Phanerochaete carnosa: PHACADRAFT_255029
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Entry
PHACADRAFT_255029 CDS
T03128
Name
(RefSeq) hypothetical protein
KO
K14308
nuclear pore complex protein Nup54
Organism
pco
Phanerochaete carnosa
Pathway
pco03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
pco00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
PHACADRAFT_255029
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pco03019
]
PHACADRAFT_255029
Messenger RNA biogenesis [BR:
pco03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
PHACADRAFT_255029
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nup54
Nucleoporin_FG
Nup54_C
Exonuc_VII_L
Motif
Other DBs
NCBI-GeneID:
18916201
NCBI-ProteinID:
XP_007395140
JGI:
Phaca1_255029
UniProt:
K5W0J6
LinkDB
All DBs
Position
Unknown
AA seq
487 aa
AA seq
DB search
MNASGTPGGGSFGNTSHTTNTTGGGLFGNTQQNTTGTAGGSLFGNPSSTSANTGGGLFGS
TANNSTSTTGNPSNFFGNTTSNNTPSLFGQTQQQKPVGSLFGTPTPQPSGGLPFGQSSTQ
QPNQPTTGSLFGQPTQQQQQQQQFQGSLFGNLNQPPATTTGGFFGNSTLGASTLGISTLG
ASTLGGTNVGAPSLGGSLLASRTTAIPLQQQQDPQSQFIALIQRIEGVKQAWDSSSPHCR
FQHYFYNLVDPAQVHFYGRPSNAVNDALWQKAVRENPDPDCMVPVIAVGFDDLQQRVDAQ
TRAAAQHQEKLKELKTRLEALSQRHQVTNLARLRRAQALQAQLTHRVLRITQHLHLLVPA
LRSSSIRPEEEALRTALEELDEDVRRPGGLGKMRSKLNELWALVDAVRAARDRDRQEGTV
EWAVVDEDGLARITQVLGEEQAGLAYVTNILQRDLKDLGIVLGVPVKEEEPNALSGSATV
LRGSLMR
NT seq
1464 nt
NT seq
+upstream
nt +downstream
nt
atgaatgcgtctggaacgccgggtggtggctcattcggcaatacctcgcacacgacgaac
acgacaggtggaggcttattcggaaacacccagcagaatactacaggaacagctggtggt
agcctgtttggtaacccgtcgagcacgtcggcgaatacgggtggtgggctgtttgggagt
actgcgaataatagcaccagcaccacaggaaatccatcaaatttctttggaaacaccact
tcgaacaacaccccttcgctcttcggtcaaacccagcagcagaagcccgtcggttcgcta
tttggcacacctacaccccagccttccggaggcttaccgttcggccagtcgtcaacacaa
caaccgaatcagcctacaaccggctctctttttggacaacccacacagcagcagcagcag
cagcaacagtttcaagggtcgctcttcggcaatctgaaccaaccaccggctacaacaaca
ggtggctttttcggtaacagcactcttggcgcatctacacttggaatatctacacttgga
gcatcgactctcggtggtacaaacgtcggtgctccatcgctcggagggagtctgctagct
tcgcgaacgaccgccatcccactacaacaacagcaggatccgcagtcccaattcatcgcg
cttatccagcgtatcgagggcgtgaagcaggcttgggactctagctcaccacattgtcga
ttccagcattatttctacaacctcgtcgaccccgcacaagtacacttctacggacgccca
tcaaacgcggtgaacgatgcgctgtggcaaaaggctgtccgggagaacccagatccagat
tgcatggtccccgttattgccgtcggcttcgacgatctgcagcaacgtgtagatgcacag
accagggccgcagcgcaacaccaagaaaagctaaaggagctgaaaactcgcctcgaagcg
ctttcacagcggcaccaggtgacgaacctcgctcggctgcggcgcgcacaggcgctgcaa
gcgcagctgacgcaccgtgtgctccgcatcacgcagcatctgcacctgctcgtgcccgcc
ctgcgctcgtcgtcgattcggcccgaggaggaggctctccgcaccgcgctcgaagagctc
gacgaggacgtccgcaggcccggcggcctcggcaagatgcgctcgaagctgaacgagctc
tgggcactcgtcgacgcagtgcgcgctgcgcgcgaccgcgaccgccaggaaggcactgtc
gagtgggcggtcgtggacgaggatgggctcgcgcggatcactcaggtgttgggggaggaa
caagctgggctggcgtatgtgacaaacatccttcagcgcgacctgaaagacctgggcatc
gtacttggcgtgcctgtgaaggaagaggagccgaatgcgttatcaggctcagcgacagtg
ttgcgagggagcctcatgcgatga
DBGET
integrated database retrieval system