Phanerochaete carnosa: PHACADRAFT_258377
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Entry
PHACADRAFT_258377 CDS
T03128
Name
(RefSeq) hypothetical protein
KO
K11367
chromodomain-helicase-DNA-binding protein 1 [EC:5.6.2.-]
Organism
pco
Phanerochaete carnosa
Brite
KEGG Orthology (KO) [BR:
pco00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pco03021
]
PHACADRAFT_258377
03036 Chromosome and associated proteins [BR:
pco03036
]
PHACADRAFT_258377
Transcription machinery [BR:
pco03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
PHACADRAFT_258377
Chromosome and associated proteins [BR:
pco03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
SAGA complex
PHACADRAFT_258377
SLIK complex
PHACADRAFT_258377
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
HTH_Hrp3
Helicase_C
CHD1-like_C
Chromo
HDA2-3
ResIII
DEAD
Cdh1_DBD_1
FlhC
CDH1_2_SANT_HL1
AAA_22
Motif
Other DBs
NCBI-GeneID:
18917097
NCBI-ProteinID:
XP_007397188
JGI:
Phaca1_258377
UniProt:
K5WVL5
LinkDB
All DBs
Position
Unknown
AA seq
1433 aa
AA seq
DB search
MMASDHSPVNPTSGSSDESDDHNMQVDSDVDVPKDVDIDADGEYDDDDELEDTAQVTHTV
PSSSAYLSKRAVKDEEDSDDPEPASDDDEDASYADEEYGVAKKKAPKKKKQPSKPRVTVR
HSPSDSDSDYGARSKKKKKPRIPSDEIRVSSRGTKVPNYIDDVQDFEQFDDDEIDAGTYG
GPQVVKEEDEIEMVLGHTRDEQHLSDPEDNWYTNTRFHIKWKNFSHLHNTDEMYEFLKRF
KGVKRVDNYIKAYKLYLERVNAPGLSREDKEALLLDKEREKEEFETYKTVERIIAQRENA
ENHVEYFVKWNNLNYDHCTWELQDEIRPIAKEQIDAFRTREAEAKFPYKSAMYAKNSRPA
FKKITEDPQYLVKTGGELKDFQLTGLNWLAYLWSNGENGILADEMGLGKTVQSVSFLAYL
FHEMRQFGPFLVIVPLSTITAWQSQFATWGPDLNVITYIGNANAREVIRTFEFGPSNKKL
KMNVLLTTYELTLRDARELSDIKWQVLAVDEAHRLKNSESQLYEALRAFSAASKVLITGT
PLQNNVKELLSLMHFLMPEKFHLSNEFDLTDVDHEEKIKELHKQLEALMLRRLKKDVLTS
LPTKSERILRVEMSALQTHLYKNILTKNFQGLIKSANGNTNISLLNIAMELKKAANHPYL
FEGVEPESATSEELLKGLVMNSGKIVLLDKLLARLRQDSHRVLIFSQMVRMLDLLSEYMQ
LRGYQFQRLDGMVSSEARKKSIAHFNAPGSPDFAFLLSTRAGGLGINLETADTVIIFDSD
WNPQNDLQAMARAHRIGQKSHVSVYRFVSKDTMEEDVLERAKKKMVLEYAIINQMDTSQA
HLSSKAGATKENTKPNDLSKDELHAVLKYGAQKIFDKDDSQQNQKLDEMDLDDILKTAEQ
HETMAANNEGASLGGEGFLAQFANVSDVKNDMSWEDIIPVEERQKFEEEEAKRKAEELAA
QERESKDRKRSHAPVSYEGMDVEQPAPTPAPKKPKHPAPQRKTASQKAMELKERDVRVLI
RSLQRWGDIRQRYDVIVQEAKLQDKNRGMIIDTSDDIVELCAHAVSQANQEKRTRMEAGE
QLTNAQKSKAVLVTYRNVGNINAETVLSRHRDLQVLFKYLSELDDPYQWTIPIDNIRPTL
NWSGRWGPQDDAMLLVGAYLYGFGNWEAMQKDPRLGLEGKFFLEEGKKGEDTSTRPIPNA
IHLVRRGDYLLGILREHDEKIRAIESTLQRKSSGGYKTSLSPPPPAASTSYSSSVRRRAE
SEAVASVEEGSTKKRKRRPTPTFTDSSSSDECPSMDEAATKEELRPVKKQLKNLKLSGGD
MPRDDKVAILKESLAAIGKRIEYVLEQKAKSGEDAKRWKRHLWTFVTLFWPKKVKAAKLE
EIHAKMVMKESSSAPRAGSSDPTATKKPRLSSTGAPSRSNGPSSSSHVNGKYR
NT seq
4302 nt
NT seq
+upstream
nt +downstream
nt
atgatggcctccgaccactcccccgtaaaccccactagcggcagtagcgacgagagcgac
gaccacaacatgcaggtcgactctgacgtcgatgtcccgaaagatgtcgacatcgacgcc
gacggcgagtacgacgacgacgacgaactcgaagacactgcccaagtcacccacactgtg
ccttcgtcttctgcctacctctccaaacgtgcagttaaagatgaagaagactcggatgat
cccgagcctgcttcggatgacgatgaggacgcctcgtacgccgacgaggagtacggggtg
gccaagaagaaggctcctaagaagaaaaaacagccgtcgaaaccgcgagtgaccgttcgc
cactcgccgtccgattcagattcagattatggcgcacggtcaaagaagaagaagaaacct
cgcattccgagcgacgagatccgcgtctcgagtcgaggcaccaaggtcccgaactacatc
gacgacgttcaggacttcgagcaattcgatgacgacgagatagatgcaggcacgtatggc
gggccccaggtggttaaggaggaggatgagattgagatggtgcttggccatactcgggat
gaacagcacctaagcgacccagaggataattggtataccaacaccaggttccatatcaag
tggaagaacttctcgcacctccacaatactgatgagatgtacgagttcctgaaacgtttc
aagggtgtcaagcgtgtggacaactacatcaaggcatacaaactctacctagagcgagtc
aacgccccaggcctttctagagaagacaaggaagctctactgctggacaaagagcgcgag
aaggaagagtttgagacttacaagacggttgagcggataattgcccagcgggaaaacgcg
gaaaaccatgtcgagtacttcgtcaagtggaataacctcaactacgaccactgtacatgg
gagctgcaagacgagattcgtccaattgcaaaggaacagattgacgcattcaggacgcgc
gaagctgaagccaagttcccatacaagagcgctatgtatgcgaagaactcacgccccgca
ttcaagaagatcacggaggacccacaatacctcgtgaagacaggcggagagctcaaggac
ttccagctcactggtctcaactggctcgcatatctctggagtaatggcgaaaacggtatc
ctcgccgacgaaatgggactcgggaagactgtgcagagtgtttcgttcctggcatatctc
tttcatgagatgagacagttcggtcccttccttgttatcgttcctctctcgacaatcacc
gcatggcaatctcaattcgcgacatggggtcctgacctcaacgttatcacgtatatcggc
aatgctaacgcccgcgaggtcatccgcacctttgagttcggtccttcaaacaagaaactg
aagatgaacgtcctcttgacgacctacgagcttactcttcgggatgccagggaactcagc
gacatcaaatggcaagttcttgccgtggatgaggcccatcgcctaaaaaattccgagagc
cagctgtacgaggccctgcgagctttctccgccgcgtccaaggttcttatcaccgggacg
ccacttcaaaacaacgtcaaagaactgctgtcattgatgcacttcttgatgccagagaaa
ttccacctttcgaacgagttcgatctcaccgatgtggatcatgaggagaagatcaaggag
ttgcacaagcagttggaggcgttgatgctgcgtcgtctcaaaaaggacgttctaacatca
ctgcccacgaagagcgagcggatccttcgagtcgagatgtcagctctgcagacgcacctg
tataagaacatcttgactaagaacttccaaggcctcatcaagagcgccaacggtaacacg
aacatcagcttgttgaatatcgcaatggaactcaagaaggcggccaatcatccctatctc
ttcgagggcgttgagccggaatctgcgacgagcgaggaactcttgaaaggtcttgtcatg
aatagcggcaagatagtgctccttgataaactcctagctcggctacgtcaagacagccat
cgcgtactcatctttagtcagatggttcgcatgctggatctgctcagcgagtacatgcag
ctgcgtggctatcagttccagcgtctcgacggcatggtctcgtcggaggctaggaagaag
tcgatcgcccatttcaatgcccccgggtcaccagacttcgctttcctcctttcgacgcgc
gcaggcggtcttggtatcaacctcgagacagccgataccgtaatcatcttcgacagcgat
tggaacccgcagaacgacctgcaggccatggcacgtgcgcatcgtatcggccaaaaatca
cacgttagcgtgtaccggttcgtgagcaaggacactatggaggaagacgttctggagcgg
gcaaagaagaagatggtcctcgagtatgcgattatcaaccaaatggacacgtcgcaagca
cacctcagctccaaggcgggcgctacgaaggaaaatacgaagccgaacgacctcagcaag
gacgagctgcatgctgtcctcaagtatggcgcgcagaagatctttgacaaggatgacagc
cagcagaatcagaagctggatgagatggatctcgatgacattctgaagactgccgagcag
cacgagaccatggccgccaacaatgaaggggcctctctcggtggtgaaggtttcttggct
cagtttgcgaacgtcagcgatgttaagaacgacatgagctgggaggacatcatccccgtt
gaggagcggcagaagttcgaggaagaggaggcgaagcgtaaagccgaggagctagccgct
caggagagagaatcaaaggatcgcaagcgttcccacgcaccagtttcctacgagggcatg
gacgtcgagcaacctgctcctactcccgccccgaagaaacccaaacatcccgctcctcag
cgcaaaaccgccagccagaaggccatggagctcaaggagcgcgatgtccgggtccttatc
cggagtctgcaacgatggggtgatatcaggcagcgatacgatgtcatcgtacaagaggct
aagcttcaggacaagaaccgcggcatgatcatcgatacatccgatgacatcgtcgaactg
tgtgcacatgcagtgtcacaggcaaaccaggagaagcgaacccgtatggaagctggtgag
cagctgaccaatgcgcagaagagcaaggcagttctcgtcacctaccgcaacgtcgggaat
atcaatgcggagaccgttctctcgaggcaccgagatctccaagtcctcttcaagtacctc
agtgaactcgacgacccctatcagtggacgatacccatcgacaacatccgcccgacattg
aactggtcagggagatgggggccccaagacgacgcaatgctgctggtcggcgcgtatctg
tacggctttggcaactgggaggcgatgcagaaggatccccgactggggctcgagggcaag
ttcttcttggaggaagggaagaagggcgaagacacctctacgaggccgatacctaacgcc
attcaccttgtgcgcagaggagactacttgctcggcatcctcagggaacacgacgagaag
attcgtgcgattgagagcacgctgcagcgcaagagcagtggtggatacaagacctcgctg
tcgccgccaccgccggccgcttcgacatcgtatagctcatctgtcaggaggagggctgag
agtgaggctgtggcgtctgtcgaagagggcagcacgaagaagcggaagcgtagaccaaca
cctaccttcaccgactcttcgtcatctgatgagtgtccttcaatggatgaagctgcaacc
aaggaggagctccggccggtcaaaaagcagctcaaaaacctcaagctgtccggaggagac
atgccgcgtgacgataaggtcgccattctcaaagagtcgctcgctgccattggcaagcgt
atcgagtacgtactcgagcagaaggcgaaatccggagaagacgcaaaacggtggaagcgg
cacctctggacgttcgtcacgctgttctggccgaagaaggtcaaggctgcgaagctcgag
gagatccacgcgaagatggtcatgaaggagagctccagtgcaccccgcgctggctcttca
gatcccaccgcgacgaagaagcctcgtctcagctcaactggcgcaccatcacgtagcaat
ggtccttcaagctcgtcccatgtcaacggcaagtaccggtga
DBGET
integrated database retrieval system
