Phanerochaete carnosa: PHACADRAFT_265217
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Entry
PHACADRAFT_265217 CDS
T03128
Name
(RefSeq) hypothetical protein
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
pco
Phanerochaete carnosa
Pathway
pco03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pco00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
PHACADRAFT_265217
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pco03019
]
PHACADRAFT_265217
03110 Chaperones and folding catalysts [BR:
pco03110
]
PHACADRAFT_265217
03029 Mitochondrial biogenesis [BR:
pco03029
]
PHACADRAFT_265217
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pco04147
]
PHACADRAFT_265217
Enzymes [BR:
pco01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
PHACADRAFT_265217
Messenger RNA biogenesis [BR:
pco03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
PHACADRAFT_265217
Chaperones and folding catalysts [BR:
pco03110
]
Heat shock proteins
HSP60 / Chaperonin
PHACADRAFT_265217
Mitochondrial biogenesis [BR:
pco03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
PHACADRAFT_265217
Exosome [BR:
pco04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
PHACADRAFT_265217
Exosomal proteins of other body fluids (saliva and urine)
PHACADRAFT_265217
Exosomal proteins of breast cancer cells
PHACADRAFT_265217
Exosomal proteins of colorectal cancer cells
PHACADRAFT_265217
Exosomal proteins of bladder cancer cells
PHACADRAFT_265217
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cpn60_TCP1
Rubella_E2
Motif
Other DBs
NCBI-GeneID:
18919045
NCBI-ProteinID:
XP_007401713
JGI:
Phaca1_265217
UniProt:
K5VSU5
LinkDB
All DBs
Position
Unknown
AA seq
597 aa
AA seq
DB search
MHHLSHNSTRALRRAAARAARPSLTRGAHKEIKFSNDGRASILKGVDVLADAVSVTLGPK
GRNVIIEQSFGGPKITKDGVTVAKSISLKDKFENLGARLVQDVAQKTNEIAGDGTTTATV
LARAIYSEGVKNVAAGCNPMDLRRGSQAAVDRVVEFLSSQAKTITTTAEIAQVATISANG
DTHIGNLIAQAMEKVGKEGVITVKEGRTIEDEIEITEGMRFDRGFTSPYFVTDVKTQKVE
FEKPLILLSEKKISALQDILPSLEIAAQQRRPLLVIAEDVDGEALAACILNKLRGQLQVC
VVKAPGFGDNRKSILGDLAILTGGTVFTDELDIKLERVTADMLGSTGSITITKDDTIVLN
GEGSKDAIQARCEQIRALVADPTTSEFDKTKLQERLAKLSGGVAVIKVGGSSEVEVSEKK
DRYDDALNATRAAVEEGILPGGGVALLKASLMLSSSAPSGSSLPTSPDAKPLPTANFDQD
LGVQIIRRALTYPARTIYKNAGEEASVIVGTLQQQYATADKFAWGYDASKGQYVDMIQAG
IVDPLKVVRTALVDAAGVASLLTTSEACVVEAPEEPGKAPMGGMGGGMGGMGGMGGF
NT seq
1794 nt
NT seq
+upstream
nt +downstream
nt
atgcatcacctctcgcacaactctacccgcgctctgcgccgtgctgctgccagggctgct
cgtccgtcgctcacccgcggcgcgcacaaggagatcaagttctccaacgacggccgtgcg
agcatcctgaagggtgttgacgtcctcgccgacgccgttagcgtgacgcttggcccgaag
ggtcgcaatgtgatcattgagcagtccttcggtggtccgaagatcactaaggatggtgtt
actgttgcgaagtccatctctcttaaagacaagttcgagaacctcggtgcccgtcttgtc
caggatgtcgcgcaaaagactaacgagattgctggtgatggcactaccacggccactgtc
ctcgctcgtgcaatttattcggagggtgtaaagaacgttgctgctggctgcaacccaatg
gacctccgccgtggctcgcaggctgctgtagaccgtgttgtcgaattcctctcgtcgcaa
gccaagacaattaccaccaccgctgagattgctcaggtcgccactatctctgctaatggt
gatacccacatcggcaacctcattgcccaagccatggagaaggttggcaaggagggtgtc
atcactgttaaggagggccgcaccattgaggacgaaattgagatcactgagggcatgcgc
ttcgaccgtggtttcacctctccgtacttcgtcaccgatgttaagacccagaaggtcgag
ttcgagaagcctctcatcctcttgagcgagaagaagatctctgcactccaagatattctt
ccctccctcgagattgccgcccagcagcgccgcccgctgcttgtcattgctgaggacgtc
gatggcgaggcccttgctgcatgtattttgaacaagctccgtggtcaactccaggtttgc
gttgtcaaggctcccggatttggcgataaccgcaagtctatcctcggcgatctcgcgatc
ctcactggtggtaccgtcttcaccgatgaactcgacatcaagctcgaacgcgtcaccgct
gatatgctcggctcgactggttctatcactattactaaggacgacactatcgtcctcaac
ggcgagggcagcaaggacgcgatccaggctcgctgcgagcagatccgcgcgctcgttgcc
gatcccacgactagcgagttcgacaagaccaagctccaggagcgtctcgcgaagctttcc
ggcggtgtcgctgtcatcaaggtcggcggcagcagcgaggtcgaagtcagcgagaagaag
gaccgctacgacgatgcgctgaacgcaactcgtgctgctgtcgaggaaggtatcctcccc
ggtggtggtgtcgctctcctcaaggcatcccttatgctctcttccagcgcgcccagcggc
tcgagcctgcccacctcccctgacgcgaagcccctcccaaccgcgaacttcgaccaggac
cttggtgtgcagatcatccgccgcgcgctcacctaccccgcccgtacgatctacaagaac
gcgggcgaagaggcgtccgtcatcgttggtacccttcagcagcagtacgctactgccgac
aagttcgcgtggggctatgacgcgagcaagggtcagtacgtcgacatgatccaggccggt
attgtcgacccgctcaaggttgtccgcaccgcgctcgttgacgccgctggtgttgcttcg
ttgctcaccacttccgaggcgtgcgtcgtggaggcccctgaggagcctggtaaggcccca
atgggcggcatgggcggcggcatgggtggaatgggcggcatgggcggcttctga
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