Phanerochaete carnosa: PHACADRAFT_260396
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Entry
PHACADRAFT_260396 CDS
T03128
Name
(RefSeq) hypothetical protein
KO
K10589
ubiquitin-protein ligase E3 C [EC:
2.3.2.26
]
Organism
pco
Phanerochaete carnosa
Pathway
pco04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
pco00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
PHACADRAFT_260396
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pco04121
]
PHACADRAFT_260396
Enzymes [BR:
pco01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
PHACADRAFT_260396
Ubiquitin system [BR:
pco04121
]
Ubiquitin ligases (E3)
HECT type E3
PHACADRAFT_260396
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HECT
Motif
Other DBs
NCBI-GeneID:
18917724
NCBI-ProteinID:
XP_007398522
JGI:
Phaca1_260396
UniProt:
K5W409
LinkDB
All DBs
Position
Unknown
AA seq
1030 aa
AA seq
DB search
MDFPLFGDGPGGRRREINLGGLITATSQTSLLQDAKARRMQRNDLRKRQESATRIQSWWR
GRKHAQRVRSELRRTFEDNITNITGLRCLVLIGKDEALLGRWAEAILVDNAAHLIEAGSD
PTWTISLRKVSVLLLHAVSDSPLSSAADAQLRVIEALLSPQSSSKLSSAQMELLSYLLNH
GYYSLLGRAISRVPAQSKSIPSLPTLVSLSVLPFTLLDPASPQFMLAVIHFFSGVLTVPL
LPNRLPLLSLTFLAPRIPLQHLTVDIVPRVLAFITSDDARVQLLANLTAFAPPRYNALPA
PAVATYLRLTAETMMVLPIHALEPPERNTPRSNAWAGDDEESDEGESSTHVEVVSIFTAP
SRPLPTLDSKTRMRLQTLPSPAHLNSLVSVAYKHTGNTSREALVKWLQALSTIWPSRRDR
IAGVVVAWSGGGLVREVYRGYVRRNPFGTAGNVAALTDPAHAAHWPPLLFLVDLYNQALL
TMGDDEFFSSSPTTLSSATLAASTATTTITARNPLTLDEIASFSKQLLSIVFVLYWREDQ
TNVSEATVPGIPNLSLENVRERMTKLLQAIHARDSRRPFTPPDHWLMTSQVDIGPFVDAA
IYEESQMSHDTTGTAPRNLSKRQIALLSPRLGVLNNIPFAIPFDVRVSIFRSFVQNDAAA
RGYNLRSRHAGFNPPVRVTVRRGNIAQDGFNRLGDVDLKGPIAITFIDQFGQEEAGIDGG
GVFKEFLTELCKEVFDTDRGLWLASKKNELYPNPHSYATESGSLAWYRFIGRILGKALYE
GILVDVAFAGFFLAKWLGKQSFLDDLASLDPELYQGLIFLKHYTGNPEDLSLTFAVTSEE
FDVTRTIPLIPNGDQIPVTRENRLQYIYLISHYRLNKQIKRQSDAFFEGLSEMIDPKWLR
MFNQQELQILLGGVNSPIDLDDLRTNTQYGGLFNDHESTIEMFWRVVNTFNQDQRRALLR
FATSCSRPPLLGFKELVPNFAVRDAGSDENRLPTASTCVNLLKLPRYTSERMLREKLLQA
IQSNAGFDLS
NT seq
3093 nt
NT seq
+upstream
nt +downstream
nt
atggacttccctcttttcggcgatggccccggggggcggcggcgtgaaatcaacctaggt
ggacttatcaccgcaaccagccaaacgtcgttgttacaggacgcgaaagcacgacgcatg
cagcggaacgacttacgcaagcggcaagaaagcgccacgcgcatacaaagctggtggcgc
ggtcgcaagcatgctcaacgtgtgcgcagcgagctcagacggacatttgaggataacatc
acgaatatcactggcctgcgatgtctggtacttattggcaaggacgaggctttgcttggg
cggtgggcggaagcgatactggtggataatgcagcacacctaatcgaagctgggtcagat
cccacgtggacaatttctttacgcaaagtatcggtactcctactgcatgccgtatcagac
agcccactatcttctgccgcagatgcacaacttcgggtcatcgaagctcttctatcgccg
cagtcatcgtcgaagctctcgagcgcacagatggagctgctctcgtatctcctaaaccat
gggtattatagcctgcttggccgtgcaatatcccgcgtccccgcgcagtccaagtcaata
cccagcctaccaacgctggtatcactttccgtcttgccctttacactccttgaccctgcg
tccccccagttcatgctcgccgtcattcacttcttttcaggcgtgctcactgtccccctc
ttgccgaaccgcctcccgcttctctctcttacttttctcgcgccgcgtattcctctacag
catctcaccgtagacatagttccgcgcgtgcttgctttcatcacttcagacgatgcgcgc
gtccaacttctggcaaatctgactgcattcgctccgccacggtacaatgctctccccgca
cctgcggtcgcgacttacttgcgcctcactgcggaaacaatgatggtattgccgattcat
gcacttgagccgccggaacgtaatactccacgaagcaacgcttgggccggagatgacgag
gaatcggacgaaggagagtctagtacacacgtcgaggtcgtatcgattttcactgcgccg
tctcggccgttgcctaccctcgacagcaagacgcgcatgagattacaaacactgccatcc
cccgcccacttgaactcgcttgtgtccgtagcatacaagcatactggcaacacgagcagg
gaggcattggtgaagtggttgcaggccctctcgacgatctggcccagccgtcgagatcgg
attgccggcgtcgttgttgcgtggagcggcggcgggctcgttagggaggtgtatcgaggg
tatgtcagacgcaaccctttcggaaccgcgggaaacgttgctgcgttgacagacccagct
cacgctgcacactggccgccgcttctctttcttgtcgacctctacaatcaagcactgctc
acaatgggtgacgacgagttcttttcgtcctctccaactacactttcttctgccacgctg
gctgccagcacagcgacgaccaccattactgcgcggaatccgctcacgctagatgaaatc
gcatcgttcagcaagcagttgctcagtatcgtgtttgtgctgtattggagagaagaccag
acgaacgtgagcgaagcaactgtcccaggcataccgaacttaagcctggaaaatgtgaga
gagcgtatgacgaagctactgcaagcgatacacgcgagagactcgcgacgtccgtttacg
ccgccagaccactggcttatgacctcgcaagttgacattggccctttcgtcgatgctgcc
atctacgaagaatcgcaaatgtcgcacgatactaccggcaccgcaccgcgtaacctttct
aagcgccagatcgcccttctgtctccccgtctcggcgtgctcaacaacatccccttcgcg
atcccgttcgatgtgcgtgtgagcatttttcggagtttcgtacaaaacgacgctgctgct
cgtggatacaatttgcggagccggcacgctgggtttaacccgcccgtccgggttactgtg
cgtaggggcaacattgcacaggacgggttcaatcgtttgggtgatgtggacctcaaggga
ccaattgcgatcaccttcatcgaccagtttgggcaggaagaggcaggcatcgacggtggt
ggagtctttaaagagttcctcaccgaactatgtaaggaggtgttcgacaccgatcgtggg
ctgtggcttgcgagcaagaagaacgagctgtatcccaacccgcattcgtatgcgaccgaa
tcgggaagcctggcgtggtaccggttcatcgggcgcatactcggcaaggcactctacgag
ggcatcctggttgacgtcgcgttcgcgggattcttcttagcgaagtggctaggcaaacaa
agcttcttggatgaccttgcatcgctcgacccggaactctatcaaggcctcatcttcctc
aagcattacaccggcaacccagaagacctctcgctcacgtttgccgttactagcgaagaa
tttgatgtaaccagaacgatcccgctcatcccgaatggcgaccagataccagtgacacgc
gaaaaccgtctgcaatacatctacctcatttcacactaccggctgaataagcagattaag
cgccagagcgacgcgtttttcgagggcttgtcggagatgattgatcccaagtggttgcgg
atgtttaatcagcaagagttgcaaattctccttggcggcgttaactcgccgattgatcta
gacgatctgcgcacaaatacacagtatggcgggctcttcaacgaccacgagtcaacaatc
gaaatgttctggcgtgtcgtaaacacttttaatcaggaccagcgacgtgcgcttctccgc
tttgcaacgagctgcagtcgaccgccgttgctaggtttcaaggagcttgtgcccaacttt
gccgtacgtgacgcaggctcagacgagaatagattaccgacagcaagcacctgtgtgaac
ctactcaagttaccgcgatacacgagcgaaaggatgctacgggagaagctcttgcaggcg
atacagtcgaacgccggattcgatctatcgtga
DBGET
integrated database retrieval system
