Phanerochaete carnosa: PHACADRAFT_258595
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Entry
PHACADRAFT_258595 CDS
T03128
Name
(RefSeq) hypothetical protein
KO
K03126
transcription initiation factor TFIID subunit 12
Organism
pco
Phanerochaete carnosa
Pathway
pco03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
pco00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
PHACADRAFT_258595
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pco03021
]
PHACADRAFT_258595
03036 Chromosome and associated proteins [BR:
pco03036
]
PHACADRAFT_258595
Transcription machinery [BR:
pco03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
PHACADRAFT_258595
Coactivators
SAGA/TFTC/STAGA complex
PHACADRAFT_258595
Chromosome and associated proteins [BR:
pco03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
PHACADRAFT_258595
STAGA complex
PHACADRAFT_258595
TFTC complex
PHACADRAFT_258595
SAGA complex
PHACADRAFT_258595
SLIK complex
PHACADRAFT_258595
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TFIID_20kDa
CBFD_NFYB_HMF
DUF3391
TFIID-31kDa
Motif
Other DBs
NCBI-GeneID:
18917156
NCBI-ProteinID:
XP_007397307
JGI:
Phaca1_258595
UniProt:
K5VSX6
LinkDB
All DBs
Position
Unknown
AA seq
264 aa
AA seq
DB search
MPQLSELAKQGKLNPQQIKQLKEYVDKYKIAPNNKPAPPPPPEPAAPNPNLKTSTSPFLS
QSPANEASYPISATPPAVTGTGPQQWQTAQQGRPSLTAGIASGRIAGAPAQIARSADDAS
YTFEDTRARRKNAPGDQSMRRTIQDLVASIDPNVKIEPEVEDLLLDIADEFIDSVTNFGC
RLAKHRNGDTLEVRDLQLHLERNHNIRIPGFASDDTRISLSQTAIAPAATGGSTNKKGTQ
SSQVTQRQQRLAQVQQAKREAKLL
NT seq
795 nt
NT seq
+upstream
nt +downstream
nt
atgccccaacttagcgagctcgccaagcaggggaagctgaatcctcaacagatcaagcag
ttgaaagagtatgtagataagtacaaaatcgcccccaacaacaaaccggctccacctcca
cctcctgaacctgccgctcctaaccctaatctcaaaacttccacgagtccgttccttagc
caaagtcctgcaaatgaagcctcgtaccccatcagcgcgactcctccggccgttacaggg
actggtccgcagcaatggcagacagcgcagcagggcagaccgagtttgacagctggaatc
gcatcagggaggatagctggagcccccgcgcagatcgcgaggagcgcagacgacgcgtca
tacacgtttgaagatacaagggctcgcaggaaaaatgcgcctggcgatcagagcatgcgg
agaacaatccaggatctggtcgcgagcatagaccccaacgtgaagatcgagcccgaggtt
gaagatctccttttggacatcgcggacgagttcatcgactccgtcacaaacttcggctgc
cgactggcgaaacaccgtaatggcgacacgctcgaggtgcgagatctccagctacatctg
gagcggaaccacaatattcgtatacctggcttcgcatctgacgatacccgaatatcactg
tcgcagacggcgatagcacctgctgccactggtggcagcacgaataagaagggcacgcag
agcagtcaagttacacaacggcaacaacggctggcacaagtgcagcaggccaaacgggag
gcgaagctcctgtag
DBGET
integrated database retrieval system