Phanerochaete carnosa: PHACADRAFT_263678
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Entry
PHACADRAFT_263678 CDS
T03128
Name
(RefSeq) hypothetical protein
KO
K12606
CCR4-NOT transcription complex subunit 9
Organism
pco
Phanerochaete carnosa
Pathway
pco03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pco00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
PHACADRAFT_263678
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pco03019
]
PHACADRAFT_263678
Messenger RNA biogenesis [BR:
pco03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
PHACADRAFT_263678
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rcd1
TPR_IPO11
Motif
Other DBs
NCBI-GeneID:
18918621
NCBI-ProteinID:
XP_007400671
JGI:
Phaca1_263678
UniProt:
K5VUD5
LinkDB
All DBs
Position
Unknown
AA seq
329 aa
AA seq
DB search
MAGLVSPRPVSYNSYNPYARNVPPSYPESPASVGRMAIHTPGQSIGGYPGTSPAIPTVAH
EEQKVYGLVIDLLNPEKRESALLELSKKREQYDDLALVLWHSFGIMPALLQEIVSVYPLL
SPPNLTAHASNRVCNALALLQCVASHPETRQLFLNAHIPLFLYPFLNTTSKTRPFEYLRL
TSLGVIGALVKQNDNTSVIHFLLSTEIIPLCLRIMETGSELSKTVAIFIVQKILLDETGL
TYICHTYERFYAVGTVLSNMVNQLVETQAVRLLKHVVRCYLRLSDNLRAREALRACLPEP
LRDNTFASLLKGDMVTKRCLTTLLNNLNE
NT seq
990 nt
NT seq
+upstream
nt +downstream
nt
atggctggtcttgtgtccccacgtcctgtctcttacaacagctacaacccgtatgcccgt
aacgttcccccttcctatcccgaatctcccgccagtgtaggccgcatggccatccacaca
cctggccagagcatcgggggctaccctgggacttccccggcaattccgaccgtggcacat
gaagagcagaaagtctacggtcttgtcattgacctgctgaacccggagaagcgcgagagc
gcattgttggagctgagcaagaaaagagaacagtacgacgaccttgccctggttctctgg
cattcctttggtatcatgccagctctactacaggagattgtctccgtctatcctctactg
tcgccaccgaaccttaccgcgcacgcctctaaccgtgtctgcaacgcgcttgcgcttcta
caatgcgtagcgtctcaccccgagacccgccaactcttcttgaacgctcatatacccctc
ttcttatacccttttcttaatactacgtcgaagactcgaccatttgaataccttcgtctg
acctccttgggcgtaatcggggccttggttaagcaaaatgacaacacttccgtcatccat
ttcctgctctcgacggagataataccgctctgcctgcgcatcatggaaaccggctctgaa
ttatcaaagactgtcgctatcttcattgtacagaagatcctactagatgaaaccggcttg
acatatatctgccacacctacgagcggttctacgctgtcggtaccgtgctgagcaacatg
gttaaccaacttgtggagacgcaggctgtccgccttctcaaacacgttgtgcgctgctac
ctgcgactcagtgacaatctgagggcacgtgaggctctcagggcttgtctcccagaacct
ctgcgtgacaatacctttgcctcgctgctcaagggcgacatggtcacgaaacgttgcctc
acaacgctactgaacaatctcaatgaatag
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integrated database retrieval system
