Phanerochaete carnosa: PHACADRAFT_262344
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Entry
PHACADRAFT_262344 CDS
T03128
Name
(RefSeq) hypothetical protein
KO
K12856
pre-mRNA-processing factor 8
Organism
pco
Phanerochaete carnosa
Pathway
pco03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pco00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
PHACADRAFT_262344
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pco03041
]
PHACADRAFT_262344
Spliceosome [BR:
pco03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
PHACADRAFT_262344
Complex C
U5 SnRNP specific factors
PHACADRAFT_262344
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PROCN
PRP8_domainIV
U6-snRNA_bdg
PRO8NT
U5_2-snRNA_bdg
RRM_4
PROCT
Motif
Other DBs
NCBI-GeneID:
18918256
NCBI-ProteinID:
XP_007399722
JGI:
Phaca1_262344
UniProt:
K5VYN8
LinkDB
All DBs
Position
Unknown
AA seq
2353 aa
AA seq
DB search
MPLPPPGMPVAPPPGMPPPSLAQASGSRMPPEVLAQKSQKWIQMQKKRYGEKRKGGFVDM
GKQDLPPEHVRKIIKDHGDMSNRKFRNDKRVHLGALKYVPHAVMKLLENIPFPWEQVREV
PVLYHITGAITFVNEVPRVIEPVYHAQWSSMWLAMRREKRDRRHFKRMRFPPFDDEEPPL
DYGDNVLDVEPLESIQLDLDEEEDAAIVDWFYDPKPLVGDKTAVNGLSYRYWSLSLPVMA
NLYRIGRTLLSDHTDQNSSYLFDKKSFFTAKALNLAIPGGPKFEPLYRDMDTFDEDWNEF
NDINKVIIRQQIRTEYKVAFPHLYNSLPRSVRISPYHSPKNVYIRTDDPDLPAFYFDPLI
NPISLRGFQPKNAPLVSHEDRIFGPNGADDDDFELPDEFEPLLEDKPLENDLTADAIALW
WAPEPYSRRSGRMRRAQDIPLVKNWYLEHCPPGQPVKVRVSYQKLLKCYVLNELKSRPEK
AMTKKNLFRQLKATKFFQTTRLDWVEAGLQVCRQGYNMLNLLIHRKNLNYLHLDYNMNLK
PVKTLTTKERKKSRFGNAFHLCREILRLTKLVVDAHVQYRLGNVDAFQLADAIQYIFAHI
GALTGMYRYKYKLMRQVRMTKDLKHLIYYRFNTGPVGKGPGCGFWAPGWRVWLFFMRGIV
PLLERWLGNLLARQFEGRNSKGIAKTVTKQRVESHYDLELRAAVMHDILDMMPESIKQNK
SKTILQHLSEAWRCWKANIPWKVPGMPTAIENIILRYIKSKADWWVSVAHYNRERIRRGA
TVDKAVVKKNLGRLTRLYLKAEQERQHGYLKDGPYISAEEAVAIYTATVHWLESRKFSPI
PFPPLNYKHDTKLLVLALEKLKEAYSVKGRLNQSQREELALIEQAYDNPHECLSRIKRLL
LTQRAFKESGIEFFDTYDKLIPCYDIEPVEKITDAYLDQFLFFEADKRGLFPAWIKPADT
EPPPLLVYKWCQGINNLTDIWETSEGECNVMMETVLSKVYEKIDLTLLNRLLRLIMDHNL
ADYITAKNNTVLTYKDMAHTNAYGLIRGLQFSAFVFQYYGLVLDILILGLQRASEMAGPP
QVPNNFLQYRDVATETRHPIRLYSRYVDRIHILFRFSAEEARDLIQRYLSANPDPTNNNV
IGYNNKRCWPRDCRMRLIKHDVNLGRAVFWNVKQSLPRSLTTIEWEDTFVSVYSKNNPQL
LFSMCGFEVRILPKIRTVNGEQYSLKDSVWNLTNEQTKERTAQAFLRVSDEGVQQFNNRI
RQVLMSSGSTTFSKIVNKWNTALIGLMTYYREAVIHTNELLDSLVKAENKIQTRVKIGLN
SKMPSRFPPVVFYTPKELGGLGMLSMGHVLIPQSDLRWSKQTDVGVTHFRAGMSHEEDQL
IPNLYRYLQPWEAEFLDSARVWSEYSMKRKEANAQNRRLTLEDLEDSWDRGIPRINTLFQ
KDRHTLAYDRGWRVRTDWKQYQLLKHNPFWWTSQRHDGKLWQLNNYRVDVIAALGGVEGI
LEHTLFKGTYFPTWEGLFWEKASGFEESMRYKKLTNAQRSGLNQIPNRRFTLWWSPTINR
ANVYVGFQVQLDLTGIFMHGKIPTLKISLIQIFRAHLWQKIHESVVMDLCQVFDQELEPL
QIETVQKETIHPRKSYKMNSSCADILLFSAYKWNISRPSLVTDSKDVLDGTTSNKFWVDV
QLRWGDFDTHDIERYTRAKFLDYISDSMSIYPSPTGVMIGMDLAYNLWSAYGNWFPGLKP
LVQQAMAKIMKANPACHVLRERIRKGLQLYSSEPTEPYLNSQNYSELFSNQIIWFVDDTN
VYRVTIHKTFEGNLTTKPINGAIFIFNPRSGQLFLKIIHTSVWAGQKRLGQLAKWKTAEE
VAALVRSLPVEEQPKQVIVTRKGMLDPLEVHLLDFPNIVIKGSELQLPFQACMKMEKFGD
LILRATQPQMVLFNLYDDWLKSISSYTAFSRLILLLRGLHVNQEKAKLVLRPDKNTITEP
HFVWPSLGDEEWIKVEVALKDLILADFGKRNSVNIASLTASEIRDIILGQEIAAPSVQRQ
QMAELEKSNEAQGQVTAVQTQTTNIHGDTIQTVTTTNYEQQVFSSKSDWRVRAISATHLP
LRLQHIYVSNDDVKDDASSHTFVLPKNILRHFVTAADLRTQVAAYLYGVSPPDNKQVKEV
KAVVWVPQRGNNNNVELPSQMPRDDFLLKDLEPLGWIKTQALELNHLSPTDITTHAKLMA
DHPEWGPSSICLTVAFTPGSVSLSAHSLTVAGFEWGRKNTDTSPNPSGFNPNMSERIQLL
LSDRILGMTLVPEGRIWNYGIGLTQLWSPTISYSVALDTPLLFWAEEHRPAAFLSFANLE
AGDDSADVENNFA
NT seq
7062 nt
NT seq
+upstream
nt +downstream
nt
atgccgcttccgccaccaggcatgccagtggcgccgccccccggtatgccgcctccgagc
cttgctcaggcgtccggctcgcgtatgcctccggaagtgctggcacaaaaatcccagaag
tggatccagatgcagaagaagcggtatggggagaagcgcaagggtggctttgtggacatg
ggcaagcaggacctgccgccggagcacgtccgcaagatcatcaaggaccacggtgacatg
agcaaccgcaagttccggaacgacaagcgagtgcatctcggtgccctcaagtacgtccca
cacgcggttatgaagttgctcgaaaatatccccttcccttgggagcaggtccgcgaggtg
cccgtgttgtaccacataacgggcgcaattaccttcgtcaacgaggttcctcgcgtcatc
gaacccgtttatcatgctcagtggagttccatgtggcttgctatgcggcgagagaagcgc
gatcgacgacacttcaagcgtatgcgcttcccgccctttgatgacgaagaaccgcccctc
gactacggcgacaatgtcctggacgtggagccgctggaatcaattcagctggatctcgac
gaagaggaagacgccgctatcgtcgactggttctacgacccgaagcctctagttggcgac
aagactgctgtgaacggtctgtcgtacagatactggtcgctctccctgccggtaatggcg
aacttgtatcgcattgggcgcactctcctgtccgaccacaccgaccagaactccagttac
ctgttcgacaagaagtcgtttttcaccgccaaggcgctgaatttggccatccccggtggt
ccgaagttcgagcccctgtacagggacatggacacgtttgacgaagactggaacgagttc
aacgatatcaacaaagtcatcattcgccagcagatccgaacggagtacaaagtagccttc
ccgcacctatacaactcgcttcctcgttccgttcgcatctctccttaccactccccgaag
aacgtgtacattcgcaccgacgatcccgacctgcctgccttctactttgacccgctcatt
aacccgatatctttgcggggtttccagccgaaaaacgcgccccttgtctcgcacgaagat
cgtatctttggtcctaatggcgcggacgacgacgacttcgagctcccagacgaatttgag
cctttgcttgaagacaagccgctggagaacgatttgactgctgatgcgattgctctctgg
tgggcgcctgagccgtacagccgtcgttccggtcgcatgcgtcgtgcacaagacatccct
cttgtcaagaactggtaccttgaacactgcccacctggtcagcctgtcaaggtccgggtg
tcgtaccagaagctgctcaaatgctacgtactgaacgagctgaagtcgcggccagaaaag
gcgatgacgaagaagaacttgttccgccagctcaaagcaaccaagttcttccagacgaca
cgactggattgggtcgaggctggtctgcaggtctgccggcaggggtacaacatgctcaac
ctgcttattcaccggaagaacctcaactacctccacctcgactataacatgaacttgaag
cccgtcaagacgctgacgacgaaggagcgcaagaagtcgcgattcggaaacgccttccat
ttgtgtcgtgagattcttcgtctcaccaagcttgtcgtcgacgcgcatgtccagtaccgt
cttggtaacgtcgatgcgttccagcttgcggacgccattcagtacatcttcgcccatatc
ggtgcactgactggcatgtaccggtataagtacaagctcatgagacaagttcgtatgaca
aaggacctgaagcacttgatctactaccgtttcaacaccggcccagtcggaaaaggtccc
ggatgcggtttctgggctccaggttggcgagtatggctcttcttcatgcgtggtatcgtt
cccctcctcgagcgctggctcggcaacctgctcgctcgtcagttcgaaggtcgtaactcg
aagggcatcgcgaagacggtcacgaagcagcgcgttgaatcgcactacgacttggagctc
cgtgccgcggtcatgcacgatatcctcgacatgatgcccgagtcgatcaagcagaacaag
tcgaagacgatcttgcagcacctgtcggaggcgtggcgttgctggaaggcaaatatccct
tggaaagtgcccggtatgccgacggctatcgagaacatcatccttcggtacattaagagc
aaggccgactggtgggtctccgtcgcgcactacaaccgtgagcgtatccgtcgcggtgct
actgttgacaaggcagtcgtgaagaagaacctgggccgtctcactcgtctctacctcaag
gctgagcaggagcgtcagcatggttacctcaaagatggtccgtacatcagtgctgaggaa
gccgtcgcgatctacacagcgaccgttcactggctcgagtcgcggaagttctcccccatt
cctttccctccgctgaactacaagcacgacacgaagctcctggttcttgcgctcgagaag
ctgaaggaggcgtactccgtcaagggccgcctgaaccagtctcagcgtgaggagctggcg
ttgattgagcaagcgtacgacaacccgcacgagtgtttgtctcgaatcaagcgtctgctc
ctgacccaacgtgcgttcaaggagtccggtatcgagttcttcgacacctacgacaagctc
atcccatgctacgatatcgagcccgtcgagaagatcaccgatgcgtaccttgaccagttc
ctgttcttcgaggccgacaagcgcggtctcttccccgcttggatcaagcctgctgacaca
gagcctccgccgctgctcgtgtacaaatggtgccagggcatcaacaatttgacggacatc
tgggagacgagcgagggcgagtgcaacgtcatgatggagacggttctatccaaggtctac
gagaagatcgaccttacactgctcaaccgtctcctgcggttgatcatggaccataacttg
gccgactacatcacggcgaagaataataccgttctgacgtacaaggatatggcgcacact
aatgcgtacggcctcattcgcggcctccagttctctgctttcgtcttccagtactacggc
ctcgtcctggatatccttattctcggccttcagcgcgccagtgagatggcaggcccgcca
caggtgcccaacaatttcctgcagtaccgcgatgttgcgacagagactcgtcatccaatt
cgtctgtactcccgctatgtcgaccgcattcatatcctcttccgcttcagtgctgaggag
gcgcgtgatctcatccaacgctacctgagcgcaaaccctgacccgacgaacaacaacgtt
atcggctacaataacaaacgttgctggccacgcgactgccggatgcgtctcatcaaacac
gacgtcaacctcggacgtgcggtcttctggaacgtcaagcagagcttgccgcgctcgctc
acaaccatcgaatgggaagacactttcgtcagcgtttactcgaagaacaacccccagctt
ctcttctcgatgtgcggctttgaggtccgtatcctgccgaagattcggacggtcaacggc
gagcagtactcgctcaaggattccgtgtggaaccttacgaacgaacagacgaaggagcgc
acggcacaggcgttcttgcgagtgtccgatgagggcgtccagcagttcaacaatcgcatc
cgtcaggttctcatgagctctggctcgacaacgttctccaagatcgtcaacaagtggaac
acggcgctcattggtctcatgacgtactatcgcgaagccgtcatccacacgaacgagcta
ctcgattccctggtcaaggcggagaacaagatccagacgcgtgttaagatcggtctcaac
agtaagatgccgtcgcgtttcccgcccgtcgtcttctacacacccaaggagttgggcggt
ctcggcatgttgtcgatgggtcacgtcctcatcccgcagagtgatctccgatggtcgaag
cagaccgacgtcggtgttacccacttccgcgctggcatgtcgcacgaagaggaccagttg
attccgaacttgtatcgctaccttcagccctgggaggccgaattcctggactccgctcgt
gtgtggtctgaatattcgatgaagaggaaggaggcgaacgcgcaaaaccgacgtctgacc
cttgaggatctcgaagatagctgggatcgtggtatcccccgtatcaacactctgttccag
aaggatcgtcacaccctcgcgtacgaccgtggttggcgtgtgcgcacggattggaagcag
taccagctgcttaagcacaacccgttctggtggacatcgcagcgccacgacggcaagctc
tggcagctcaacaactaccgtgtcgacgtcattgctgcgctcggtggtgttgagggtatt
ctcgaacacacgttgttcaagggcacctacttcccgacctgggagggtctcttctgggag
aaagcgtccggcttcgaagagtccatgcgttacaagaagctcacaaatgcccagcggtcc
ggtctcaaccagatcccgaaccgtcgcttcaccctatggtggagcccgaccatcaaccgc
gccaacgtctacgtcggtttccaggtccagcttgatctaacaggtatcttcatgcatggt
aaaatcccgactctcaagatcagtttgatccagatcttccgtgcacatctgtggcagaag
attcatgagagtgtcgtcatggatctgtgtcaggtgttcgatcaggagcttgagcccttg
cagattgagactgtccagaaggagaccatccacccgcgtaaaagttacaagatgaactcg
tcatgcgctgatatcttactcttctcggcctataagtggaacatctctcgcccttcgctt
gttacggatagcaaggatgtcctcgacggcaccaccagcaacaagttctgggtcgacgtc
cagcttcgttggggcgatttcgacactcacgacatcgagcggtacactcgcgcgaaattc
cttgactatatctccgactcgatgagtatctacccctcaccaactggtgtcatgatcggc
atggatctcgcatacaatctgtggtccgcgtacggcaattggttcccaggtctcaagccg
ctcgtccagcaagctatggccaagatcatgaaagccaatccggcatgccacgttcttcgt
gaacgtattcgcaagggtctccagctctactcgtctgaacccaccgagccatacctgaac
agtcagaactattccgagctgttctcgaatcaaatcatctggttcgtcgacgacaccaac
gtctaccgtgtcaccatccacaagacgtttgagggtaacttgacaaccaaaccaatcaac
ggcgctatcttcatcttcaacccgcgctctggacagcttttcctgaagatcattcacact
agtgtctgggccggacagaagcgtctcgggcagcttgccaagtggaagacggccgaagaa
gtcgctgcgttggtccgctcgctccccgtcgaagagcagccgaagcaggttatcgtcacc
cgaaagggtatgctggacccgcttgaggtccacttgcttgacttcccgaacattgtcatc
aagggttctgagctacagcttcccttccaagcctgcatgaagatggagaagttcggtgat
ctaatcttgcgtgcgacccagccgcagatggttctgttcaacttgtacgatgattggctc
aagtccatctcgagctacaccgctttctcgcgcctcattcttcttcttcgcggcctgcac
gtcaatcaggaaaaggcgaaacttgttttgcgcccggacaagaatacgataaccgagcct
cacttcgtctggccgtcgctcggcgatgaggagtggatcaaggtcgaggttgcgcttaag
gatctaatcctcgcggactttggcaaacgcaacagcgtcaacattgcctcacttactgcg
agcgaaatccgagacatcatccttggacaggagatcgccgccccctcggtgcagaggcaa
caaatggctgaactcgaaaagagcaacgaagctcagggacaggtgaccgcggtgcagacc
cagacgaccaacatccacggtgacaccatccagaccgttacgaccacaaactacgaacag
caggtgttcagcagcaaatctgactggcgagtgcgcgcgatatcggcaacacacctaccc
ctccgtctgcagcacatctacgtgtcgaatgatgacgttaaagacgacgcttcctctcac
accttcgtcctgccgaagaacatccttcgccacttcgtcacggctgcggaccttcgcacg
caggtcgcggcctacctctatggcgtgtcgccgcccgataacaagcaggtcaaggaggtc
aaggctgttgtctgggttcctcagcgcggaaacaacaataacgtggaactgccatcgcaa
atgccgcgcgacgacttcctgctcaaggatctcgagccgcttggatggatcaagacacag
gctctcgagctgaaccacctttcgccgacggacattacgacgcacgcgaagctaatggct
gaccatccggaatggggcccatcgtccatctgcctcaccgtggcgttcactcccggctcc
gtctcgctgtcggcgcactcgctgactgtcgctggattcgagtggggccgcaagaacact
gacacttctcccaacccgtctggctttaacccgaacatgtcagagcgtatccagctgctc
ttgtctgacaggatccttggaatgacgttggtgcccgaaggtcgtatctggaactatggt
atcggcctgacccagctctggtcaccaaccatcagttactcggtcgccctcgacacccct
ctgctgttctgggcagaggaacaccgtcctgctgcattcctctcgtttgccaacctcgaa
gccggtgatgacagcgcggacgttgaaaataatttcgcttag
DBGET
integrated database retrieval system
