Entry |
|
Name |
(RefSeq) hypothetical protein
|
KO |
|
Organism |
pco Phanerochaete carnosa
|
Pathway |
|
Brite |
KEGG Orthology (KO) [BR:pco00001]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
PHACADRAFT_84769
09124 Replication and repair
03420 Nucleotide excision repair
PHACADRAFT_84769
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:pco03021]
PHACADRAFT_84769
03400 DNA repair and recombination proteins [BR:pco03400]
PHACADRAFT_84769
Transcription machinery [BR:pco03021]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
PHACADRAFT_84769
DNA repair and recombination proteins [BR:pco03400]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
PHACADRAFT_84769
|
SSDB |
|
Motif |
|
Other DBs |
|
LinkDB |
|
Position |
Unknown
|
AA seq |
344 aa
MNGESLPQTSRIPLYEGSTQFRHWRFSPEQLAETRSLLNAAAVAVIRDAFESDQPGSSSQ
VSFLSAEEENLLVKLYLGKIPQLCGIFRFPEEVEATAMSYLKRFYLKNTVMDWHPKNVML
TVVFLATKTTNYPIPLDAYASRIPKTTPGDVLDLEFLVAQSLGFDFTIWHAHRALWGLWL
DIQTLSDIPLDDLSKAYDGALTSIRASRFTDAEFIYTPSQIALACLSIASPALASAWLRS
KSGQGSDDAISAMLEPLKAMVLSQGSLPDVEAVREVDRRLRLCKNPEKIPGTNAYNKKVA
EKQRKAEEKRLRKAELQRKAMEDGDPFGSTLTAQADLDDDDDDE |
NT seq |
1035 nt +upstreamnt +downstreamnt
atgaacggcgagagccttcctcaaacctcgaggattccgttgtatgaaggcagcacccaa
tttcgtcactggcggttctctccagagcaactggcggaaactcgtagtctgctgaatgct
gctgcggtagcagttatccgtgacgcttttgaaagcgatcagccaggctcctcatcgcaa
gtctccttcctgagtgccgaagaagagaaccttctcgtgaagctctacctcggaaaaatc
ccacagttatgtggaatcttcaggtttccggaagaggtagaagccacggcaatgtcttat
ctcaagcgattctaccttaaaaacacagtcatggattggcatcctaagaacgtgatgcta
accgtcgtcttcctggcgactaagacaacgaattaccctatacctctagatgcgtacgcc
agccgaattcctaaaactacgccaggtgatgttctcgacctcgagttccttgtggcgcaa
agcctcggattcgacttcactatatggcacgcacaccgcgcactatggggcctgtggctt
gacatacagacgctgtcagacatccccctagacgatctcagcaaagcctatgatggagcg
ttgacgagcattcgtgcatctcgcttcacagatgctgagtttatctacacgccgtcacag
atcgcacttgcctgtctctccattgcgtcgcccgcgcttgcttctgcatggttgcgctcg
aaatccggtcagggatccgacgatgcaatttccgctatgctggaacctctaaaagcgatg
gtcttgtctcagggatcgcttccggatgtagaagctgtccgggaggttgaccggcgtctg
cgattatgcaaaaaccctgaaaagatcccgggaaccaatgcgtacaataagaaggttgct
gaaaagcagaggaaagcggaagagaaacggctgcgaaaggctgagctacagcgcaaggca
atggaggacggggatccgtttggaagcacacttactgcgcaagcggacttggatgacgat
gacgacgacgagtga |