Phanerochaete carnosa: PHACADRAFT_258558
Help
Entry
PHACADRAFT_258558 CDS
T03128
Name
(RefSeq) hypothetical protein
KO
K10839
UV excision repair protein RAD23
Organism
pco
Phanerochaete carnosa
Pathway
pco03420
Nucleotide excision repair
pco04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
pco00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
PHACADRAFT_258558
09124 Replication and repair
03420 Nucleotide excision repair
PHACADRAFT_258558
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
pco03051
]
PHACADRAFT_258558
03400 DNA repair and recombination proteins [BR:
pco03400
]
PHACADRAFT_258558
Proteasome [BR:
pco03051
]
Eukaryotic proteasome
Proteasome interacting proteins (PIPs)
UBL-UBA shuttle proteins
PHACADRAFT_258558
DNA repair and recombination proteins [BR:
pco03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
XPC-HR23B-CETN2 complex
PHACADRAFT_258558
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UBA
ubiquitin
XPC-binding
UBA_7
Rad60-SLD
Ubiquitin_2
Rad60-SLD_2
CUE
Ubiquitin_5
OTU1_UBXL
Crinkler
UBA_HYPK
UBA_9
Motif
Other DBs
NCBI-GeneID:
18917144
NCBI-ProteinID:
XP_007397283
JGI:
Phaca1_258558
UniProt:
K5W6L4
LinkDB
All DBs
Position
Unknown
AA seq
415 aa
AA seq
DB search
MKITVKTLQQKTFQLDAEPSETVADLKKKIEEGHGHPVATQKLIYSGQVLGDDKTVESCN
IKEKGFLVLMVAKPKAEPKPAAAATPAAAAAATSAAPSNPPAAAPAAAPAPATSIPAAAP
PQPPNAPILTPAQAAPVSTPAQSARAINDENAFVTGADLQTAVQNMMEMGFEREQAMRAL
RASYNNPERAVEYLFNGIPSHLEDVAAGTRAPQAQAPATPASAPAPAQAAQAPVPIPVEQ
LPRAPPAAGQPQNLFQLAQQQQAQQPGAAGARQPGQPGLSLPGGGGGGGGGLDISQLQSQ
PQIQHLRQLLQQNPALIQPVLHQLAQSNPELAELFTQHPEAIAQAIGLTPDDLEGGGDIP
EGAHVIHVTEEEQAAIQRLQDLGFSRAAAIEAYFACDKDEAMAANYLFDSENQAD
NT seq
1248 nt
NT seq
+upstream
nt +downstream
nt
atgaagatcaccgtgaaaaccttgcagcagaagaccttccagctcgatgctgaaccttcg
gaaactgtagccgatctgaagaagaagattgaggagggacatggtcatcctgttgcaact
cagaaactcatctactcaggtcaggtcttgggcgacgataaaactgtggaatcatgcaac
atcaaggagaagggattcttggtgcttatggtagcaaagcccaaagccgagcctaaacct
gctgctgctgccactcctgctgctgctgctgctgctacttctgctgccccaagtaaccca
cctgccgctgcaccagccgccgctcccgctcccgcaacatcaatacccgctgctgcccca
cctcagcccccaaatgccccaattctcacacccgctcaggctgctcccgtctccacacca
gcccaatccgcccgcgctatcaatgacgagaacgcattcgtcactggggcagaccttcag
acagccgtgcagaacatgatggagatgggcttcgagagagagcaggcgatgcgcgctctg
agagcaagttacaacaaccctgagcgtgccgtagagtacttgtttaatggtatcccttct
cacctcgaagacgttgccgcaggtactcgggcgcctcaggcacaagctcccgctaccccc
gcttctgctcccgcccctgcccaggcagcccaggcgccagtgcccatccctgttgagcag
ctcccacgggctcctcccgcggctggccaaccgcagaacttattccagctcgctcaacag
caacaggctcagcagcccggtgccgccggtgcacgccagcctggtcagccaggactcagc
ctcccggggggtggcggtggcggtggtggtggccttgacatcagccaactgcagagccag
ccacaaatccagcacctccgccagctcttgcagcagaatccggcgctcatccagcccgtg
ctccatcagctcgcgcagtcgaacccggagcttgcggagctcttcacacagcaccccgaa
gctatcgcccaggcgattggcttgacgcccgatgaccttgagggtggcggcgacatacct
gagggcgcgcatgtcattcacgtcactgaggaggagcaggcggcaatccagcgtctccaa
gatcttggtttctctcgagcagctgctatcgaggcatactttgcttgcgacaaggacgag
gcgatggccgcgaattacttgtttgattctgaaaaccaggccgattaa
DBGET
integrated database retrieval system
