Phanerochaete carnosa: PHACADRAFT_98717
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Entry
PHACADRAFT_98717 CDS
T03128
Name
(RefSeq) hypothetical protein
KO
K14772
U3 small nucleolar RNA-associated protein 20
Organism
pco
Phanerochaete carnosa
Brite
KEGG Orthology (KO) [BR:
pco00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pco03009
]
PHACADRAFT_98717
Ribosome biogenesis [BR:
pco03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
PHACADRAFT_98717
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UTP20_N
UTP20
UTP20_C
BP28CT
Motif
Other DBs
NCBI-GeneID:
18921022
NCBI-ProteinID:
XP_007398218
JGI:
Phaca1_98717
UniProt:
K5W315
LinkDB
All DBs
Position
Unknown
AA seq
2086 aa
AA seq
DB search
MVVQVLILHHAISLSDILPSLGPLLAIIVNTTVAAENPHDEYVERGTNSSWVIGSCLSCL
ARRNPTEWRSQVDINTWTTEIVKKWSWSGYALHGLVSIIQATQGPAERISSETVYDYLRT
SLLSHSRLLRLSMLHLLNSRVLNVGASAEVLKKCLQAEEVSIDVHGIRERVMRIGRLSHI
LKDGDEIGAEIAVRWLIAQLKVNLRPLWVPTSEALAAIAERFGDLTWNLLFEQLKAASLN
QLSEPSPAWMSVDDSDQDTIFEQERSWRDPSAHKLRSSVAKRLHGNAAKIIIVQAQVVEE
RFDQGNYELQLLNALCACSSLAERHNKDLVPHFLSLAPPDVPTKLARHKLSAWLTLFSKF
ANPKALHSTEGLYAMYTILLSHPDRQLQKLAVSCILTYKSPAFIAHQDSLYALLDDTRWR
DELTQLSIADIKDVERPEVIDTIIRLLFGVILERRGRGRGGDRRAAVLAALAGCRDEELY
TLVDLMLKPINESREVSDGGEYMTKPLADGVSSKKLVGFLTLLGDVTKNLGTRLINRWPI
LLATLLDLVGFAQGRLGSTAAEDVQEQDEDVSADDDQDVDQDADQEGPGSARAIRAVRQA
GIKRFTDFFRLPMTFDFSTYVKEAFKTFISPRLDALDTENTQAPSALLELFHAWSLKRDT
ARFLVDYDERTLPKIYDCLIATNVKPTVVSRVLDIVEHLLGHSEIDEDFLNAIFKPHVEL
LLTNFAVLMERTKAAVSMTDHIGRRQITILSSLAPYMADSRQASLLLNVFTPVLRRPTKL
VPEKVKVDMVNIVKSLFPVVVDLKDSASVTYTRTYALLSFLFQNLRSRPARISLVLTFRK
FAEIDSSLYSLAELLDSLNAWSTKRMEEPDFGRRIEAFVELNEKRHATLTAKEWLPILFN
MLNFVQEPEELTVRTNASHAMKRFLDRVEEIGGDYEATFNNTLYPGLKNSLRSKNELVRA
EILGIISYAAKKCERLSSLREMRVLLANGDEEANIFNNILHVQLHRRTRALRRLAELCIE
GALRSSTLTDIFIPLVGNFIVDGSSVDHHLVTEAIITTGKMARQLQWGAYYTLIQQYLRL
SRNKDVSERVYVRTLVALLDNFHFPMDVMVSSDEGEEQAVSEEGEEELPAERSDTAKKQA
HIAEIVSSRLLPNLISHLEKRDETEDSLRIPIAIGVVQVAMHLPLVARETQISRLLTVLS
QVFRSKSQDTRDLARETLCKIAIILGPSYLPLILRELRTALLRGPHLHILAYVAHALLIH
VTSGDHATTFSNLDDCVNDIAHVSAEVIFGESGKDVQSKDFKTKMREVRGSASKGLDSFA
LVAKHVTPPKISSLLVPVRNILQQTETLKVMQQIEDLLRRIAGGLNINQHLTSKDLLVLC
HTLISQNAKFLKQTPKAIPANEKTKGDALTEMKKHLTAQADHYANNSFRFVILGLELFNT
AYRRSRFDFKDPAVIARLEPMLSVIGNTLYSNHMQVVVSGLKATAAIVRCPLKSIVKSLP
VFIRQILQVIKQTGSTEAELVQIAFKSLAAILREQSAAQIKEKDLVFLLELLSPDLEEPS
RQAAVFIMLKAIVARKFVVPEIYDLMDRVSEIMVAGQSPSVQEQCRAILLQFLLDYPQGK
GRLRNHMTFLAKNLSYVYESGRKSVMELLSAILAKFDPALIREYSDLLFVALVLVIANDE
SSKCREMASELVKNLFVRLDEVQRRVVMTHVHTWASQRAQPQLARVSSQIYSILIEHLRG
DVAQYARAILEDLNSILDSTCELFEQEDDNAAMDVDIEWQIPYQALNALSKLLRVLTDLV
PQLDEVAWPGIAKLLLFPHAWVRTAACRLLGVLFSAVPAASPRGDLSDSSPLSLAGMEEV
ARKLCLQLRSEHLDAALSLQIVKNLFYVSKCFAMYEATLPAEDDGEEEQEKESSTRRPLS
WLFSKLSFQARSAHIARRNKSSSPDNWYHQPISVLRWFAAMASFMEPSQVEKFLVHILSP
VYRIAEDDTIRDSHMDELKTTAVELQELVQNKVGTTKFAEIYGRIRQNILGVRRERRTAR
AVQAAKSPALASKKKAQRNVAKKESRKRKNSTFAEGRGKFKRRRDE
NT seq
6261 nt
NT seq
+upstream
nt +downstream
nt
atggttgtgcaggttcttattcttcatcacgctatctccctatccgacatactaccctct
ctaggacctctactggctattattgtcaacactacagttgccgcggaaaacccacatgac
gaatacgttgaacggggcacgaactcgtcgtgggtcatcggttcctgcttatcatgtctg
gctcgccggaatccgaccgaatggcgtagtcaggttgacattaatacttggacaacggaa
attgtgaagaagtggagctggtcaggatacgccctccatggacttgtgtcgattattcaa
gcgacacaaggacctgcagagcgaatctcatccgagacagtttacgactatctgcggaca
tcgctcctctcgcattctcgcctgctcaggctgtcgatgcttcatctgcttaattcgcgc
gttttgaacgtgggagcttctgccgaagtcttgaagaagtgcttacaggcggaggaagtc
agcattgacgtgcacggcattcgcgaacgtgtcatgagaataggacggttgagtcacatc
ctcaaggacggcgacgagatcggtgccgagattgctgtcaggtggctaatagcacaactc
aaggtcaacctacgtccactctgggttcctacctccgaagccctcgctgcgatagcggaa
cggtttggtgatttgacctggaacctgctgttcgagcaactgaaagctgcatcattgaac
cagctctcggagccctcccctgcctggatgtctgtggatgatagcgatcaggacacaatt
tttgagcaagagcggtcctggagggatcctagtgcacacaagttgcggtcaagcgtagcc
aagcgacttcatggtaatgctgcaaaaattatcatcgtacaggctcaagttgtagaagaa
cgtttcgatcagggaaactacgagctccagctcctgaatgcgctctgtgcctgctcctcc
ctcgctgagaggcacaacaaggatctggttccccacttcctctcccttgctccgccggac
gtacctaccaagcttgctcgccataagcttagcgcttggctcaccttattctcgaagttt
gccaacccgaaggctctccattcgaccgaagggttatacgcaatgtacaccatcctcctc
tcacacccagatcgccagctgcagaaacttgcagtgtcgtgcatcctcacgtacaagtcc
cctgccttcattgcgcaccaggactccctttatgcgctgcttgatgacacccgatggcgc
gacgagctgacacagctgagcatcgctgatatcaaggatgtcgaacgtccagaggtaatt
gataccattatccgattactcttcggtgttatactcgagcggcgcgggcgcggtagaggt
ggtgatcgccgtgcggccgtcctggctgctctcgcaggatgccgcgatgaagagctatac
actcttgttgatcttatgctcaagcccatcaacgaaagtcgtgaggtcagcgacggtggg
gaatacatgactaagcctttggcggacggtgtatcaagcaagaagcttgttggtttccta
acgctgctgggtgacgtcaccaagaaccttggcacccgcttgatcaacaggtggcctatc
cttttggcgaccctcctcgatctcgtgggcttcgctcaaggtcgtctcggttccacggct
gcagaagacgtgcaggagcaagacgaagacgtgagcgcagatgatgaccaagatgtcgac
caagatgccgaccaagaaggcccaggttctgctcgtgcgattcgtgccgtccggcaggct
ggcatcaagcggttcaccgatttcttccgcctacctatgactttcgacttcagcacgtat
gtcaaggaggcgttcaagacattcatctctccacgtctcgatgctttggacaccgaaaat
acacaggcgccttctgcgcttctggagctcttccatgcgtggtccctcaaacgggatact
gcccgcttcctggttgattatgacgagcgtaccctcccaaagatctatgactgtctgatt
gctaccaatgtgaaacctaccgtcgtttcccgggtcctggacatcgtcgagcacctgctc
ggtcactcggagatagatgaggattttctgaacgccattttcaagccccatgtcgaactc
ctcctgacgaacttcgcggttctcatggaacgcacgaaagcggcggtgtccatgacagat
catatcggtcgcaggcaaattaccatcttgtcttcgctggctccgtacatggcagactca
agacaagcgtcgctcttactcaacgttttcactcccgtcctccgcaggccgacgaagtta
gtccccgagaaggtcaaggtcgatatggtcaacatcgtgaagagccttttccccgtcgtt
gtcgatctgaaagattctgcaagtgtgacatatacgaggacgtatgcattgctatcattc
ctcttccaaaatttacgctcgcggccggctcgcatctctctggtgctgacattccgcaag
ttcgccgagatcgattcttctttgtactcccttgccgaacttttggactccctcaatgca
tggtcgacgaagcgtatggaggagcctgacttcggcaggcgaatcgaggccttcgtggag
ctgaatgagaaaaggcatgcaacactgacagcgaaagaatggcttccgatcctcttcaac
atgctcaacttcgttcaggagcccgaggagctgacagtgagaaccaacgcctcgcatgcc
atgaagcgcttcctggaccgcgtcgaagaaattgggggcgactacgaggcaacattcaat
aatacgctctaccccggactcaagaacagtctgcgttcgaagaatgagctcgtccgcgca
gagattctagggatcatctcctacgcggcgaagaagtgcgagcgtctctcctcgttgcgg
gagatgcgtgtcctgctcgcgaacggtgacgaggaggctaacatattcaacaacatcttg
catgtccagcttcataggcgcaccagggcattgcgccgtctcgcagagttatgtattgaa
ggcgcacttcgtagctcgacccttaccgatatctttatacctcttgtcggtaacttcatc
gtcgacgggagctctgtggatcaccacctcgtgacagaggccatcataacaacaggaaag
atggcgagacagcttcagtggggtgcctactacacactcatccaacaataccttcgactc
tcgcgcaacaaggatgtctcagagcgcgtttatgtccgcactcttgttgcgctcctagac
aacttccactttcccatggacgttatggtctcgagcgatgagggagaagaacaagccgtg
tcagaggaaggagaggaagagctacccgcagagcgatcagacactgcgaagaagcaggcc
catatcgccgagatcgtcagctcgcgtcttctgcccaacctcatctcgcatctggagaaa
cgtgacgagactgaggacagtcttcgaattccaattgcgatcggtgttgttcaagtcgcc
atgcaccttcccctggtggctcgagagacccagatctctcgtcttctgacggtccttagc
caggtgttccgaagcaagtcgcaggacacgagagacctagcgcgcgagacgctgtgcaag
atcgcgataatcttggggccatcgtaccttcccctcatcttgcgcgagctcaggacggct
cttctgcgaggaccccacctacacattctggcgtacgtcgcacatgccctgttgatccac
gtcacttctggagaccacgccacgaccttctccaatctagatgattgcgttaacgacatc
gcccacgtctctgcagaagtcatcttcggcgaatcgggcaaggatgtccagtccaaggat
ttcaagaccaaaatgcgcgaagtacgcgggtctgcatccaaaggcctagactcattcgct
cttgtcgctaagcatgtcactcctccgaaaatcagtagcctgctggttcccgtgcgcaac
attcttcagcagaccgaaacgctcaaagtcatgcagcaaatcgaggatctcctgcgtagg
attgcgggtggtctcaatatcaaccagcacttgacgtctaaggacctcctcgtcctttgc
cacacgctcattagccaaaacgcgaaattcctcaagcaaacgcccaaggcgattcctgcg
aatgaaaagacgaagggcgacgcgctaacagaaatgaagaagcatttgactgcgcaggcc
gaccattatgcgaacaactcgttcaggttcgtcattttgggtctcgagttgttcaacact
gcctatcggaggagccgtttcgatttcaaagaccctgcggtcatcgctcgtctggagccc
atgctctctgtcatcggcaacacgctctattcgaatcacatgcaggtggtcgtctccggc
ttaaaggccaccgctgcgatcgtcagatgccctctgaaatcgattgtcaagtctcttcct
gtcttcattcgccagattctacaggtcatcaagcagactggatcgaccgaggctgaactt
gtgcagattgcgttcaagtccctggccgccatccttcgggaacaatctgcggcgcaaatc
aaggagaaggacctcgtcttcctacttgagctgctttcgcctgatctagaagagcccagc
cgtcaggctgcggtgttcattatgctgaaggctattgtcgcccgcaagttcgtcgtaccc
gagatttacgatctcatggaccgcgtctcggagattatggttgctggtcagtcgccttct
gtccaggagcagtgccgtgccatccttcttcaattcctcctggattatccccaaggcaaa
ggccgtctccgcaaccacatgacattcctggcgaagaacctgtcatacgtgtacgagagc
ggtcggaaatcggtcatggagctcctcagcgcgattctcgcgaagttcgaccctgccctc
attcgcgagtactccgaccttctgttcgtcgccttggtcctcgtgatcgccaatgacgag
tcctcgaagtgcagagagatggcttcggagctggtgaaaaatctctttgttcgcctggac
gaagtccagcgacgcgtcgtcatgacacacgtccatacttgggcctcacagcgtgcacag
ccacagcttgctagagtttcttcacagatctacagcattctgatcgagcatttgcgggga
gacgtcgcgcagtacgccagagctatcctcgaagacctcaactccattctcgactcgacg
tgcgagctgttcgagcaggaagacgacaacgctgccatggacgttgacatcgaatggcaa
atcccctaccaggcgctcaacgcgctgtcgaagctcctgcgcgtgctcaccgatcttgtg
ccccagttggacgaagtcgcttggccgggtattgccaagctgctcttgttccctcacgcc
tgggtgcgtacggctgcatgccgtctgctcggcgtcctgttttccgctgtacccgctgca
tcaccccgtggggacctcagtgacagctcgccgttgtctcttgctggcatggaggaggtc
gctcggaaactgtgcttgcagctccgaagcgagcatctcgacgctgcgctcagcctgcag
attgtcaagaacttgttctacgttagcaagtgcttcgccatgtatgaggcgaccttgcct
gcagaagacgatggagaggaggaacaggagaaagagtcttcgacgagacgtccactgtcg
tggctcttctctaagctatccttccaagccagatccgcgcacatcgcgaggagaaacaaa
tcctccagcccggacaactggtaccatcagcctatatctgttcttcgctggtttgctgca
atggcctctttcatggagccgtcgcaagtggagaagttcctggtgcatatcctttcgcct
gtctaccgcatcgccgaagacgacactatccgcgattcgcacatggatgaacttaagacc
actgcggtcgagcttcaggagcttgtgcaaaacaaggtcggcacaaccaagttcgcggag
atctatggccgcatcaggcagaacatcctgggtgtgcgtcgggaacgcaggacagcgcgt
gcagtccaggcagcaaaaagtccagcgttggcgtcgaagaagaaagcgcagaggaacgtg
gcaaagaaggagagccggaaacgcaaaaacagcaccttcgccgaggggcgaggcaagttc
aaaaggcgcagggacgagtag
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