Phanerochaete carnosa: PHACADRAFT_96976
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Entry
PHACADRAFT_96976 CDS
T03128
Name
(RefSeq) hypothetical protein
KO
K20178
vacuolar protein sorting-associated protein 8
Organism
pco
Phanerochaete carnosa
Pathway
pco04138
Autophagy - yeast
pco04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
pco00001
]
09140 Cellular Processes
09141 Transport and catabolism
04138 Autophagy - yeast
PHACADRAFT_96976
04148 Efferocytosis
PHACADRAFT_96976
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pco04131
]
PHACADRAFT_96976
Membrane trafficking [BR:
pco04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
PHACADRAFT_96976
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_Vps8
Beta-prop_VPS8
TPR_VPS8_2
VPS8_N
Beta-prop_WDR36-Utp21_1st
Beta-prop_HPS5
Clathrin
WD40_CDC20-Fz
Beta-prop_WDR3_1st
WD40_Prp19
Beta-prop_EML_2
Beta-prop_THOC3
WD40
ANAPC4_WD40
Beta-prop_WDR3_2nd
WDR54
Beta-prop_WDR90_POC16_2nd
Beta-prop_LRRK2
WD40_2
Beta-prop_Vps41
Kdo_hydroxy
Beta-prop_EML
Motif
Other DBs
NCBI-GeneID:
18920955
NCBI-ProteinID:
XP_007397367
JGI:
Phaca1_96976
UniProt:
K5W6U9
LinkDB
All DBs
Position
Unknown
AA seq
1416 aa
AA seq
DB search
MRPFLHPTVSRLRSTTPQASRTSSVTSVGTIDSKLGISTPASHFSALSPTSSQSNLPEAP
THAHDAPSQDEREVFRWSQLRNITELLYQKHGQKIANLIGAPNFGSPTVLAANGLICVGT
NSGRILVFDFKQNLKCICGSSEHNIGAVTALTLSYDHTYVASGHASGHIQLFDLNNPKAP
ARFVAPTSLAEVVTGRQEGHLHGSRIVSIGFVAGRHTAVVSADDSGLAFYHSLGKVLFVE
ASDTLRILGKYPDEADPLHEPSAPGVPVHHQFRRRRIRKAHTILSMMPLPLGASAHPTDA
YNLVALLTPMKLVVVGLKPSPKTWYRRHREADDGASKSKFKGVLAWYPSTPSAGAPQDTQ
TNGKGRATNSTGTHPILIYGWGNTLNLVQVSESKMVQEVRNPKNSKVSRVEIGRVVFEEG
RSWTVGGDALALQWLNPNQVIVLTSAALEVFDINTFKLVEHVPFDAWSLVSPILSHTTNG
SVQYSDAVTEVAHSVRVYKGKIFLLGQHEVRVGTLLTWADRILSFVENGDFLSAIELARS
YYVGEAPGNRNGLPDDSQELQLVVGEKMRDLMVASARYAFAEERMMDDTHFSADGRGVDR
TSLFEGLVTTCSRACIALGEFDLLFEDLYSYYDDNGISRIFLTQLEPFIIDGTVHQVPPR
LTQRLVTLHEENGRPDLAERIIWHIDPECLDINQSIQLCQKYHLYDALLYVYMRAMKDYV
SPLVELIDLIRQVQRYRRRRAEASPNSKARLNDSDVEDIAINAYKIYPYLGNALAGLAYP
SGEPLSEDDAEQAKYDLYTFLFAGRSSMWPDPGGRLILTNEDDTNVEPTYPYARLLLRFD
AEAFLHTLDLAFEDHYLNDDEKHNTNRLIIVKILLEILSSPDTPQNDATFINIFIARNMP
KYSQFLKVAPSTLHSILIALVQDRDSSTREDRQLAAEYLLSAYTPHEGDRLVRIFERAGF
YRILRSWHRREHQWVPLIQAYLWDSDIPPAEKFSSLDEVLSTTAKYNKQEFPPEVTAIIN
ESLPSLLDASIPQTALLLDRHLPALHETVISTLADRPSRDRFLYLRSLLATSAQDSFQEL
GFTRVEPSPNTLPSLRNEYLRLLCEVEPGYVVSELHHLPPNFIDRKEAARICEEQGLYDA
VIWCMNDAGDAKGALHKADQFVEKLSDTLVELLKAGDVSEQSNECISALKNIQRRAVGVC
LEQSKGATDQHSELEQNWLELLRSQITCVHRVSLSCSPQVSSAKTIDEGDDPQLRAERAL
LDELRASVHETFNSLLSVSSTKAVSFPRLFKRLVDARDSRVTKGAQYTEFRAILGGMLES
YRSEGDMLVITKHLMSRDFFVLVEELAKARSKGWAPSRGICSTCGERLYDASKSAKAFAV
SGESESVPEDSAIIVSRTGVVYHRKCLPRQDTTNSV
NT seq
4251 nt
NT seq
+upstream
nt +downstream
nt
atgaggcccttcctacaccctaccgtctcccgacttcgctctactacgccccaggcttca
cggacctcatcggttacaagtgtcggaacgattgactccaagctcggcatttccacgccc
gcatctcatttctcagctctctcgcctacctcgtcccaatccaatctcccggaggctcct
acgcatgctcacgacgcgccttcccaggatgaacgcgaggtgttccgatggtcgcagctg
cggaacatcaccgagcttctataccagaaacatgggcagaagatcgctaacctcataggt
gcaccgaattttggttcccctaccgtcctagcggcgaacggcctgatatgcgttggaacc
aattccggaaggatacttgttttcgacttcaagcagaacttgaaatgcatctgtggctcc
tcagagcacaatattggcgctgtcacggctcttactctctcctatgaccatacgtacgtg
gcgtcaggacatgcctctggacacatccagctcttcgacttgaacaacccgaaggcgcct
gcacgcttcgttgcacccacatcgcttgcagaggtcgtcaccggaaggcaagaaggacat
ctccacggctcccgcattgttagcatcggttttgtggcgggaaggcataccgccgtcgtc
tccgccgacgatagtggtttggcgttctaccatagtcttggcaaggtcctatttgtcgag
gcttcggacactttgcggatcctaggcaaataccctgacgaggcagaccccctccacgaa
ccttctgcacccggagtgcccgtgcaccatcaattccgccgtcgaagaatacggaaagct
cacaccatcttgtcgatgatgccccttccgctaggtgcatccgctcatccgaccgatgca
tacaacctggtcgcgttgctgacgcctatgaaattggtcgtggttgggctcaaaccttcg
ccaaagacctggtacaggcgccaccgcgaagcagacgatggtgcgtccaagtcgaagttc
aagggcgtcctggcgtggtatccgagtacgccgagtgccggcgctccgcaggacacacag
accaacggcaagggccgtgcaacaaactccacagggactcatccgatactcatctatggc
tggggcaacaccttgaatctcgtgcaggtatcagagtcgaagatggtccaggaagtgcgc
aatccgaaaaatagcaaggtctcgcgtgtggagatcggccgagtggtgttcgaggaaggt
agaagttggaccgtgggtggtgatgcactcgctttacagtggcttaatcccaatcaagtc
atcgtactcacctccgccgcactcgaagtcttcgatattaacaccttcaagctcgttgag
catgtcccattcgatgcttggtctctagtgtctccaatcttaagtcacactaccaatggc
tcagtgcaatactcggacgctgtgacagaggtggcacacagcgtaagggtatacaagggc
aaaatcttcctgctgggtcagcatgaagttcgcgttgggacgctgcttacttgggccgat
cggattctttcgtttgtggagaacggcgatttcttaagcgccatcgaattggctcggtca
tactacgtcggcgaggcacccgggaacaggaatggccttccggacgattcacaagaactt
cagctcgtggtcggcgagaagatgcgtgatctcatggtcgcttcggcacgatacgctttc
gctgaagagcgtatgatggatgacactcatttcagtgccgatggccgtggcgtcgatcga
acgtcgctatttgagggactcgtgactacctgttcccgtgcttgcatcgccctaggcgaa
ttcgacctcctttttgaggatctctactcatactacgacgacaacggtatctcgcgcata
ttcttgacgcagctcgagccatttattatcgatggaaccgtccaccaagttcccccacga
ctaacacagaggctcgtgacgcttcacgaggagaatgggcggccagacttggccgaacgg
attatctggcacatcgacccggagtgtctggatatcaatcagtctatccaactctgtcaa
aaatatcacctctatgatgctctgctgtatgtgtacatgcgcgcaatgaaggactatgtg
tctccgcttgtcgagctcatagacctcatccgacaagttcagcggtaccgtcggcgacgc
gcggaagcttcgccgaattcaaaggcgcgcttgaacgatagcgatgtggaggacattgca
atcaacgcgtacaagatttacccctacctaggcaatgcgttggctggtctggcatatcca
agcggcgagccactgtcggaagacgacgctgaacaagccaaatacgacttgtacacattc
ctcttcgccgggcgatctagcatgtggcctgatccaggtggcagacttatcctcaccaat
gaagacgacacaaacgtcgaacccacttacccctatgctcgccttcttctgcgtttcgac
gctgaggcttttcttcacactcttgacctggcgtttgaagaccactatctcaacgacgat
gagaagcacaataccaaccgactcatcatcgtgaaaatactgcttgaaatcctgtcatcc
ccggacaccccacagaacgacgcgacgttcatcaacattttcatagcgaggaatatgccc
aagtacagccaatttctcaaggtggcgccgagtacacttcacagcattctcatcgccctg
gtacaggatcgagacagcagcacgcgggaagaccggcagctggcagccgagtatctacta
tctgcgtatacgccccatgagggagaccgtctcgtccgcatatttgagcgagccggcttc
taccgcatccttcgttcatggcatagacgtgaacaccaatgggtgccattgatccaggca
tacttgtgggatagtgacatccccccagcggagaaattcagctcgcttgatgaggtttta
tcgactacggcaaaatacaacaagcaggagtttcctccggaagttactgcgattatcaac
gagtcgctcccctccttactcgacgccagcatcccgcaaactgcacttcttcttgaccga
caccttcctgccctgcatgagacggtgataagcaccctcgctgaccgtccgtcccgagat
cgcttcctctatctgcggagtttactggcaacttcagcgcaagacagcttccaggagctg
ggattcactcgtgttgagccctctcccaacacccttccgagccttcgcaatgaatacctc
aggctgctatgcgaggtcgagcccggctatgtcgtcagcgagcttcatcatctgcctccc
aacttcattgatcgcaaggaagctgcgcggatatgtgaagaacaagggctctacgatgct
gtcatctggtgcatgaatgacgctggagacgcaaagggtgctttgcacaaggccgaccag
ttcgtggagaagctttcggatacgcttgtagagctcctgaaagctggagacgtctccgaa
cagagcaacgaatgcatatccgccctcaagaacatccaacgacgagctgtcggtgtctgc
ctcgagcagagcaagggcgcgacggaccagcatagcgaactcgagcagaactggctcgaa
cttctccggagtcagatcacttgcgtccatcgcgtttctctttcttgttcaccacaagtg
agctcagcgaagaccatagatgagggcgacgatccgcaactacgagcagagcgggctctg
ctagacgagttgcgtgcctctgtccatgagaccttcaactcgctgctgtctgttagctcg
actaaggctgtgtcattcccacggctgtttaaacgactcgtggatgccagggacagccgc
gttacaaaaggggcgcagtacaccgaattccgggccatcttgggtggaatgttggagtcg
taccgttctgagggcgacatgctggtgatcaccaagcacctcatgagccgcgattttttc
gtcttagtggaggagttagcaaaggctcgtagcaagggatgggcaccctcacgtggcatc
tgctcaacctgcggcgaacgattgtacgacgcgagcaagtcagcaaaagcctttgcagtt
agtggagaatcggagtcggtaccggaagattctgctattatcgtatcacggacaggagtt
gtataccataggaaatgcctacccagacaggacactactaatagcgtataa
DBGET
integrated database retrieval system
