Phanerochaete carnosa: PHACADRAFT_87096
Help
Entry
PHACADRAFT_87096 CDS
T03128
Name
(RefSeq) hypothetical protein
KO
K15219
RNA polymerase I-specific transcription initiation factor RRN7
Organism
pco
Phanerochaete carnosa
Brite
KEGG Orthology (KO) [BR:
pco00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pco03021
]
PHACADRAFT_87096
Transcription machinery [BR:
pco03021
]
Eukaryotic type
RNA polymerase I system
Other transcription-related factors
Transcription initiation factors
PHACADRAFT_87096
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rrn7_cyclin_C
Rrn7_cyclin_N
Zn_ribbon_RRN7
NinG
Motif
Other DBs
NCBI-GeneID:
18920566
NCBI-ProteinID:
XP_007391801
JGI:
Phaca1_87096
UniProt:
K5W5N6
LinkDB
All DBs
Position
Unknown
AA seq
601 aa
AA seq
DB search
MAPRRRCAVCGSKQWRKEPSSGLITCSEGHVLQSYRNETSEVTELGPHQMRKRALKSRRK
KKEWQSKADPKLYHGERGRFHYYQCLQLLLRLQAAALIRAWKLPPEYEVVCRDVWTLHLS
LLPTPPTAEPYFHVQSQNGGQSAASGPQTAEEKPVQAKDELDSNDIDDEDAKSTFSLSTE
EGDDMDLEDLLRENSVAPSSASEDDDEDGSGPRVQQDQGQRKDKTAFRPFDSPAANIAIL
MLACWTLRLPVTYMDFKRLIESYDFPYLDPLRLLPEAVTQHLTKHTTKALSPQFPPIPLH
VHGLTSHLAKLMFSSYNILTPECNAAPLLWRATRALQGTPTLYLLAKKLGKVVSLTLTLH
YSLSPALRRVKMRDPEHHKYDNAPPEVALIAILIVALKLVYGFDGKKRVPRSGNDPACAL
PSFPDYFAAMQAAEDAEKTKRPAFLDTAPGSLESMLDLDETDIDKYIVFCQKALLPPGER
RAKIAVLDEYFPLSEPLATLDADVATEQPSPEPVPTKTMPATGLRENSSDLRPGRAYLIY
NSQDILGTLPDDYEKLLRRASDWTGVDEHYISGVVERYEHRLVRWWRTERGADKPEDSVS
C
NT seq
1806 nt
NT seq
+upstream
nt +downstream
nt
atggcccctcgtcggcgatgtgcagtctgcggctcgaaacaatggcggaaagagccttcg
agtggtctcattacctgcagcgaaggccacgtcttgcagagttacaggaatgaaacctca
gaagtaacggagctcggtcctcaccagatgaggaagcgagctcttaaatcccgccgcaag
aaaaaggagtggcagagcaaggctgacccgaaactgtaccatggggagcgtggcagattt
cactattatcagtgcctgcagcttctgttgcggctacaagccgctgctcttatcagggct
tggaagcttcctccggagtatgaggttgtctgcagggatgtgtggacgttacatctcagt
ctcctgcctactccgcccactgctgagccttattttcatgtccagtcacaaaatggtgga
cagtcagcggcgtcaggtccacagactgcagaggaaaagccggtgcaagccaaagatgag
cttgattccaatgatatcgacgatgaggacgcgaaatcgacgttttcgttgtcaactgag
gaaggggacgatatggatctggaagacctccttagggaaaactctgtcgcaccctcttct
gcatctgaagacgacgacgaagacggatctggtcccagagttcaacaagatcagggacaa
cgaaaggacaagaccgccttccgcccatttgatagccctgcagctaacatcgctatactg
atgcttgcatgttggacactccgtctaccggtgacatacatggacttcaagaggctgata
gagagctatgacttcccttatcttgatcccttgcggctattacctgaggccgttacgcaa
catctcaccaagcatactacgaaagctctttcgccgcagttccctccaatcccgttgcat
gttcatgggctcacctcgcatctggcaaagctcatgtttagctcctacaatattttgacg
ccagaatgtaacgccgcgccgcttttgtggcgagcaactcgggctctgcagggtactcca
actctctacctcctggccaagaaactcggcaaggtggtatcgcttacgctaactcttcac
tactcactatcgcccgcgttgaggcgggtgaagatgcgagacccggagcatcacaagtac
gataacgcgcccccagaagtagctcttattgctatcttgatcgtcgctttgaagttggtg
tatgggtttgacggaaagaaacgggtgccgcggtctggaaatgaccccgcttgcgcgcta
cccagcttcccagactactttgctgcgatgcaggcggcagaagacgcggagaagacgaag
agaccggccttccttgatactgcacctggctctttggagtcgatgcttgatctggatgaa
acagacatagacaagtacattgtgttttgccaaaaggctctgctacctccaggagagcgg
agagcaaaaattgctgttcttgacgagtactttccgctatcggaacctctcgctaccctg
gacgcggatgtagcgactgagcagccttcgcccgaacccgttcctaccaaaacgatgccg
gcgaccggactgcgcgaaaattcttcagacctgcgcccaggacgggcttatctcatctac
aatagtcaggatatcctcggaacattgcctgacgactacgaaaagctgcttagacgtgcc
tcggattggacaggcgtcgatgagcactacatctcgggcgtcgtcgagcgatacgagcat
cgcctggtacgctggtggcggactgaacggggagctgataaaccagaagactcggtgagc
tgttag
DBGET
integrated database retrieval system
