Phanerochaete carnosa: PHACADRAFT_255854
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Entry
PHACADRAFT_255854 CDS
T03128
Name
(RefSeq) hypothetical protein
KO
K07466
replication factor A1
Organism
pco
Phanerochaete carnosa
Pathway
pco03030
DNA replication
pco03420
Nucleotide excision repair
pco03430
Mismatch repair
pco03440
Homologous recombination
pco03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
pco00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
PHACADRAFT_255854
03420 Nucleotide excision repair
PHACADRAFT_255854
03430 Mismatch repair
PHACADRAFT_255854
03440 Homologous recombination
PHACADRAFT_255854
03460 Fanconi anemia pathway
PHACADRAFT_255854
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pco03000
]
PHACADRAFT_255854
03032 DNA replication proteins [BR:
pco03032
]
PHACADRAFT_255854
03400 DNA repair and recombination proteins [BR:
pco03400
]
PHACADRAFT_255854
Transcription factors [BR:
pco03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
PHACADRAFT_255854
DNA replication proteins [BR:
pco03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
PHACADRAFT_255854
DNA repair and recombination proteins [BR:
pco03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
PHACADRAFT_255854
MMR (mismatch excision repair)
PHACADRAFT_255854
DSBR (double strand breaks repair)
HR (homologous recombination)
PHACADRAFT_255854
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rep_fac-A_C
REPA_OB_2
tRNA_anti-codon
DUF223
Rep-A_N
OB_Ssb-like
Motif
Other DBs
NCBI-GeneID:
18916408
NCBI-ProteinID:
XP_007395648
JGI:
Phaca1_255854
UniProt:
K5W851
LinkDB
All DBs
Position
Unknown
AA seq
540 aa
AA seq
DB search
MLATPLNELVENGQLTKNSIVVADEFSCNYVGENKGRLLIILRLTPLASPNEKIGSPTAI
QGAVGSNGKPISSAGGTPTPASAPKAAPKAAPQPAPAMHNNASNQQRHTFPIEGLSPYQN
NWTIRVKVTQKSDIRQYSNARGDGKLFSAVLMDDTGEIKATAFNNNVDEFYPKLEEGKIY
YISKGQVSLAKKKFNNVNNEYELGLQRGTIIEECRDGPVLNIHYKFIPLDQLMNTNPGDT
IDVLGIVKEMSDVTHLTSRQGNDLTKRELTIVDRSGASVRLTLWGKQADRYCESGEPIIA
WKSVKVGDFGGRSLSMLSSSSMEINPDIPDAHVLRGWYDTDGKVQDFQPQTSSAPRGSGG
AFNRDEIRLLDDVRSANLGGGDKPDFFSAHATIMHIKSDNIAYPACQNQGCNKKVIEQHD
GWRCEKCDKVFERPSYRYIMAMAVADHSGQVWFQCFNEAGVVIFDMTADQLVELKDRDDA
QYNKVLESAVGTTYNFTCRAKMESFQENNRVRYGVQKILPLDYKEEGNYLMKLLSSPWAQ
NT seq
1623 nt
NT seq
+upstream
nt +downstream
nt
atgctcgcgacaccgctcaacgagcttgtagaaaatggccagctcacaaagaactcgatc
gtggtcgctgacgaattctcgtgtaattacgtcggcgagaacaaaggtcgccttctcatt
atactccgcctcactcctctggccagcccgaacgagaagattggctcgcctacggccata
caaggcgcggtaggcagcaatgggaaacctatctcgtctgccggcgggacgccgacccct
gcttccgctccgaaagccgccccgaaagccgcccctcagcccgcacctgcaatgcacaac
aatgcgagcaatcagcagcgccacaccttccctatcgaaggtctcagtccttaccagaac
aactggacgatccgtgtgaaggttacgcagaagagcgatatccgccagtactcgaatgcg
cggggagatggcaagctcttcagcgccgttctcatggacgatacaggcgagataaaggca
accgctttcaataataacgtcgacgaattttatcccaagttggaggagggcaagatctac
tacatctcgaaaggtcaagttagtctcgcgaagaaaaagttcaacaacgtcaacaacgaa
tacgagcttggccttcaacgaggcaccatcatcgaagagtgccgtgacggaccagtactc
aacatccattacaagtttattccattggaccagctgatgaatactaacccgggagatacc
attgacgtgttgggtattgtgaaggagatgagcgatgtcacgcacctcacctctcgtcaa
ggcaacgatttgacaaaacgtgaattaactatcgtcgaccgctctggcgcatccgtacgt
ttaactctctggggcaagcaagcggaccgctactgcgagtcaggggagcctatcatcgct
tggaagagcgtgaaagtcggcgacttcggtggtcgcagcttgtcaatgctcagctccagt
agcatggagatcaatccggatattcctgacgcccatgtcctgagggggtggtatgacact
gacggcaaggttcaggatttccagccccagacgagctctgctccacgaggcagcggtggt
gccttcaaccgtgacgagattcgcttgttggatgacgtccgaagcgcgaacctcggtggc
ggagataagcctgacttcttctctgctcatgcgacgatcatgcatatcaagtcggataac
atcgcatacccagcgtgtcagaaccaaggctgcaacaagaaggtgatcgagcagcacgac
ggctggcgttgcgagaagtgtgacaaggtgtttgaaaggccttcctaccgctacatcatg
gctatggctgtcgccgaccactccggtcaggtgtggttccaatgcttcaatgaagctggt
gttgtcattttcgacatgactgccgatcagctcgtagaactcaaggatcgcgacgatgca
cagtataataaggtactcgaaagcgccgttggcacgacgtacaacttcacctgtagagcg
aagatggagagcttccaggaaaataaccgtgttcgctacggtgttcagaagattcttcct
ctcgactacaaggaagaaggcaactacctcatgaaacttctgagctcgccttgggcacag
tag
DBGET
integrated database retrieval system
