Phanerochaete carnosa: PHACADRAFT_30808
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Entry
PHACADRAFT_30808 CDS
T03128
Name
(RefSeq) hypothetical protein
KO
K10981
DNA polymerase IV [EC:
2.7.7.7
]
Organism
pco
Phanerochaete carnosa
Pathway
pco03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
pco00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
PHACADRAFT_30808
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pco03400
]
PHACADRAFT_30808
Enzymes [BR:
pco01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
PHACADRAFT_30808
DNA repair and recombination proteins [BR:
pco03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
X-family DNA polymerases
PHACADRAFT_30808
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol_B_palm
DNA_pol_lambd_f
HHH_8
DNA_pol_B_thumb
NTP_transf_2
Motif
Other DBs
NCBI-GeneID:
18919651
NCBI-ProteinID:
XP_007398531
JGI:
Phaca1_30808
UniProt:
K5VLI0
LinkDB
All DBs
Position
Unknown
AA seq
1125 aa
AA seq
DB search
MSQLYKLRLSLLIPRNPNLGHAVGERFEGTVSIQYLLSLRAIHGPFWPRDTDSPKCESLP
RRSGALIRPGRGRDPRHLLELAPRPLCLFARGYHSHSPPHIFEKMDCDAATNFFVEQDDR
MNAPDETEEEFAARVGDRRSAQGSSSVRTGQHSSDHRTKTPRDATISAMRHSMCVRQKPK
ASPLSAYAGEDTIGQDAYMSNPEECIHSGKRKSPDQASRESGAPEKKRRQQSLTNLTAAS
RNVYNPACNSVQTDSPGTCHTRSFDKGPKAGKLIVYEEPNDDQVGRSSKLVDGGMSSLSA
SPIIMQQHESHQSDLDPNFIPAVVTSASGLSQECSPQHRQAVSQQIRAYHSPPPDIQAAT
LDEPSAQRSSLIRATSFEDGVAAPSSSAVKSEFERGNSGRARTPGNARARNGSPSCTAAA
VSPSSGDTTTAASTQNANEQPPPSFPPRTKTTSRKKKVNDEQPPSGAHVEESAAKPKKRP
LREQKEMSPAEFAAYISQVTSLNAPKKAKNTTFLKGMRIYYVGCDTDKAGERTRTKMQRL
VAFGATLMPTYDPAEIEIIITEPKLTQEQFCAKHGLQSVKDVPAHIPILKTSWVTSGEER
PRLDRWERHPSYKDHVVKQPDPAEANRAPVLRPTTASQDKLKANGAANRDRKNEAKVRKQ
RLANSDESDFDSERQSTRCASQFTEGHADKEKAAVSAEAQPDLPPKQGCLSGSSFGAAGS
GGPSAEGESSRIPVPPGADSSEDPLAQYYGVARAEQEEELEGYFEVEPPVILGGQRSHFQ
CDNVPDYRPKLGECPNQDIIDIFTQLKEIYEIRKAESDNFRADTYRKVIKSLREYPKRIE
SREELVQINGAGKKTKDKIMEIIKTGRLRRLQFEMTAELDVLRLFQGIYGVGSITSLKWY
AAGCRTLDDIHQRKGGIKLSDAQELGLKYYDDINSRISRQEVGEIFQRIKDIAHGIDKKL
IVEIMGSYRRGKADCGDIDILITRPTDDKKHHKGLAQRMVNLCQMHGIIVDHLSIPSNWW
STELVYHGLCRRDDDSPVRRLDFLAVPYEQRGAALLYFTGDDIVSVLLIQLHAQFNRSMR
AKANKMDYSLNQRGLYDMVVRNSSKRSEKLSEGALLRTSFTMVRC
NT seq
3378 nt
NT seq
+upstream
nt +downstream
nt
atgtctcagctgtacaagcttcggctaagtctgctgatcccaagaaatccgaatttagga
cacgctgtcggagagcgcttcgagggtactgtttccattcagtatcttctcagcttgcga
gcaatacatggcccgttttggccaagagacactgactcgcccaagtgtgagagtctgccg
cgccggtcgggagccctaattaggccaggtcggggccgggacccacgacacttgctcgaa
ctcgcgccgcggcccctctgtctctttgccaggggctaccacagccattcccctccccat
attttcgaaaaaatggactgtgatgcggccacaaatttttttgtagagcaagacgaccgg
atgaacgcgcctgacgaaactgaagaagaattcgcagctcgtgtgggtgacagacggtct
gctcaaggaagctcttctgtccgcacagggcagcatagtagtgaccatcggacgaagacg
ccgcgagacgcgacgattagcgcgatgcgccacagcatgtgtgtccgacagaagccaaaa
gcatctccactttccgcatacgcgggagaagatacgattggccaggacgcttatatgtcg
aacccggaagagtgcatacacagcgggaagaggaagtctcctgaccaagcatcaagagaa
agcggggccccagagaagaaaagacgtcagcagagcctgaccaatctgaccgcggcctct
cgtaatgtttacaatcccgcatgcaactctgtgcagaccgacagtcccggtacctgtcat
acccgcagctttgacaagggtcctaaggcagggaagcttatcgtatacgaggaaccgaat
gatgaccaggtgggaagatcgtctaagctcgttgacggaggcatgtcgtctctgtcagcc
tctccgatcataatgcaacagcatgaatcacatcagagtgacctcgatcccaatttcatt
ccagccgtggtaacgtcggcgtccgggctatcccaggaatgttcacctcagcatcgccag
gcagtgtctcagcagatacgcgcgtaccattcgcctccgcccgacattcaagcggcgact
ttagacgagccctctgcccagcgtagctccctgattcgggcgacatctttcgaggatgga
gtcgcagcaccgtcgtcatcagcggtgaagagtgaatttgagcgcgggaacagcgggcgc
gctcggacacctgggaacgcccgcgctcgaaatgggagccctagctgcactgcagcggcc
gtcagtcctagctcgggagacaccaccactgccgccagtactcagaacgcgaacgaacag
cccccgccttcctttcccccgcggacgaagactacatcgcgcaagaagaaagtgaacgat
gagcaaccaccaagcggtgcgcatgtggaagagtcggcggcaaagcccaagaaaaggccc
ctcagggagcagaaggagatgagcccggccgagttcgcggcatacattagccaggtaact
tccctgaatgcgccaaagaaagcgaagaacacgacgttcctcaagggtatgagaatctat
tacgtgggctgcgatacggacaaagctggcgagcggacaaggacaaagatgcagcggctc
gtcgcgttcggtgcgacactcatgcccacgtacgatcccgcggagatagagatcatcatc
accgagccgaagcttacccaggagcagttttgcgcgaagcatgggctgcagagtgtcaag
gatgtcccagcgcatataccgatcctcaaaacgagttgggtgacgtctggcgaagagagg
ccacggcttgaccgttgggagcgacacccgagctacaaggaccacgtagtcaagcagcct
gaccccgcggaggcgaatagggctcccgtgttgcgacccacgaccgctagccaggacaaa
ctgaaggcaaacggagccgcaaaccgcgaccggaagaacgaggcgaaagtccggaagcag
aggcttgcgaattctgacgagagcgactttgatagcgaaaggcagagcacaaggtgcgca
agtcaattcactgaaggccatgcggacaaagagaaggcagcggtgtccgcggaggcccag
ccagatctgcctccaaaacaaggttgcctctcgggatcttcattcggcgctgccggtagc
ggtggcccttctgcggaaggcgagtcgtcacgcatcccggtaccgcctggtgctgacagt
agcgaagaccctttggcacagtattatggcgtcgcgcgagccgagcaggaggaagagctt
gaagggtactttgaagtcgagccgcctgttatcctaggtggacaacgttcgcatttccaa
tgcgacaacgtaccggattaccggcccaagttgggagaatgtcctaatcaggacatcatc
gatatcttcacgcagttgaaggaaatatacgagatcagaaaagcggagagcgataacttt
agggcagacacgtatagaaaagtcatcaaaagccttcgagagtatccgaagaggatagag
tctcgcgaagaactggtacagatcaatggcgctggaaagaagactaaggataagattatg
gaaattatcaagaccgggcggctacgtcgcctgcagttcgagatgaccgcggagcttgac
gtgttgcgactgttccagggcatctacggtgttgggtctatcacatcattaaagtggtac
gcggctggctgccggaccttagacgacatccaccagaggaagggaggcatcaagctcagc
gatgcgcaggagctcggcctcaagtattacgatgatataaactcgcgtatctctcgccag
gaagttggcgagatattccaacgcattaaggacatcgcccacgggattgacaagaagctc
atcgtcgagatcatggggagctaccgcaggggaaaggctgactgcggggatatcgacatt
ctcatcacacgcccgacagatgataagaagcatcacaagggccttgcgcagcggatggtg
aacctctgtcagatgcacggcatcatcgtcgaccacctcagcattcccagcaactggtgg
agcaccgagctcgtgtatcacggcctctgtcgcagggacgatgatagtcctgtgcggcgc
ctcgatttccttgctgtaccatacgagcaaaggggcgctgcgctgctgtactttactggc
gacgacatcgtcagtgttctgcttattcagttgcatgcgcagttcaaccgctcgatgcgc
gccaaggcgaataagatggattactcgttgaaccagcgcggcttgtacgacatggtcgtc
aggaattcgagcaagagatcggagaagctcagcgaaggtgctcttttgcgcacctctttc
actatggtgcggtgctga
DBGET
integrated database retrieval system