Phanerochaete carnosa: PHACADRAFT_255536
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Entry
PHACADRAFT_255536 CDS
T03128
Name
(RefSeq) hypothetical protein
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
pco
Phanerochaete carnosa
Brite
KEGG Orthology (KO) [BR:
pco00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pco03016
]
PHACADRAFT_255536
Enzymes [BR:
pco01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
PHACADRAFT_255536
Transfer RNA biogenesis [BR:
pco03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
PHACADRAFT_255536
Prokaryotic type
PHACADRAFT_255536
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
Motif
Other DBs
NCBI-GeneID:
18916327
NCBI-ProteinID:
XP_007395472
JGI:
Phaca1_255536
UniProt:
K5W821
LinkDB
All DBs
Position
Unknown
AA seq
335 aa
AA seq
DB search
MPKAVSPPVSALFAVAKPSGPTSMAVVNDIKKLVTRSRLFVKEDELKKAEKQRPKKGKSA
KYAREAVKIGQGGTLDPLADGVLVIGVGKGTKRLSEFLDCVKEYRTAALLGCETDSFDSE
GAVVRVASWKHVTREKVEEALPKFRGDIQQKPPIFSALKMDGKHLYDYARQGIPLPRPIE
ARPVTVHGLDILEWKGSDHSFRYPETKFTDEQKSALEKAMHGIEDQVIVKDEPEAAASED
TPSTAFVLQMRVSGGTYVRSIVHDLGHAVGSAAHVVTLTRSRQGRFALEPSEEDNTLGCV
PWEIFKKAVEDPGESDADGWHEWERAVMDKMEVLE
NT seq
1008 nt
NT seq
+upstream
nt +downstream
nt
atgcccaaggccgtgagcccacctgtctccgcgctgttcgcggtcgccaagccgtcggga
ccgacgtctatggccgtggtgaacgacatcaagaagctcgttacgcggtcgcgcctgttc
gtgaaggaagacgagctcaaaaaggcggagaaacagcggccaaagaagggcaagagcgca
aagtacgcgcgggaggcggttaagatagggcagggaggcacgctggatcccctcgcggat
ggagtactcgttattggcgtaggcaaaggaacgaagaggctttctgagtttttggactgt
gtcaaggaataccgcaccgctgcacttctggggtgcgagacggattctttcgatagtgag
ggtgctgttgtacgcgtcgcgtcatggaaacacgtcacacgagaaaaggtggaggaagct
ctacctaaatttagaggggacatccaacagaagccgccaatattctctgccctcaaaatg
gatggcaagcacctatatgactatgcacgccaaggcatcccgctcccacggccaatcgag
gcacgacccgtcaccgtgcacgggctcgacatcctcgagtggaagggtagcgaccacagc
ttccggtacccagagacaaagttcacagacgagcagaagagcgcgctcgagaaagcgatg
cacggcatcgaggaccaggtcatcgtcaaagatgaacctgaggccgctgcttcggaggac
acaccatcgacagcgttcgtactgcagatgcgtgtgtccggcggaacgtacgtacgttcc
atcgtgcacgatctcggacatgcggttggctccgcggcacacgtcgtgaccctcacgcgc
tcgcggcagggacgctttgccctcgagccgagcgaagaggacaacacccttgggtgcgtg
ccatgggagatctttaaaaaagccgtggaggaccctggagaatccgacgcggacggttgg
cacgagtgggaacgggctgtcatggacaagatggaggttctcgagtga
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