Phanerochaete carnosa: PHACADRAFT_254258
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Entry
PHACADRAFT_254258 CDS
T03128
Name
(RefSeq) hypothetical protein
KO
K12843
U4/U6 small nuclear ribonucleoprotein PRP3
Organism
pco
Phanerochaete carnosa
Pathway
pco03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pco00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
PHACADRAFT_254258
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pco03041
]
PHACADRAFT_254258
Spliceosome [BR:
pco03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
PHACADRAFT_254258
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PRP3
Prp3_C
Motif
Other DBs
NCBI-GeneID:
18916027
NCBI-ProteinID:
XP_007394721
JGI:
Phaca1_254258
UniProt:
K5V2W7
LinkDB
All DBs
Position
Unknown
AA seq
611 aa
AA seq
DB search
MSDRKRAFEGNGDSGVAKKARSDANASHARSPAPSATADLIAQKRAEITAKIAAMKKGAP
STSASTSAVATPSPVSTPPVPATPHSASPAPAGTPTDDLARRVAEAKRRVADAQNKLAVK
DNPYMSLPQASKNKKQPSAESTQQGAGLKMAAHPLLLDNTPTAPQSKKDRYKPMQPKFAS
IKANARNAPTPPPAPTPTVPIETASNPYASGAATPDSGFEGAPKERSGRQFRFNPKGKYV
QIGNQVRQEAQLEQLKQRIAESAKKAGLDTEFETLEKNIRREPPPDAEWWDAALLLNKTY
DDLALGTRGMNIRNQGSPITIYIQHPIPIPAPGDKNKVALKPMKLTKKEQKKLRKQRRQA
ELQDKRDRIRMGLIPPDPPKVRLANLMKVLTSDAVQDPTRVEARVRREVAMRKHQHEKMN
TERKLTDEQRREKIETKKIEEEKRGLFGAVFKVKALSDPAHRFKVRKNAEQMNLTGACIF
HPQFSMVYIEGAHKFIRQYKRLMLHRIAWTEPARERGNEEVELDEGDEGEDGSAADKGKA
RAVTPAEGEAVSLEDNKCWLIWEGQLRDRSFSNFKPKSCPTDTAAKEVLGQKLAGYWDQA
KNWKPEEEELF
NT seq
1836 nt
NT seq
+upstream
nt +downstream
nt
atgagtgacagaaagcgggcgtttgaggggaatggcgactcgggggtcgccaagaaggct
agaagcgatgctaacgcatctcatgctcggtccccagccccttcagccacagcggacctc
attgcccagaagagggctgagattactgcaaagatagcagcaatgaagaaaggcgcgcca
tcgacatcagcttcaacgtccgcagtcgcaaccccgagccccgtgtcaacaccacctgtc
cccgctactccacattcggcatctcctgcacctgcaggtacacctactgatgacttggcg
cgacgtgttgcggaagcgaagaggcgtgttgcagacgcgcagaacaagcttgcggtgaaa
gacaatccttacatgagcctaccgcaagccagcaagaacaagaagcagccatctgcggag
tctacccagcagggtgctggtttgaaaatggcagctcaccctctgctactggacaacacg
cctaccgccccgcagtcaaagaaggatcgctataagcctatgcagccgaagttcgcgtct
atcaaggctaacgctaggaatgcgccgacaccccctcctgctcctacacctactgtgccc
attgagactgcgtcgaatccttacgcgtccggcgcggcgacacctgacagcggctttgag
ggcgcgccaaaggagcgttctggccgccagttccgcttcaaccccaagggcaagtatgtg
cagatcggtaatcaggtccggcaagaggcacagctggaacaactcaagcagaggattgcg
gagagcgcgaagaaggccggattggacacagagtttgaaacacttgagaagaacatccgc
cgagaaccgcctccagacgcggaatggtgggatgccgcgctgcttctgaataagacgtac
gacgacttggctcttggtacgaggggcatgaacatccgcaatcaagggtcgcctatcacg
atctacatccagcacccaattcctatccctgcacctggtgataagaacaaggttgccctc
aagccaatgaagctcaccaagaaggagcagaaaaagctgcggaagcagcgccgtcaagct
gagttgcaagacaagcgagaccgaatacgtatgggcctcattccccccgatccgccgaag
gtccgcttggcaaatctcatgaaagtcttgacatcggatgctgtgcaagaccctactcgc
gttgaagctcgagtgagacgtgaggtcgcgatgcgcaagcatcagcacgagaaaatgaac
actgagcgcaagctaaccgacgaacaaagacgggagaagatcgagacgaagaagatcgag
gaagagaagaggggcctctttggagccgtctttaaggtgaaggcactctccgaccccgcg
caccgcttcaaggtcaggaagaacgccgagcagatgaacctcacaggagcgtgcatcttc
cacccgcagttctcgatggtctacatcgaaggcgcacacaagttcatccggcagtacaag
cggcttatgctgcaccgtattgcgtggacagagcctgcgcgcgagcgcggcaacgaggaa
gtcgagctcgacgaaggtgatgagggcgaggacggcagcgcggccgacaaaggcaaggcg
cgcgcagttacccctgccgaaggagaggccgtgtctcttgaggacaacaaatgctggctt
atctgggaaggccagctccgcgaccggtccttcagcaacttcaaaccgaagagctgtccc
accgacactgccgcgaaggaagtgctcgggcagaagcttgctggctactgggaccaggcg
aagaactggaagccggaggaggaagagttgttctga
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