Phanerochaete carnosa: PHACADRAFT_261348
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Entry
PHACADRAFT_261348 CDS
T03128
Name
(RefSeq) hypothetical protein
KO
K14570
RNA exonuclease [EC:3.1.-.-]
Organism
pco
Phanerochaete carnosa
Pathway
pco03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
pco00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
PHACADRAFT_261348
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pco03009
]
PHACADRAFT_261348
Ribosome biogenesis [BR:
pco03009
]
Eukaryotic type
Pre-60S particles
RNases
PHACADRAFT_261348
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_T
Motif
Other DBs
NCBI-GeneID:
18917965
NCBI-ProteinID:
XP_007399077
JGI:
Phaca1_261348
UniProt:
K5US64
LinkDB
All DBs
Position
Unknown
AA seq
629 aa
AA seq
DB search
MKRSQESPAPAAPSSLPPASKKLKVSPRESRGISTQDPQDVTGSSEDGWTKVEKRKAKKM
KKVEGKFDASPPKFMYNKGELLKRREAIGISDIRDLVLHLAADAPPPGWVRVENPRSVQK
VVALLIPGLTPDLLSLPPLPTSATSNPHLPLEIPLPRTDGPSTGVPFIAKTFSHACPTQA
PGDQTRMHSVLSEFFQAPVSGEEKKRRILERVSSERSQEKSPLRYLLTTEQMLENDYPVP
SYIAETFEKTEGWVETPKPSEESLTNKSLRIFAIDCEMCQTEDGKELARVCIIDYASGVV
IYDKLVKPQKPVTDYLTRWSGITEEALRNVTTTFREVQSHVLALLSVSPTPVLLGHSLES
DLKALKICHPRCIDTAVTYHHPRGRPLKPGLAWLTKKWCGREIQNRGEGGHDPEEDARAC
LDLLKKKADNGPGFGEFKVDFESIFERMSRARNGAVSSIVVDHGSPANWHGSKATTTIAC
KTDSEVLQGLLGAIPSHTFSFSRFTALADARGWITNRSNADTTVEAAPATPAPAPDLSGI
LATLDSQLKELYDSLPSRTAVIIFTGHSDPRHMAELNARKSAFETAIRSGKNPEELGDIK
WTSADGRALEEEVGKAKRGLLFLGIKDPK
NT seq
1890 nt
NT seq
+upstream
nt +downstream
nt
atgaagcggtcgcaggaatccccggcgccggctgcgccctcgagtttgcctccagcctcg
aaaaagctgaaggtatcaccacgtgaatcgcgtggtattagcactcaagacccacaagac
gtcacaggaagctccgaggacggatggacgaaggtcgagaagcgaaaggcgaaaaagatg
aagaaggttgaaggaaaatttgacgcgagcccgccaaagtttatgtacaacaagggtgaa
cttctgaagcggcgtgaagcaatcggaatatcagatattcgagatttggttctacatctt
gctgcagacgcgccgccgccaggctgggtgcgcgtagagaatcctcgttctgttcaaaaa
gttgtcgctctcctaatacctggtctgacgccggaccttctgtctctcccgcccctccct
acatccgcaacttcgaatccccacttacctcttgagatacccttgccaagaacagatgga
ccatcaacaggcgtaccgtttatagcgaagaccttcagccacgcctgtccaacccaagct
ccgggagatcagacgaggatgcactctgtgctcagtgaattcttccaggccccggtctct
ggtgaggagaagaagcgaaggatactggagagagtttcttcagagcgttcgcaagaaaag
tcgccattgcgatatctgctaacgaccgagcaaatgctggagaacgactatcccgtcccc
tcgtatatcgcggagacattcgagaagacggaaggttgggtcgagacacccaagccatcg
gaagagtctttgactaacaagtcgctccgcatatttgcgatagattgtgagatgtgtcaa
acggaggatggcaaggaattggctcgcgtctgtatcatcgactatgcctcaggtgtggtc
atctatgacaagctcgtgaaaccgcagaagccagttacggactacctcacaaggtggtca
ggtatcacggaagaagcacttcgaaacgtcactacgacattcagggaagtacaatctcac
gtgcttgccttactctccgtctctccaacaccggtgctcctcggccactcgctcgagtcc
gacctgaaggctctcaaaatctgccatccacggtgcattgacacggcggtgacgtatcac
catccgcgcggcaggccgctcaagcctggtcttgcatggctgacgaagaagtggtgcggg
cgtgagatccagaatcgcggagagggtgggcacgaccctgaggaagacgcgagggcgtgt
ctggacttgttgaagaagaaagctgacaatggtcctggattcggcgagttcaaggtcgat
ttcgaatcgatattcgagcgtatgtcgcgggcacgaaacggtgctgtgtcgtcaatcgtc
gtcgatcatggaagcccagcaaactggcatggctcgaaggcgactacaactatcgcttgt
aaaaccgatagcgaggtgctgcaaggtcttctgggcgcgataccctcgcatacgttctcg
ttcagccgcttcactgcgctagcagacgctcgtggctggatcacaaataggtcgaatgct
gacactactgtcgaggctgcacctgccactcccgctcctgccccagacctctctggcatc
ctcgcgacattagactcgcagctcaaggagctctacgattctctgccgtcgcgcactgcg
gtgatcatttttaccggacactcggatcccaggcacatggccgaacttaacgcgcgtaag
tctgcgttcgagacagcaatccgttcggggaagaatccggaggagcttggtgacatcaag
tggacgagcgcggatggacgggcgttggaagaggaggtggggaaggcgaagaggggactg
ctattcctcggcatcaaagatccgaaatag
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