Phanerochaete carnosa: PHACADRAFT_254246
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Entry
PHACADRAFT_254246 CDS
T03128
Name
(RefSeq) hypothetical protein
KO
K12584
m7GpppX diphosphatase [EC:
3.6.1.59
]
Organism
pco
Phanerochaete carnosa
Pathway
pco03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pco00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
PHACADRAFT_254246
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pco03019
]
PHACADRAFT_254246
Enzymes [BR:
pco01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.1 In phosphorus-containing anhydrides
3.6.1.59 5'-(N7-methyl 5'-triphosphoguanosine)-[mRNA] diphosphatase
PHACADRAFT_254246
Messenger RNA biogenesis [BR:
pco03019
]
Eukaryotic type
mRNA degradation factors
5'-3' decay
Other 5'-3' decay factors
PHACADRAFT_254246
3'-5' decay
Other 3'-5' decay factors
PHACADRAFT_254246
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DcpS
DcpS_C
BCS1_N
Motif
Other DBs
NCBI-GeneID:
18916022
NCBI-ProteinID:
XP_007394712
JGI:
Phaca1_254246
UniProt:
K5X286
LinkDB
All DBs
Position
Unknown
AA seq
319 aa
AA seq
DB search
MIRVALKGVDSLRLFKFERILNEDPVAHSLTLLGTLPDVNDSDKTLQAIIRVEKTALPAQ
QATTLVTHFVKDVQLMENTDIYTWFMGWLEASREHPDLKINVVCPATELHIRKYTKQDLV
MVRETPELFQRIVKPYIDAFPPSRTQWVEDILSGESEAEKILHRAPSPDYGYVILPDMKW
DLITIPALYLVAIANSRSIRSLRDLRKIHLPMLRSIRFEATRIVKEKWGLTDGAIRFFVH
YQPSYYHFHVHIVNANYYGTMGSTVGQAHLLDDIISLLELDSDSYEGPSIFERLTLTYGL
GNQHDLYEPMKQAQTDLDD
NT seq
960 nt
NT seq
+upstream
nt +downstream
nt
atgattcgcgtagctttgaagggtgtcgactcgctccgactcttcaagtttgagcgtatc
ttgaacgaagaccccgttgctcacagcctgaccctgttggggacccttccagacgtgaac
gactcagacaagacgttacaagcgattatccgagtcgagaagactgctcttcccgctcaa
caggctaccacgctcgtcacacactttgtgaaggatgtgcagctcatggagaatacggat
atctatacatggttcatgggatggcttgaagcatctcgcgaacatccggacctcaagatc
aacgtcgtatgtcctgcgaccgaactccatattcgcaagtatacaaagcaagacctcgtc
atggtacgagagactcctgagttattccagaggattgtgaaaccatacatcgatgcgttc
ccgccttcacggactcagtgggttgaagatatcctctccggcgagtctgaggcggagaag
atcttacatcgcgctccatcgccagactacggctatgtgatcctgccggacatgaagtgg
gacctcatcaccattcccgccctttacctcgtcgctatcgcgaactcgcgctcaatacgc
tccctgcgagatctgcgcaagattcacttgcctatgctccgaagtatccgctttgaagcg
actcggatagttaaggagaaatggggccttaccgacggcgcgatccggttcttcgtacat
tatcagccttcctattaccattttcacgtgcatatagtcaatgctaattactacggcact
atgggtagcacggtcgggcaggctcatctgttggacgatatcatctcgctgcttgaactt
gactcggattcgtacgaaggcccgtctatcttcgagagactgaccttaacatatggcctg
ggcaaccaacatgacctctatgagcccatgaagcaagcccagacggacctcgacgactag
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integrated database retrieval system