Phanerochaete carnosa: PHACADRAFT_26411
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Entry
PHACADRAFT_26411 CDS
T03128
Name
(RefSeq) hypothetical protein
KO
K18715
nucleoporin NUP159
Organism
pco
Phanerochaete carnosa
Brite
KEGG Orthology (KO) [BR:
pco00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pco03019
]
PHACADRAFT_26411
Messenger RNA biogenesis [BR:
pco03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
PHACADRAFT_26411
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
YL1
Nop14
ANAPC4_WD40
Motif
Other DBs
NCBI-GeneID:
18918745
NCBI-ProteinID:
XP_007392712
JGI:
Phaca1_26411
UniProt:
K5X4U4
LinkDB
All DBs
Position
Unknown
AA seq
1932 aa
AA seq
DB search
MNVSRLHASVAPSAQRIIKDGEEKDADFLTLRLLNKRSRVKLSPDSVKLDPLPGKGVLFA
IANSLDCFAAATYTAPDGHNIMISGLAELRSSFASSDSDAPIPFTPRRTITLPAQPNILA
FASNDSKLIVGLLSGSTAVYDTTSISTSGLSTVQPLHLFPSPTGRPPKDILANPGDIPDL
VVVLYEPGSPPDAAIIELLDVQKLQIVSGWQSGGTPDTTPASVCWSPKGKQLAIGMQSGD
IFTFAPNSTSAVKTMVPRPSSLPSEKLLSTFWLSNPGFYGIFTTPEALSPDADQTHMLMS
LDAKAGTITEIKLRAPFLPLPGMRPPGAFTILLRQWEPTKYLLFVGDSSSSDVGLIGCTE
VNGQEQWAHFTLEETSTPGMPLDQEMMDTVLLGLALDLTNTDSYTHKTASGEDQILPPPP
ILYAYASDGTVIGWHLLNTTGKPYSGMKLPVAPAILQAASESMETEAAPIISTSASIQTT
DQPMSGQQTPTASLLEHSGSTPVFGQSSVAQPSAFGQTSAFGSTDNSISPFGAKPSPGFS
AFASVGPSKFDQLSGTGSSAPASQTPTSPALASPMAVSLSNSGIGKVDLDISMDSTTGSG
FGNLSLDDASHPIDSGKSKAAGNGMFGSFTSPSAPPNTSTPFGSAVPSSSLLKPATGFGA
FGGQSSGYGFGAISSGSAADTTSTPSPTFGTSGFAAIKPASPSPAFGSSGFGTQPGFGQS
AFGQPAFGQSAFGQSPASSSPFNSSIGAPASGGFAAFASGTSTLSTAAEQSLDSESVGST
QPKEKSPTQPSTPVKPSGAPSTPNVFSSSASAKPTTGGVFSNSVSSPSGFGKLDSGFGAF
GSSATPSSSPFFNPPKAPTTPSAFSGTPLALSVGPLAPSTPTPAAKPVFGAPSAFGQPSA
LGAAATTEQNRSAFGALSSPGSPSTFGQSAFSGLGGNSASTKGFGNFTGGGGGFGTFSGE
KKSFSELLKGDTDKGKVKSKDEGREAPKGPASVFNNPPPLPAASTSEPKPSLSKQGQPQR
TTVFGVPLDKKPGDIAPVDKRDRAASLSRGDELDGDDEDAKHHEDGDDEDFLSDSFDEED
EEGEEEEEEEEEEEEEEEEEEEREEAAEGDSGLILPGSSEAATPPAAGPTIHLTDSSPPA
SPEKRKEPVPDDIRTPSSSPDKQASPPAVVSPSPVAATSSSPLSLLGRPTTQPKRSSPLA
STPINRDSDDDTTDRLPLAPPSKFHASVEADASTLSPKSATEKPPSPVLVPTGEGLKSRP
KTPPLQAVFGAAPAMPKPAPFTLTPATPSPPPVFGSPPLASSSPKPDTGFSSAFSKGPAV
FSAPPSRPATPTLRVDNAASVPAVSPLFPSLTPGGSLFTSKTNPPMPTKAEGPTTSFGIS
PSGGLFEQRPSMAFTSTPSTHSGGSFTAAKPPPTTLPIFGQPALVGQNPVSVPQTPLAVG
LFAPKSAATTPVPTSFAASKHVAEPLPASGSALANTSQMGPLANMEDGMSKECTNLLIVM
ARELEILTQEAAKLGDRMKEHYKMSNVSRTTVDLRDPSKWLLADVEEFSRLLQYLERDIM
ELKNVRASYSKAIRELETAMLKGSNFMAAATMRKEEIVRFSKANNDVEFAKMLKARTLGP
EHLETQAQLRRGIRLLRDRIQKLEEHLMASHKRLSQLKMGKAGLRPPSLDTINRTYRNID
IAIKQQADDIVHLSQRLSKLNFTTSPNRAVVDFRSSPSKRTRDTTPNVAATTAAALNAER
AAQRLKSALLKARKEPLLNKQAVDAPSPPSELDFMIKEESSKKELSLNSSLFNSNGETTQ
TSGRNEPSFDVGDIQPSTPSHGHRQRESRHGKSVQLKKSSGSLAASATSPPAGFSWGPIP
GATSPYKLPFSLTPTKADDAGRSSLPFSFTSRKDSDEHHSALSFPSTPKKDEDKTFSLSS
SWVTEDFEKEKQ
NT seq
5799 nt
NT seq
+upstream
nt +downstream
nt
atgaacgtgtctcgtctacatgcatcggtcgctccttctgcacagagaattataaaggat
ggagaggagaaggatgcagacttcctcaccctgcggctactgaacaagaggtcacgcgtc
aaactctcccctgattccgtgaagctcgaccctctccccggcaagggcgtattattcgct
attgctaactcattggactgtttcgccgctgccacatataccgcgcccgatggacataac
attatgatttctggacttgctgagcttcgcagctcattcgcttcatcggactctgacgct
ccaatacctttcacaccccgtcgtacaataacgctgccggcgcaaccaaacattcttgcc
tttgcttcgaacgactccaagctgatcgttggtttactctctggctcgactgccgtatat
gacaccacgtccatttccacatccgggctaagtactgttcagcccttgcacttgttccct
tctcccacaggtcgtccgccaaaggatatcctggccaatccaggggacatacctgacctc
gttgtggtactttatgagccaggcagcccccctgatgccgccattatcgaattgctcgac
gtacagaagctgcaaattgtgagtggttggcaaagcggtggcacgcccgatactacgccg
gcttcagtttgttggtcgccgaagggaaagcagcttgcgattgggatgcagagcggcgac
atattcactttcgctccgaacagcacctccgctgtcaaaacaatggtgcctcggccatcc
tctctaccatccgagaaactattatccacattctggctgtctaatccaggcttctatggc
atctttacaactcctgaagctctgtctccggatgccgatcagacacatatgctcatgtct
ctggatgccaaagctgggacgatcacagagatcaagctgagagcaccctttctgccttta
cccgggatgcgaccacccggggccttcaccatcctcttgcgtcagtgggaaccgacaaag
tatctattgttcgttggtgacagcagctcttccgacgttggtctcataggctgcacagag
gtcaatggtcaggaacaatgggctcatttcacgctcgaagaaacctccacgccaggtatg
ccactcgatcaggagatgatggacaccgtcttgcttggtctcgcccttgatctcacgaac
accgactcgtatacgcataagacagcttctggcgaagaccaaatattacctccccctccg
atcctgtacgcatatgccagcgacgggactgtcataggatggcatttactcaacacaact
ggcaagccgtactcagggatgaaacttcccgtagctccagctatcctgcaggctgccagt
gagagcatggagactgaggccgcgcccataatatcaactagcgcatctattcagaccacg
gatcagcctatgagtggacaacagactcctactgcatcgttgctcgagcactctggttcc
actcccgtgttcggccagagcagcgtcgcccagccgtcggcctttggccagacctcagca
ttcggtagcacggacaactcaatatcaccgttcggagcgaagccatcaccaggttttagc
gcatttgccagcgtggggccgtcaaaattcgatcagctatctggcaccggttcaagtgct
ccagcgtcgcaaacgccgacgagtccagcattggcatcacccatggccgtctcgctgtca
aattcgggcattggcaaggttgatttggatatatcgatggattctaccactggcagtgga
ttcggcaatctgtctctcgacgatgcgagccacccaatagactctggcaagtcgaaggcc
gcagggaatggcatgttcggctccttcacatctccctcggcacctcccaatacaagcaca
cccttcggatctgcagtgccttcgagcagcttgctcaagcccgccaccggatttggcgcc
ttcggtggacagtcttctggatacgggtttggtgcaatttcttcaggcagcgccgcagat
actacctcaactccctcgcctactttcgggacctctgggtttgctgctatcaagccggca
agtccatcaccagcgttcggttcgtcaggctttgggacccaaccaggctttggacagtct
gcatttggacaacctgcgttcggtcaatcagcatttggtcagtctccggcttccagctca
cccttcaattcctccatcggcgcgccagctagtggtggcttcgctgcgtttgccagtggg
acgtccacattgagcacggctgctgagcagagcctggactcggagtccgttgggtctact
cagccgaaagagaagagccccacacagccatcaactccagtgaagccttctggagctccg
agcacgcccaacgtgttttcgtcgtcggcctctgcgaaacctactacaggaggggtgttc
tccaattctgtgagctctccctctggctttggaaaactggattccggcttcggtgcattt
ggctcttctgctaccccttcatcctcgcccttctttaaccctccgaaagctccaacaacg
ccaagtgccttcagcggtacgccgctggcgctctccgttggacctttagccccgagcacc
cctacaccggccgccaaaccagtatttggtgcgccgtctgcattcggtcagccatctgcg
ctcggtgcagctgcaacgaccgagcagaataggtccgcattcggcgcgctgtcgtctccg
ggttcgccctcgacatttgggcagtccgcgttttccggtctaggcggcaatagcgcaagc
accaaagggtttggcaactttactggcggtggtggtggcttcggcacattctctggggag
aaaaagtctttcagtgagcttctgaagggcgatacagataagggcaaggtcaagagcaag
gacgagggcagggaagcgccaaaaggcccggcttcggtcttcaacaatcctccacctctc
cctgcggccagcactagcgagcccaagcctagtctgtcaaagcaaggacagcctcaacgg
acaaccgtctttggtgtccccctggacaagaaaccgggtgatatagcacctgttgacaag
cgagatagagctgcgtctctttctcgtggtgacgagttggacggcgacgacgaagacgcc
aaacaccatgaagatggcgatgacgaagattttctttctgattcttttgacgaagaggat
gaagagggggaggaagaggaagaggaggaagaggaggaagaggaggaggaagaggaggag
gaggagagagaagaggctgcagaaggcgacagtgggctgatcttgcctggttcatccgaa
gctgccactcctccagcagcggggcctacgattcatctgaccgattcttcgcctcctgca
agcccggagaaaaggaaagagcccgtaccagacgatatcaggaccccgtctagctctccc
gataagcaagcttctccgcctgcggttgtttcaccatctccagtggccgcgacgtcctca
tctcctcttagtctactcggcagaccaaccacgcagcccaagcgcagctcgccattggcc
agtacgccgataaacagggacagcgatgatgacacgacagataggctccctcttgcgcct
ccatccaaatttcatgcatctgtagaagcggatgcctctacactgtcacctaaatccgct
actgaaaaacccccatcacctgttctcgtgccaacaggcgaaggactcaagtcgcgcccg
aagacaccacccctccaggcagtgttcggtgcggctcctgcgatgcctaagccggctcct
ttcacacttacccccgctactccatcaccacctccagtgtttggatcgcctcctttggcc
tcgtcgagtcccaagccagacactggattttcatcagctttctcaaaaggacctgcagtc
ttcagcgcacctccgtcgaggcctgctacgccaacactcagagtagataatgccgcgtct
gttcccgccgtgtcaccattgttcccctccctgacacccggtggctcactcttcacgtcg
aagacgaatccgccgatgccaacgaaagcagaggggcctacgacgtcgttcggtatttcg
ccctctggcgggctatttgaacaaaggccgtcgatggcgttcacgtctactccttccacc
catagtggcggatcatttaccgctgcgaagcccccacctacgacactccctatcttcgga
cagcccgccttagttggacagaatcccgtgtcggtaccgcaaaccccacttgcagtcggt
ctcttcgcgccgaaatcggctgctaccactcccgtgcctacatcatttgcggcatcgaag
catgttgctgaaccgctccctgcttctggctcagcattggcgaacacgtcgcaaatggga
ccgcttgctaatatggaggacggaatgagcaaggagtgcacaaacctcctaattgtcatg
gctcgagagctcgagatcctcacgcaagaggctgcaaaactaggcgacaggatgaaagag
cattacaaaatgagcaacgttagtcgcaccacggtagacctgcgcgacccaagtaaatgg
ctactggcagacgttgaagaattctcgcggctgctgcaatacctggaaagggatatcatg
gagttgaagaacgttcgagccagctactcgaaggctatccgcgagctcgaaactgccatg
ttaaaaggttccaatttcatggccgcagcgacgatgcgcaaagaggagattgttcgtttc
agcaaggccaacaatgatgttgagtttgcgaaaatgctcaaggcacgaacccttggtccg
gagcaccttgaaacacaagcccagttgcgtagaggcatccgacttcttcgtgataggatc
caaaagctcgaggaacatctcatggcttcacataagagacttagccagttgaagatgggt
aaagctggcctgagaccaccctcactggataccatcaatcgcacttaccgcaatatcgac
attgctataaagcagcaagcagatgatatcgttcatctgtcgcagcgcttgtcgaagctc
aacttcacgactagtccgaaccgggctgtggtagatttcaggtcgagccccagcaagcgg
acgcgcgataccactcccaacgtcgcagccacaacagccgcggcattgaacgctgagcga
gcggctcagaggttgaagagtgctctgctgaaggcacgcaaggagccgctgcttaataag
caagctgtggatgcgccatccccaccgtcagagctcgacttcatgatcaaggaagagtcg
tccaagaaagagctgtcgctgaactcgtccctgtttaactcgaacggtgagacaacccag
acgtctggacggaatgagccctccttcgacgtaggcgatatccagccgtcaacgcccagc
catggacacaggcaacgcgagtcccgacacgggaaatcagtccagttaaagaaatcttct
ggctctttggcggcatcggcaacgagtccaccagcggggttctcctggggaccaatcccc
ggtgctacttccccttataagctgccgttctcgctcacgccgacaaaggcggatgacgct
ggccgcagttcgttaccgttctcgttcacctcgagaaaggacagcgatgagcatcacagc
gccctatcattcccgtccactcccaagaaggacgaggataagactttctctttgtcgagc
tcctgggtgacggaagactttgagaaggagaagcagtaa
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