Phanerochaete carnosa: PHACADRAFT_26227
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Entry
PHACADRAFT_26227 CDS
T03128
Name
(RefSeq) hypothetical protein
KO
K13171
serine/arginine repetitive matrix protein 1
Organism
pco
Phanerochaete carnosa
Pathway
pco03013
Nucleocytoplasmic transport
pco03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
pco00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
PHACADRAFT_26227
03015 mRNA surveillance pathway
PHACADRAFT_26227
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pco03019
]
PHACADRAFT_26227
03041 Spliceosome [BR:
pco03041
]
PHACADRAFT_26227
Messenger RNA biogenesis [BR:
pco03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
PHACADRAFT_26227
Spliceosome [BR:
pco03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
SR-related proteins
PHACADRAFT_26227
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PWI
Motif
Other DBs
NCBI-GeneID:
18918234
NCBI-ProteinID:
XP_007392708
JGI:
Phaca1_26227
UniProt:
K5W141
LinkDB
All DBs
Position
Unknown
AA seq
452 aa
AA seq
DB search
MADAGFFKGTSADQDRRFSDKELKLLKTGKFPPEFDKKVDMRKVNMTVLRPWLVSKIVEL
LGFEDELLVEYAFGLLEDSNPDPRKMQINLTGFLAKDAATFMTDLWKLLLEAQESEAGVP
RSMVEAKKEEMRRVRETDTRALEERDRRSRLDEIRANDSGRGRGRGRGRGRGRGGFDDRA
PRGRDGGWGARGGTRPPPRRHSPSRSPRRRSRSSTHSASSSRSPGPARRYRSRSPPPHRS
LSRTPPRRDRPRESRSPPPRRRLSPMHSRSPVHRRRRSPSYSPRDRRPRSPPPRRRRPSP
SHSRSSRSRSPPYRGYGRRRSFNRSRSPPRRRRRMSPSFSRSPPRRTGGPERRRGGPSRS
RSSERSRTMSDGPRRADNQKMDVERNSPELKIRGQAEAEKRKGKWDEQDKDEVRYIMLVQ
VKTLFNAVTKAHGRPRGAEETRKRAEREGAAQ
NT seq
1359 nt
NT seq
+upstream
nt +downstream
nt
atggccgacgctgggtttttcaagggcacgtctgctgatcaggatcgccggttctctgac
aaggagctcaaacttctcaagactgggaagtttcctcccgaatttgacaaaaaagttgac
atgcgcaaagttaacatgacagtgcttcgaccatggcttgtcagcaagatcgtcgagctg
ctgggctttgaggatgagctgttggtcgaatacgccttcgggttgctcgaggattctaac
cctgaccccagaaaaatgcaaataaaccttaccggctttttggccaaagatgcggcgaca
ttcatgacagacctgtggaagctcctgcttgaagcacaagaatccgaggctggtgtgcca
aggtctatggttgaagcaaagaaggaggaaatgcgccgagtgagggaaactgacactcgc
gcgctcgaggaaagggaccgacggtcgcgccttgacgagatacgtgccaatgactctggg
cggggccgcggacgtggcagaggcagaggtcgcggtagaggtggctttgatgacagagca
ccgcgaggcagagacggtggctggggtgcccgcggtggtacacgcccaccccctcgtcga
cattctccatctcgctcgccacggagaagatcgagaagctctactcatagcgcatctagc
tcacgatcccctggtcccgcccgccgatatcgctcacgttcgcccccgccacaccgttca
ttgtcgcgcactcctccacgccgagaccgcccccgtgaatctcgttcgcctccacctcgg
cgcaggctctctcctatgcattcccgctctcctgttcatcgtaggcgccgctcaccctcg
tattctccccgtgacagacgtccgcgcagcccacccccgcgtcgtagacgcccatcgccc
agtcattctcgatcttctcgttcgcggtctccaccctaccgcggatacggtcgacgcaga
agcttcaaccgtagccgctcgccaccaagacggagacgtaggatgagtccgagtttcagt
cgcagccctcctcgacgaacagggggaccagagaggaggcgaggcggtcccagccgtagc
aggagtagcgagcgtagtaggaccatgagtgacgggccccgacgcgcagacaaccaaaag
atggacgtggaacgcaacagccctgaactgaagattcggggtcaagcagaagctgagaag
cggaagggcaaatgggacgaacaggataaggatgaagtacgttacatcatgctcgttcag
gttaaaactttatttaatgccgtcaccaaagcccacggaagacccagaggagctgaagaa
acgagaaagcgagctgaaagagagggcgctgcgcaataa
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