Phanerochaete carnosa: PHACADRAFT_261316
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Entry
PHACADRAFT_261316 CDS
T03128
Name
(RefSeq) hypothetical protein
KO
K12572
PAB-dependent poly(A)-specific ribonuclease subunit 3
Organism
pco
Phanerochaete carnosa
Pathway
pco03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pco00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
PHACADRAFT_261316
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pco03019
]
PHACADRAFT_261316
Messenger RNA biogenesis [BR:
pco03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
PHACADRAFT_261316
mRNA degradation factors
3'-5' decay
Pan complex
PHACADRAFT_261316
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Pan3_PK
Pkinase
PK_Tyr_Ser-Thr
Motif
Other DBs
NCBI-GeneID:
18917957
NCBI-ProteinID:
XP_007399054
JGI:
Phaca1_261316
UniProt:
K5W0U0
LinkDB
All DBs
Position
Unknown
AA seq
626 aa
AA seq
DB search
MSFFSRPSSSAVKIVAPSSSHSEPSSPKFARKDSTQRQCRNIMIYGSCKFQDKGCIYYHP
PLDSSSPVPPDSPTPSAALPAQAVNAPVFVPKNPASPVPAPAVPSSHIGPIFALSTGSSE
YHYDESGAYDSQAQQSDMSANPEGVANLAEHFQALDPSMNMNPYDQVGDMHLMDYDGAMD
PFYSTEGAFAHQPLDYHLYTHSRPEALQQRYFISDNVREELQRRSEATYAAPPPGLNLPE
ETQGYHSLMPLESTIGERRKFGNWYSTVYKALNSQDGIAYVLRRIENYRLNSQAAFSSIE
SWSRLKHPNVISVKEAFTTRAFNDNSLVVVYEYHPTAETVFDAHIKTKAPQFQNGRLQAQ
TSRIAERTLWSYIVQIAGAIKTVHDAGLAVRVVDPTKILVTGNNRVRVSSCGIVDVLMFE
ARQDIAMLQQEDLVMFGRLILSLCCNNLGAVNNLQKSLENVGRNYPQEIRNIIVYLMQKP
SPLKTIRQVFDMMKPQMLQEFDESLNAVDQLESDLMSELENGRIVRLLCKFGFIDERPEF
ARDPRWSETGDRYIVKLFRDYVFHQVDQNGQPVVNISHVLTCLNKLDAGVDERIMLVSRD
EQSCLVVSYREIKLCMESAFSELSGR
NT seq
1881 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtttttctcaaggccatcctcttctgctgtaaagatagtcgccccttcctcctca
cattcagagccttcgagcccgaaattcgccaggaaggacagcacacagagacaatgtaga
aatatcatgatatatggatcgtgtaaatttcaggacaaaggctgtatctactaccatcct
cctctcgactcttcatcccctgtacccccggattcaccaaccccgagtgccgcgctgccc
gcacaagcggtaaatgcacctgtgttcgtaccaaagaaccccgccagcccagtccccgct
cccgctgtaccaagtagccatattgggccaattttcgcattatcaacaggttcatccgaa
tatcactacgacgagtcaggagcctatgactctcaagctcagcagtctgatatgagtgcc
aacccggaaggcgtagctaatttggcagaacattttcaggcactcgatccctcaatgaat
atgaatccgtatgaccaagtgggggacatgcatctcatggactacgatggcgcaatggac
cctttctattcaaccgaaggcgccttcgcgcatcagccattggactatcacctgtataca
cattctcgaccggaggcgttgcagcagcgctatttcatctctgataatgtccgcgaagag
ctccaaagacggtcagaggcgacctatgcagctcctcccccggggctaaatttaccagag
gagacacaaggctatcactcgctgatgcccctcgagtccacgatcggtgaacgacgcaag
tttgggaattggtactccactgtatacaaggcacttaactctcaagatggcatcgcatac
gtactgcggcgaatcgagaactatcgactgaatagccaggccgcgttttctagcattgag
tcttggtctcgtctcaagcacccgaatgtgatctcagttaaggaagcctttaccacacga
gcgtttaacgacaattctctcgttgtcgtgtatgagtatcaccccaccgctgagactgtg
ttcgacgcgcatatcaagacgaaggctcctcagtttcagaacggccgacttcaagcgcaa
actagtcgcatagcagagcgtaccctctggtcgtatatcgtccagattgccggtgcgatc
aagaccgtccatgatgccgggctcgctgttcgcgtcgtcgatcctaccaagatcttggtc
actggtaacaatagggtccgtgtcagttcgtgtggcatcgtagacgtcctcatgtttgag
gctcggcaagacatcgcgatgttgcagcaggaagacttagtgatgtttggcaggctgatt
ctcagtctatgttgtaacaatcttggagccgtcaataacctgcaaaaatctttggagaac
gttggccggaattatccgcaggagatcaggaacatcattgtgtatctcatgcagaagccg
agccccttgaagaccatccgccaggtgttcgatatgatgaagcctcagatgctgcaagag
ttcgatgagtctctgaatgctgtcgaccaactcgaaagcgatttaatgagcgagctcgag
aatggccgtatagtgcgccttctttgtaaattcggtttcatcgacgaacggcccgaattc
gcgcgagaccctcggtggtcggaaactggtgaccgatatattgttaagctgttccgtgac
tatgtcttccaccaggtcgaccagaacggtcagccagtcgtcaatatttctcacgttctg
acgtgtcttaacaagctggatgccggcgttgatgagcgcatcatgcttgtttctcgtgat
gagcagagctgtctcgttgtcagttatcgtgagatcaagttatgcatggagtctgctttc
agcgagttgtctggtcggtag
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