgaactgtggttgcccggagagcattgctattggtcgccgcaaaggtccgctg
ggagacaagtcacagtgcggtgcatgcggaaaattctggcataggcaccgacgcccacga
cctgtggagtacaactccagcctggaatatcattcaaacatcaagaaggaggaggagatg
gcgaggctcgcggcatccaggagaaagcggccccatgcgcacgtagctgaggcatcgtcg
aaggctcccacggtcgagccagagactccaaggaaaccgtctccggagccggacagcaag
cccgtctcccgcagcacagtcttggagacgccgaaactaccgaagatcgaaaagaccgag
gccgcgtcgcccatgtctaccacttccagcatctcggaaaccccgttggcaacgaggggc
aaaacgaatggtgttcactctactccgtccgcacccgccatcgctcccagtcagagtgaa
tcttcggagggcattcaggatacaccgcaggactcgcatgctgtccttccctccgtcgca
ccccactccggggccggaccgcgcgctggtggaaaccgtcctgcgagagaccctcccgct
tggttaaaggaagccatgaaagaactaaatgataaataccccgatgatagatttgaggct
gtgcttcgtagaggaccgaaccccgcacaaccggaatggcgcatcaagtgcacagattgt
cctggaaaactctatacccccggtcctggagagactctgactaattatgaagtgcatctt
aagaaccgccagcatcgacagaaggtcaacgcccgaatcgggaatggccaatcctaa
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integrated database retrieval system