Phanerochaete carnosa: PHACADRAFT_84000
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Entry
PHACADRAFT_84000 CDS
T03128
Name
(RefSeq) hypothetical protein
KO
K12613
mRNA-decapping enzyme subunit 2 [EC:
3.6.1.62
]
Organism
pco
Phanerochaete carnosa
Pathway
pco03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pco00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
PHACADRAFT_84000
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pco03019
]
PHACADRAFT_84000
Enzymes [BR:
pco01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.1 In phosphorus-containing anhydrides
3.6.1.62 5'-(N7-methylguanosine 5'-triphospho)-[mRNA] hydrolase
PHACADRAFT_84000
Messenger RNA biogenesis [BR:
pco03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
PHACADRAFT_84000
mRNA degradation factors
5'-3' decay
Decapping complex
PHACADRAFT_84000
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DCP2
NUDIX
NUDIX_4
Motif
Other DBs
NCBI-GeneID:
18920426
NCBI-ProteinID:
XP_007390494
JGI:
Phaca1_84000
UniProt:
K5WNN0
LinkDB
All DBs
Position
Unknown
AA seq
221 aa
AA seq
DB search
VTQKYHSRFILNLPEAELASLERVCFQVEQAHWYYEDFVREQDPSLPTMTLKKFSHSLFH
VCPLLSHWGDDHEQTFQNFMAYKTRVPVCGAIMLNETWDKCLLVKGWKSTSAWSFPKGKI
NEQEPRHRCAVREVLEETGYDLSEQINPADVVELSIRDQSLSLYIVSNVPEEYPFATRTR
KEISKIAWFKLQDLPTWKRNKSVPGKFYLITPFIGCVRYLL
NT seq
666 nt
NT seq
+upstream
nt +downstream
nt
gttactcaaaaataccacagtcgattcatcctaaaccttcccgaggcagaactggcttca
ctagagcgggtatgtttccaggtggaacaggcacattggtactacgaagatttcgtccga
gaacaagatccgtccctccctacgatgactctcaagaaattctcacacagtctcttccac
gtttgccctcttctcagccactggggtgacgaccatgagcagacatttcaaaacttcatg
gcatataagacccgagttcctgtatgtggtgcgataatgctaaatgagacatgggacaag
tgtctgctcgtgaagggttggaaatctacctccgcatggagcttcccgaaaggcaagatc
aatgaacaagaaccgaggcatcgatgtgcagtgcgcgaagtgttggaagagacgggctat
gacttaagcgaacagattaaccctgcggacgttgtagagctgtcgattcgagaccaatca
ttgtcactgtacatcgtgtccaacgtacccgaagagtacccctttgccactcgaacacgc
aaggagatcagtaaaatcgcttggttcaagctccaagatctcccaacgtggaagcgtaac
aagtctgttcctgggaagttctatctcatcacgcctttcatcgggtgcgtccgctatctc
ctgtga
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