KEGG   Phanerochaete carnosa: PHACADRAFT_26227
Entry
PHACADRAFT_26227  CDS       T03128                                 
Name
(RefSeq) hypothetical protein
  KO
K13171  serine/arginine repetitive matrix protein 1
Organism
pco  Phanerochaete carnosa
Pathway
pco03013  Nucleocytoplasmic transport
pco03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:pco00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    PHACADRAFT_26227
   03015 mRNA surveillance pathway
    PHACADRAFT_26227
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pco03019]
    PHACADRAFT_26227
   03041 Spliceosome [BR:pco03041]
    PHACADRAFT_26227
Messenger RNA biogenesis [BR:pco03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    EJC complex
     PHACADRAFT_26227
Spliceosome [BR:pco03041]
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   SR-related proteins
    PHACADRAFT_26227
SSDB
Motif
Pfam: PWI
Other DBs
NCBI-GeneID: 18918234
NCBI-ProteinID: XP_007392708
JGI: Phaca1_26227
UniProt: K5W141
LinkDB
Position
Unknown
AA seq 452 aa
MADAGFFKGTSADQDRRFSDKELKLLKTGKFPPEFDKKVDMRKVNMTVLRPWLVSKIVEL
LGFEDELLVEYAFGLLEDSNPDPRKMQINLTGFLAKDAATFMTDLWKLLLEAQESEAGVP
RSMVEAKKEEMRRVRETDTRALEERDRRSRLDEIRANDSGRGRGRGRGRGRGRGGFDDRA
PRGRDGGWGARGGTRPPPRRHSPSRSPRRRSRSSTHSASSSRSPGPARRYRSRSPPPHRS
LSRTPPRRDRPRESRSPPPRRRLSPMHSRSPVHRRRRSPSYSPRDRRPRSPPPRRRRPSP
SHSRSSRSRSPPYRGYGRRRSFNRSRSPPRRRRRMSPSFSRSPPRRTGGPERRRGGPSRS
RSSERSRTMSDGPRRADNQKMDVERNSPELKIRGQAEAEKRKGKWDEQDKDEVRYIMLVQ
VKTLFNAVTKAHGRPRGAEETRKRAEREGAAQ
NT seq 1359 nt   +upstreamnt  +downstreamnt
atggccgacgctgggtttttcaagggcacgtctgctgatcaggatcgccggttctctgac
aaggagctcaaacttctcaagactgggaagtttcctcccgaatttgacaaaaaagttgac
atgcgcaaagttaacatgacagtgcttcgaccatggcttgtcagcaagatcgtcgagctg
ctgggctttgaggatgagctgttggtcgaatacgccttcgggttgctcgaggattctaac
cctgaccccagaaaaatgcaaataaaccttaccggctttttggccaaagatgcggcgaca
ttcatgacagacctgtggaagctcctgcttgaagcacaagaatccgaggctggtgtgcca
aggtctatggttgaagcaaagaaggaggaaatgcgccgagtgagggaaactgacactcgc
gcgctcgaggaaagggaccgacggtcgcgccttgacgagatacgtgccaatgactctggg
cggggccgcggacgtggcagaggcagaggtcgcggtagaggtggctttgatgacagagca
ccgcgaggcagagacggtggctggggtgcccgcggtggtacacgcccaccccctcgtcga
cattctccatctcgctcgccacggagaagatcgagaagctctactcatagcgcatctagc
tcacgatcccctggtcccgcccgccgatatcgctcacgttcgcccccgccacaccgttca
ttgtcgcgcactcctccacgccgagaccgcccccgtgaatctcgttcgcctccacctcgg
cgcaggctctctcctatgcattcccgctctcctgttcatcgtaggcgccgctcaccctcg
tattctccccgtgacagacgtccgcgcagcccacccccgcgtcgtagacgcccatcgccc
agtcattctcgatcttctcgttcgcggtctccaccctaccgcggatacggtcgacgcaga
agcttcaaccgtagccgctcgccaccaagacggagacgtaggatgagtccgagtttcagt
cgcagccctcctcgacgaacagggggaccagagaggaggcgaggcggtcccagccgtagc
aggagtagcgagcgtagtaggaccatgagtgacgggccccgacgcgcagacaaccaaaag
atggacgtggaacgcaacagccctgaactgaagattcggggtcaagcagaagctgagaag
cggaagggcaaatgggacgaacaggataaggatgaagtacgttacatcatgctcgttcag
gttaaaactttatttaatgccgtcaccaaagcccacggaagacccagaggagctgaagaa
acgagaaagcgagctgaaagagagggcgctgcgcaataa

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