Phanerochaete carnosa: PHACADRAFT_254599
Help
Entry
PHACADRAFT_254599 CDS
T03128
Name
(RefSeq) hypothetical protein
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
pco
Phanerochaete carnosa
Pathway
pco00260
Glycine, serine and threonine metabolism
pco00460
Cyanoamino acid metabolism
pco00630
Glyoxylate and dicarboxylate metabolism
pco00670
One carbon pool by folate
pco00680
Methane metabolism
pco01100
Metabolic pathways
pco01110
Biosynthesis of secondary metabolites
pco01200
Carbon metabolism
pco01230
Biosynthesis of amino acids
pco01240
Biosynthesis of cofactors
pco04981
Folate transport and metabolism
Module
pco_M00141
C1-unit interconversion, eukaryotes
Brite
KEGG Orthology (KO) [BR:
pco00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
PHACADRAFT_254599
09102 Energy metabolism
00680 Methane metabolism
PHACADRAFT_254599
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
PHACADRAFT_254599
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
PHACADRAFT_254599
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
PHACADRAFT_254599
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
PHACADRAFT_254599
Enzymes [BR:
pco01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
PHACADRAFT_254599
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SHMT
Aminotran_1_2
DUF5768
Beta_elim_lyase
DegT_DnrJ_EryC1
Motif
Other DBs
NCBI-GeneID:
18916100
NCBI-ProteinID:
XP_007394893
JGI:
Phaca1_254599
UniProt:
K5WCR8
LinkDB
All DBs
Position
Unknown
AA seq
480 aa
AA seq
DB search
MASSSTPDFNRPLYTPLAEIDPEVQNIIDKETWRQFSGLELIASENLTSRATMEANGSIL
TNKYSEGLPNARYYGGNEWIDELEVLCQKRALEAFHLAPAKWGVNVQPYSGSTANFAALT
ALLQPQDRLMGLGLPDGGHLTHGYYTAKKKMTASSIYFQSFPYGLDPATQLIDYEGLKKQ
ARIFKPRLIICGASAYPRDWDYAALRAIADEHGAFLMADIAHTSGLVAAGELADPFEYCD
VVTTTTHKTLRGPRAGLIFFRKDSDKAADLGKRVNDAVFPACQGGPHNNTIAGIATTLLQ
ATQPTWKAYAQQVIANAKTLGDELVARGYKLQTSGTDNHLVLWDLRPLGLTGSKLEKLCD
LVGITINKNAVSGDASAQVPGGIRLGTSALTSRDMMEADTKVVADFLHRAVQISLVLQKE
AGSKLLKDFVRVAIKPEEGKVGYQQVKDLGKEVRAFARRWPLPGVDVSTLKRPAGIHEDE
NT seq
1443 nt
NT seq
+upstream
nt +downstream
nt
atggcctcctcatccacccccgacttcaacaggcccctctatactcctctcgccgagatc
gaccctgaggtccaaaacatcatcgacaaggagacatggcggcaattctccggcctcgag
ctcatcgcctctgagaatttgacaagtcgggcaacgatggaggccaacggctcgatcctc
accaacaagtattctgagggtctccccaacgctcggtactacggcggcaacgagtggatt
gatgaactcgaggtgctctgtcaaaagcgggctctggaagccttccacctcgcccccgcc
aagtggggtgtcaacgtccaaccctattctggcagcactgcaaacttcgcagctttgaca
gcgctcttgcagccccaggaccgtctcatgggtcttggcctgcctgatggcggccacttg
acacatggttattacactgcaaaaaagaagatgactgcgtcttcgatctacttccagtca
ttcccgtacggcctcgatcctgcgactcagttgattgactacgagggtctcaagaagcag
gcgcgcatcttcaaaccccgtctcatcatctgcggtgcttccgcatatccccgtgactgg
gactacgccgcgctccgtgccatcgcggacgagcatggcgcgttcttgatggctgatatc
gcgcacacgtccggtctcgtcgccgctggtgagctcgcggatcccttcgagtactgcgat
gttgtcacaactaccactcacaagaccctccgtggccctcgcgctggcctgatcttcttc
cgtaaggactctgacaaggctgccgaccttgggaagcgcgtcaacgacgccgtcttccct
gcctgccagggcggcccgcacaacaacaccatcgcgggtatcgctactacgctcctgcag
gcgactcagcccacatggaaggcgtacgctcagcaggtcattgcgaacgcgaagaccctc
ggtgacgagctcgtcgcccgcggttacaagctgcagacctctggcacggataaccacctc
gtcctctgggaccttcgtcctcttgggctgactggcagcaagctcgaaaagctctgcgac
ctggtcggcatcaccatcaacaaaaacgccgtctcgggtgacgcctccgcccaggtgccg
ggcggtattcgtctcggcacgtccgcgctcacatcgcgcgacatgatggaggcggacacc
aaggttgtcgcagacttcctgcaccgcgccgtccagatctcgctcgtcctccagaaagag
gcaggcagcaagctcctcaaggacttcgtccgcgtcgcaataaagcctgaggagggcaag
gtcggctaccagcaggtcaaggacctcggcaaggaggtccgcgccttcgcgcggcgctgg
cccctgcccggcgtcgacgtctccacgctcaagcgccccgcaggcatccacgaggacgag
tag
DBGET
integrated database retrieval system