Phanerochaete carnosa: PHACADRAFT_85303
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Entry
PHACADRAFT_85303 CDS
T03128
Name
(RefSeq) hypothetical protein
KO
K10752
histone-binding protein RBBP4
Organism
pco
Phanerochaete carnosa
Pathway
pco03082
ATP-dependent chromatin remodeling
pco03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
pco00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
PHACADRAFT_85303
03083 Polycomb repressive complex
PHACADRAFT_85303
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pco03036
]
PHACADRAFT_85303
Chromosome and associated proteins [BR:
pco03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
CAF-1
PHACADRAFT_85303
Histone modification proteins
HAT complexes
HATB complex
PHACADRAFT_85303
HDAC complexes
Sin3A-HDAC complex
PHACADRAFT_85303
Polycomb repressive complex (PRC) and associated proteins
PRC2.1
PHACADRAFT_85303
PRC2.2
PHACADRAFT_85303
Centromeric chromatin formation proteins
Kinetochore proteins
MIS16-MIS18 complex
PHACADRAFT_85303
Heterochromatin formation proteins
Other heterochromatin formation proteins
PHACADRAFT_85303
Chromatin remodeling factors
NuRD complex
PHACADRAFT_85303
NuRF complex
PHACADRAFT_85303
NuRF complex (fruit fly)
PHACADRAFT_85303
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CAF1C_H4-bd
WD40
WD40_CDC20-Fz
WD40_Prp19
Beta-prop_EIPR1
Beta-prop_TEP1_2nd
Beta-prop_EML_2
Beta-prop_RIG_2nd
Beta-prop_CAF1B_HIR1
WD40_WDHD1_1st
WDR55
WD40_MABP1-WDR62_2nd
EIF3I
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML
WD40_RFWD3
ANAPC4_WD40
WD_LRWD1
Beta-prop_WDR75_1st
MIOS_WD40
Beta-prop_SPT8
Beta-prop_WDR19_1st
Beta-prop_NUP159_NUP214
Motif
Other DBs
NCBI-GeneID:
18920493
NCBI-ProteinID:
XP_007390850
JGI:
Phaca1_85303
UniProt:
K5VEK1
LinkDB
All DBs
Position
Unknown
AA seq
453 aa
AA seq
DB search
MLEEEEDDFQAEEENKLINEEYKTWKKNAPFLYDVVITHALDWPSLTCQWFPDKESPPNK
PYTVHRLLLGTHTSGQAQDYLQIAELHLPKRDGSPSADKLDRSDYDDERGELGGHSIPPQ
PRINIIQKINHKGEVNRARYMPQNPDLIATKAVSGEIYVFDRTKHPSEPERGGQCRPDIT
LVGQRKEGYGLAWSPVKKGHILGASEDMTICHWDINSYTKAKTQIEPTTVFRGHTSVVGD
VDWHATRDWNFASVGDDKMLMVWDTRASSAPVFQLQAHDREILAVAYSPSIEHLLLTGSA
DNTIALHDMRNTHNKLHTFDGHTDEVLHLTWSPHNPSIFASASSDRRINTWDLSRIGFEQ
TPDDQEDGPPELIFVHGGHTARPTDFCWAPGEGENWTASSTSEDNIVMVWQPTMRIWAGE
EVKVDEKELEDESAMQGVESTESGTAGGSGDKA
NT seq
1362 nt
NT seq
+upstream
nt +downstream
nt
atgttggaagaagaggaggatgactttcaggccgaggaggagaacaagctcattaacgag
gaatacaagacatggaaaaagaacgcgccgttcctgtacgatgtcgtgatcactcacgcg
ctggactggcccagcctgacgtgtcagtggttccctgacaaggagtcaccaccgaataag
ccttacactgtccatcgtctcctgctcggcacgcacacgtctggccaagcccaggattac
ctccaaatcgctgaactacaccttccaaaacgtgatggcagcccttccgccgataagctc
gaccggtcagactatgacgacgagcgtggcgagctcggtggccattctatcccgccacag
ccacgcattaacatcatccagaaaatcaaccacaagggggaggtcaacagggcgcgttat
atgccccagaatcccgatctcatcgcgacaaaggctgtgtcgggcgagatctatgtgttc
gaccgtacgaagcaccctagcgagccggagcgcggcggtcagtgcaggcccgatatcacc
ttggttggacagcgcaaagaaggatatggccttgcctggagcccggtgaagaagggccat
attctcggtgcctcggaggacatgactatttgtcactgggacattaattcctacaccaaa
gcgaaaacacaaattgagccgacaaccgtcttccgtggtcacacgtccgtggttggggat
gtcgactggcatgcaacacgagactggaactttgccagtgttggagacgacaagatgctc
atggtttgggatacgagggcatcctcggcaccagtttttcaattgcaggcccatgaccgg
gagatcttggcggtggcgtacagcccttcgatcgagcacttgcttttgactggcagtgca
gacaacactattgccctgcacgatatgcgcaatactcacaacaagctacacaccttcgac
ggtcacacagacgaagttttgcacttgacttggtcccctcacaacccgagcattttcgcc
tcagcttcgagcgacaggaggattaacacatgggacctgtcaagaattggtttcgaacag
acgcctgacgatcaggaagacggtcctccggagcttatattcgtccacggtggccacacg
gctaggcccacggatttctgctgggcacccggcgaaggcgagaactggacggcttcgagc
acttcagaagacaacattgttatggtgtggcagccgacgatgcgtatctgggcgggagag
gaggtcaaggttgacgagaaggagcttgaagacgagtcagcgatgcagggtgtcgagagc
acggagtccggtacggcaggaggcagtggagacaaagcatga
DBGET
integrated database retrieval system